Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

Click here to switch to the map view.

The map label for this gene is 83594616

Identifier: 83594616

GI number: 83594616

Start: 3782459

End: 3782908

Strand: Direct

Name: 83594616

Synonym: Rru_A3286

Alternate gene names: NA

Gene position: 3782459-3782908 (Clockwise)

Preceding gene: 83594614

Following gene: 83594617

Centisome position: 86.9

GC content: 67.11

Gene sequence:

>450_bases
GTGGGCTTCAAGATGAACGCGGGTCGCGGCGGACTGCGGCGGGGGTGGATTTACTCTTTCGGGCGAGCAAGGCTGATGAG
CGTGTGGAAAGCTGATATGTCCTTTGAACCAAACAGTGATCGGGGCTCTTTGAATTTGGCGGGGGCCGACCAGGGGGACG
ACCGCGGCCGCCCGGCTTCGACTCCCGAGCCCGTCCGCCGGCCGACGCCCGGAGAAGAGCGGTGGCTGGGAACCTATCTG
CGTCGGGCTTATGACGACGTGGTCGACGAACCCCTGCCCGACAGCTTCAACAGCCTTTTGAAGCAGCTCGAGCAAATGGA
TTCGCCCGGATCGCTCGATATGCCCCCCGTTGGCCGTCCCGACGAGGACGCCTCCGCCGGAACCGGGGACCCGCCCTCGG
ATGCCGCGGAGGCCACCCCCCAGGACGCCCCCCCCGCACGCGACCGCTGA

Upstream 100 bases:

>100_bases
TGAAGGACGAAGCGGCCTTGAGACCTATAAAAATCCGTTTTCTTTCAAGGAACATTCCCCGTCCTGGCGGCAGGCGGGAG
AAGATCTTGGGACGCTCGTC

Downstream 100 bases:

>100_bases
CGGAAGGCTTTTCCATGACCCATCGCTCCGCGCCCCGCAACGGGCTCGCCTCGGCCAGCTTTTCCCAGTCCCCGGCCCCG
CCTGTGGCGCCCGGCGCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MGFKMNAGRGGLRRGWIYSFGRARLMSVWKADMSFEPNSDRGSLNLAGADQGDDRGRPASTPEPVRRPTPGEERWLGTYL
RRAYDDVVDEPLPDSFNSLLKQLEQMDSPGSLDMPPVGRPDEDASAGTGDPPSDAAEATPQDAPPARDR

Sequences:

>Translated_149_residues
MGFKMNAGRGGLRRGWIYSFGRARLMSVWKADMSFEPNSDRGSLNLAGADQGDDRGRPASTPEPVRRPTPGEERWLGTYL
RRAYDDVVDEPLPDSFNSLLKQLEQMDSPGSLDMPPVGRPDEDASAGTGDPPSDAAEATPQDAPPARDR
>Mature_148_residues
GFKMNAGRGGLRRGWIYSFGRARLMSVWKADMSFEPNSDRGSLNLAGADQGDDRGRPASTPEPVRRPTPGEERWLGTYLR
RAYDDVVDEPLPDSFNSLLKQLEQMDSPGSLDMPPVGRPDEDASAGTGDPPSDAAEATPQDAPPARDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16247; Mature: 16116

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFKMNAGRGGLRRGWIYSFGRARLMSVWKADMSFEPNSDRGSLNLAGADQGDDRGRPAS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCC
TPEPVRRPTPGEERWLGTYLRRAYDDVVDEPLPDSFNSLLKQLEQMDSPGSLDMPPVGRP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
DEDASAGTGDPPSDAAEATPQDAPPARDR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GFKMNAGRGGLRRGWIYSFGRARLMSVWKADMSFEPNSDRGSLNLAGADQGDDRGRPAS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCC
TPEPVRRPTPGEERWLGTYLRRAYDDVVDEPLPDSFNSLLKQLEQMDSPGSLDMPPVGRP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
DEDASAGTGDPPSDAAEATPQDAPPARDR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA