| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594616
Identifier: 83594616
GI number: 83594616
Start: 3782459
End: 3782908
Strand: Direct
Name: 83594616
Synonym: Rru_A3286
Alternate gene names: NA
Gene position: 3782459-3782908 (Clockwise)
Preceding gene: 83594614
Following gene: 83594617
Centisome position: 86.9
GC content: 67.11
Gene sequence:
>450_bases GTGGGCTTCAAGATGAACGCGGGTCGCGGCGGACTGCGGCGGGGGTGGATTTACTCTTTCGGGCGAGCAAGGCTGATGAG CGTGTGGAAAGCTGATATGTCCTTTGAACCAAACAGTGATCGGGGCTCTTTGAATTTGGCGGGGGCCGACCAGGGGGACG ACCGCGGCCGCCCGGCTTCGACTCCCGAGCCCGTCCGCCGGCCGACGCCCGGAGAAGAGCGGTGGCTGGGAACCTATCTG CGTCGGGCTTATGACGACGTGGTCGACGAACCCCTGCCCGACAGCTTCAACAGCCTTTTGAAGCAGCTCGAGCAAATGGA TTCGCCCGGATCGCTCGATATGCCCCCCGTTGGCCGTCCCGACGAGGACGCCTCCGCCGGAACCGGGGACCCGCCCTCGG ATGCCGCGGAGGCCACCCCCCAGGACGCCCCCCCCGCACGCGACCGCTGA
Upstream 100 bases:
>100_bases TGAAGGACGAAGCGGCCTTGAGACCTATAAAAATCCGTTTTCTTTCAAGGAACATTCCCCGTCCTGGCGGCAGGCGGGAG AAGATCTTGGGACGCTCGTC
Downstream 100 bases:
>100_bases CGGAAGGCTTTTCCATGACCCATCGCTCCGCGCCCCGCAACGGGCTCGCCTCGGCCAGCTTTTCCCAGTCCCCGGCCCCG CCTGTGGCGCCCGGCGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MGFKMNAGRGGLRRGWIYSFGRARLMSVWKADMSFEPNSDRGSLNLAGADQGDDRGRPASTPEPVRRPTPGEERWLGTYL RRAYDDVVDEPLPDSFNSLLKQLEQMDSPGSLDMPPVGRPDEDASAGTGDPPSDAAEATPQDAPPARDR
Sequences:
>Translated_149_residues MGFKMNAGRGGLRRGWIYSFGRARLMSVWKADMSFEPNSDRGSLNLAGADQGDDRGRPASTPEPVRRPTPGEERWLGTYL RRAYDDVVDEPLPDSFNSLLKQLEQMDSPGSLDMPPVGRPDEDASAGTGDPPSDAAEATPQDAPPARDR >Mature_148_residues GFKMNAGRGGLRRGWIYSFGRARLMSVWKADMSFEPNSDRGSLNLAGADQGDDRGRPASTPEPVRRPTPGEERWLGTYLR RAYDDVVDEPLPDSFNSLLKQLEQMDSPGSLDMPPVGRPDEDASAGTGDPPSDAAEATPQDAPPARDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16247; Mature: 16116
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFKMNAGRGGLRRGWIYSFGRARLMSVWKADMSFEPNSDRGSLNLAGADQGDDRGRPAS CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCC TPEPVRRPTPGEERWLGTYLRRAYDDVVDEPLPDSFNSLLKQLEQMDSPGSLDMPPVGRP CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC DEDASAGTGDPPSDAAEATPQDAPPARDR CCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GFKMNAGRGGLRRGWIYSFGRARLMSVWKADMSFEPNSDRGSLNLAGADQGDDRGRPAS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCC TPEPVRRPTPGEERWLGTYLRRAYDDVVDEPLPDSFNSLLKQLEQMDSPGSLDMPPVGRP CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC DEDASAGTGDPPSDAAEATPQDAPPARDR CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA