Click here to switch to the map view.

The map label for this gene is csaA [H]

Identifier: 83594614

GI number: 83594614

Start: 3780755

End: 3781090

Strand: Direct

Name: csaA [H]

Synonym: Rru_A3284

Alternate gene names: 83594614

Gene position: 3780755-3781090 (Clockwise)

Preceding gene: 83594613

Following gene: 83594616

Centisome position: 86.86

GC content: 63.39

Gene sequence:

>336_bases
ATGACCATCTCTTATGCCGATTTCGAAAAGATCGATATCCGGGTGGGGACGGTGATCGAAGCCCTGCCCTTCCCGGAGGC
GCGCAAGCCCGCCATCCGCCTGCGCATCGACTTCGGCGACGAGATCGGCGTGAAACGCAGTTCCGCCCAGTTGACCGCCC
ATTACACCCCCGAGGGATTGGTCGGTCGCCAGGTCATCGCCGTGGTCAATTTCCCGGCCAAGCAGATCGGCAAGACGGTC
AGCGATTGCCTAGTCCTCGGCGTCCCCGATCCGGCGGGCGAACCGGTTCTGCTCATCCCCGACCATCTGGTCTCCGACGG
CGGCCGGCTGTTTTAG

Upstream 100 bases:

>100_bases
GTTATGCCCAAAGGGCATTTGCCCGAAGCGAATCCCAAAGCGAACCGCGTTAAACGCCCCTCTTCTTTGACGCGGTTCGC
TTTACAGCGAGAGGCTCGCG

Downstream 100 bases:

>100_bases
GGCAGCCCGCCGAAACCCGCCCGTGAAAACCCAAAAAGGGGAGCGCGAGGCTCCCCCTTTCGGGTTTTTTTCGTTCCAGG
GCCGATGGTTCTATCGCGCC

Product: secretion chaperone CsaA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MTISYADFEKIDIRVGTVIEALPFPEARKPAIRLRIDFGDEIGVKRSSAQLTAHYTPEGLVGRQVIAVVNFPAKQIGKTV
SDCLVLGVPDPAGEPVLLIPDHLVSDGGRLF

Sequences:

>Translated_111_residues
MTISYADFEKIDIRVGTVIEALPFPEARKPAIRLRIDFGDEIGVKRSSAQLTAHYTPEGLVGRQVIAVVNFPAKQIGKTV
SDCLVLGVPDPAGEPVLLIPDHLVSDGGRLF
>Mature_110_residues
TISYADFEKIDIRVGTVIEALPFPEARKPAIRLRIDFGDEIGVKRSSAQLTAHYTPEGLVGRQVIAVVNFPAKQIGKTVS
DCLVLGVPDPAGEPVLLIPDHLVSDGGRLF

Specific function: Could serves as a molecular chaperone for exported proteins or alternatively acts by stabilizing the secA protein [H]

COG id: COG0073

COG function: function code R; EMAP domain

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 tRNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR008231
- InterPro:   IPR002547 [H]

Pfam domain/function: PF01588 tRNA_bind [H]

EC number: NA

Molecular weight: Translated: 11995; Mature: 11864

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: PS50886 TRBD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISYADFEKIDIRVGTVIEALPFPEARKPAIRLRIDFGDEIGVKRSSAQLTAHYTPEGL
CCCCCCCCEEEEEEECCEEEECCCCCCCCCEEEEEEECCCCCCCEECCCEEEEEECCCCC
VGRQVIAVVNFPAKQIGKTVSDCLVLGVPDPAGEPVLLIPDHLVSDGGRLF
CCCEEEEEEECCHHHHCCCHHHEEEEECCCCCCCCEEEECHHHHCCCCCCC
>Mature Secondary Structure 
TISYADFEKIDIRVGTVIEALPFPEARKPAIRLRIDFGDEIGVKRSSAQLTAHYTPEGL
CCCCCCCEEEEEEECCEEEECCCCCCCCCEEEEEEECCCCCCCEECCCEEEEEECCCCC
VGRQVIAVVNFPAKQIGKTVSDCLVLGVPDPAGEPVLLIPDHLVSDGGRLF
CCCEEEEEEECCHHHHCCCHHHEEEEECCCCCCCCEEEECHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1435734; 9384377 [H]