| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83594613
Identifier: 83594613
GI number: 83594613
Start: 3780097
End: 3780573
Strand: Direct
Name: 83594613
Synonym: Rru_A3283
Alternate gene names: NA
Gene position: 3780097-3780573 (Clockwise)
Preceding gene: 83594612
Following gene: 83594614
Centisome position: 86.84
GC content: 59.75
Gene sequence:
>477_bases ATGGCCAAGCAACCCGAGACCTTCCTTGACTTTGACTTCACGCGCTATTTCGCCGACCTCAAAGTCCCCGGGGTTGACGT CGAAAGCCTTATCGCCAGCCAGAAGCGCAACCTTGACGCGCTGACCAACGCCAATAAGCTGGCCTTCGAAGGCGTGCAGG CGATCTTCAAGCGTCAGGCCGAGATCCTTCGCCAGTCGGTCGAGGAATCCGCCCAGGCCGCCCAGGACATCGCCAAGGCC GAAACGCCCCAGGACAAGATCGCCAAGCAGACCGAAGTGGCCAAGGAAAGCTTCGAAAAAAGCGTGGCCAACCTGCGCGA ACTGGTCGAATTGCTGGCCAAATCCAACACCGAGGTTTTCAATCTGCTGAATTCGCGGGTCAGCGAAGTGCTCGACGAGG CCAAGGATCTGGTGGTCAAGCAGCAGAACGCCACGGTCAAGACTCCGGCGCCGCGCGCCGCGACCACCCAGAAGTAA
Upstream 100 bases:
>100_bases TTGCGGTGCAAAAAAACGCGTTGACTCAAGGGGGCCCAGTTCCTAGGGTCTTGGGGTTAAAGCCTTTCCGCACCGCCATT TTCGCAGGGAGAGATACGAG
Downstream 100 bases:
>100_bases GCCTCTGTCTCGGCGTTTTCCCTCGAACTCTCAGCGATAAACCGGGAGGTTCGGCCATAAGGCCGTTCCTCCGCTGTGTT TGTTATGCCCAAAGGGCATT
Product: phasin
Products: NA
Alternate protein names: Phasin; Magnetic Particle Membrane Specific GTPase P
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MAKQPETFLDFDFTRYFADLKVPGVDVESLIASQKRNLDALTNANKLAFEGVQAIFKRQAEILRQSVEESAQAAQDIAKA ETPQDKIAKQTEVAKESFEKSVANLRELVELLAKSNTEVFNLLNSRVSEVLDEAKDLVVKQQNATVKTPAPRAATTQK
Sequences:
>Translated_158_residues MAKQPETFLDFDFTRYFADLKVPGVDVESLIASQKRNLDALTNANKLAFEGVQAIFKRQAEILRQSVEESAQAAQDIAKA ETPQDKIAKQTEVAKESFEKSVANLRELVELLAKSNTEVFNLLNSRVSEVLDEAKDLVVKQQNATVKTPAPRAATTQK >Mature_157_residues AKQPETFLDFDFTRYFADLKVPGVDVESLIASQKRNLDALTNANKLAFEGVQAIFKRQAEILRQSVEESAQAAQDIAKAE TPQDKIAKQTEVAKESFEKSVANLRELVELLAKSNTEVFNLLNSRVSEVLDEAKDLVVKQQNATVKTPAPRAATTQK
Specific function: Unknown
COG id: COG5490
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17538; Mature: 17407
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKQPETFLDFDFTRYFADLKVPGVDVESLIASQKRNLDALTNANKLAFEGVQAIFKRQA CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHH EILRQSVEESAQAAQDIAKAETPQDKIAKQTEVAKESFEKSVANLRELVELLAKSNTEVF HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH NLLNSRVSEVLDEAKDLVVKQQNATVKTPAPRAATTQK HHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCC >Mature Secondary Structure AKQPETFLDFDFTRYFADLKVPGVDVESLIASQKRNLDALTNANKLAFEGVQAIFKRQA CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHH EILRQSVEESAQAAQDIAKAETPQDKIAKQTEVAKESFEKSVANLRELVELLAKSNTEVF HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH NLLNSRVSEVLDEAKDLVVKQQNATVKTPAPRAATTQK HHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA