| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is hisC
Identifier: 83594594
GI number: 83594594
Start: 3762915
End: 3764021
Strand: Reverse
Name: hisC
Synonym: Rru_A3264
Alternate gene names: 83594594
Gene position: 3764021-3762915 (Counterclockwise)
Preceding gene: 83594595
Following gene: 83594593
Centisome position: 86.47
GC content: 67.03
Gene sequence:
>1107_bases ATGACCAAAGCGATTATTCCTCAGCCCCGTCCCGGCATCATGGAGATCAGCCCCTATGTCGGGGGCGAGTCCAAGCTGGC CGGTGTCGATCGGATCATCAAGCTGTCGTCCAACGAGGGCGCCCTGGGGGCGAGCCCGCGGGTGCGCGACGCGCTGATCG CTTCGGCCGGCGAGGCCCATCGCTATCCCGACGGCAACGCCACCGCCCTGCGCGAGGCCCTGGGGCGCACCCATGGCCTT GATCCGGCGCGCATCGTCTGCGGCGCCGGGTCCGATGAACTGATCGGTCTTTTGTGCCGCGCCTATGCCGGCCCGGGCGA TAGCATCGTGCAAAGCGCCTATGGCTTCCTGATGTATGGCATCTATGCGCGCGGCGTCGGGGCCGAGCCGATTCTCGCCC CGGAAAGCGATCTGACGGCCGATATCGACGCCATGCTGGCCGCCGTGCGCGACACCACCAAGCTGGTGTTCCTGGCCAAT CCCAATAATCCGACCGGCACCTGCCTGCCGACCTCGGAAGTCGTGCGCCTGCGCGAGGGCCTGCGCGACGACATCATCCT GGTCGTCGACGCCGCCTATGCGGAATATGTCGAGCGCAACGATTACGACGCGGGCGCCCGGCTGGTCGACAGCCACCCCA ATACGGTGATGCTGCGCACTTTCTCGAAGATCGGCTTGGGCGGTCTGCGGCTGGGCTGGAGCTATGGCCCGGCCCATATC ATCGACGTTCTCAACCGCGTGCGCGGGCCGTTCAATATTTGCGGTCAGGCGCTGGTGGCCGGCGAAGCGGCGCTGGCGGA CCCGGCCTTTACCGATCTGTCGCGGGCCCATAATTCCCTGTGGCGGGAGTGGACGCGCGCAAAACTGCAGGCGATGGGCA TCCGGGTTGGCGAGTCCTCGGGCAATTTCGTTCTTGCCACCTTCGATGCCGAAGGCCCCTTCACCGCCCTGGCCGCCGAC GCCGCCTTGCGCCAGCAGGGCATCATCTGCCGCCGGGTGGCGGGCTATGGCCTGCCCAACTGCCTGCGCATCACCATCGG CCGCGATGACGAGATGCAGGCGGTGGTCGAAGCCCTTGGCGCCTTCATGGCTGGCGAGGGGCGGTGA
Upstream 100 bases:
>100_bases GAGATCAAAGTTTCCGCGTTAAAGGGGTAGCATTTAACGCGGTTTGATCGAGGCGCGCCCACGATCCTTGTCGTTTTCCG TCCAGCGAAGGCATCGGACC
Downstream 100 bases:
>100_bases CGACGGCGCCGTCCTCTGCGCTGTTTGACCGCGTCGCCCTGATCGGCGTTGGGCTGATCGGGTCGTCGCTGGCCCGCGCC ATCAGGCGCCATGGGCTGGC
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MTKAIIPQPRPGIMEISPYVGGESKLAGVDRIIKLSSNEGALGASPRVRDALIASAGEAHRYPDGNATALREALGRTHGL DPARIVCGAGSDELIGLLCRAYAGPGDSIVQSAYGFLMYGIYARGVGAEPILAPESDLTADIDAMLAAVRDTTKLVFLAN PNNPTGTCLPTSEVVRLREGLRDDIILVVDAAYAEYVERNDYDAGARLVDSHPNTVMLRTFSKIGLGGLRLGWSYGPAHI IDVLNRVRGPFNICGQALVAGEAALADPAFTDLSRAHNSLWREWTRAKLQAMGIRVGESSGNFVLATFDAEGPFTALAAD AALRQQGIICRRVAGYGLPNCLRITIGRDDEMQAVVEALGAFMAGEGR
Sequences:
>Translated_368_residues MTKAIIPQPRPGIMEISPYVGGESKLAGVDRIIKLSSNEGALGASPRVRDALIASAGEAHRYPDGNATALREALGRTHGL DPARIVCGAGSDELIGLLCRAYAGPGDSIVQSAYGFLMYGIYARGVGAEPILAPESDLTADIDAMLAAVRDTTKLVFLAN PNNPTGTCLPTSEVVRLREGLRDDIILVVDAAYAEYVERNDYDAGARLVDSHPNTVMLRTFSKIGLGGLRLGWSYGPAHI IDVLNRVRGPFNICGQALVAGEAALADPAFTDLSRAHNSLWREWTRAKLQAMGIRVGESSGNFVLATFDAEGPFTALAAD AALRQQGIICRRVAGYGLPNCLRITIGRDDEMQAVVEALGAFMAGEGR >Mature_367_residues TKAIIPQPRPGIMEISPYVGGESKLAGVDRIIKLSSNEGALGASPRVRDALIASAGEAHRYPDGNATALREALGRTHGLD PARIVCGAGSDELIGLLCRAYAGPGDSIVQSAYGFLMYGIYARGVGAEPILAPESDLTADIDAMLAAVRDTTKLVFLANP NNPTGTCLPTSEVVRLREGLRDDIILVVDAAYAEYVERNDYDAGARLVDSHPNTVMLRTFSKIGLGGLRLGWSYGPAHII DVLNRVRGPFNICGQALVAGEAALADPAFTDLSRAHNSLWREWTRAKLQAMGIRVGESSGNFVLATFDAEGPFTALAADA ALRQQGIICRRVAGYGLPNCLRITIGRDDEMQAVVEALGAFMAGEGR
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=310, Percent_Identity=30.6451612903226, Blast_Score=117, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6322075, Length=382, Percent_Identity=27.7486910994764, Blast_Score=113, Evalue=4e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS8_RHORT (Q2RP86)
Other databases:
- EMBL: CP000230 - RefSeq: YP_428346.1 - ProteinModelPortal: Q2RP86 - SMR: Q2RP86 - STRING: Q2RP86 - GeneID: 3836711 - GenomeReviews: CP000230_GR - KEGG: rru:Rru_A3264 - NMPDR: fig|1085.1.peg.905 - eggNOG: COG0079 - HOGENOM: HBG646350 - OMA: HNIREAN - PhylomeDB: Q2RP86 - ProtClustDB: PRK02731 - BioCyc: RRUB269796:RRU_A3264-MONOMER - HAMAP: MF_01023 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 39049; Mature: 38918
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKAIIPQPRPGIMEISPYVGGESKLAGVDRIIKLSSNEGALGASPRVRDALIASAGEAH CCCCCCCCCCCCCEEECCCCCCCHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHCCCCCC RYPDGNATALREALGRTHGLDPARIVCGAGSDELIGLLCRAYAGPGDSIVQSAYGFLMYG CCCCCCHHHHHHHHHHHCCCCHHEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IYARGVGAEPILAPESDLTADIDAMLAAVRDTTKLVFLANPNNPTGTCLPTSEVVRLREG HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHC LRDDIILVVDAAYAEYVERNDYDAGARLVDSHPNTVMLRTFSKIGLGGLRLGWSYGPAHI CCCCEEEEEEHHHHHHHHHCCCCCCCEEECCCCCEEEEEEHHHHCCCCEEECCCCCHHHH IDVLNRVRGPFNICGQALVAGEAALADPAFTDLSRAHNSLWREWTRAKLQAMGIRVGESS HHHHHHCCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCC GNFVLATFDAEGPFTALAADAALRQQGIICRRVAGYGLPNCLRITIGRDDEMQAVVEALG CCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHH AFMAGEGR HHHCCCCC >Mature Secondary Structure TKAIIPQPRPGIMEISPYVGGESKLAGVDRIIKLSSNEGALGASPRVRDALIASAGEAH CCCCCCCCCCCCEEECCCCCCCHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHCCCCCC RYPDGNATALREALGRTHGLDPARIVCGAGSDELIGLLCRAYAGPGDSIVQSAYGFLMYG CCCCCCHHHHHHHHHHHCCCCHHEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IYARGVGAEPILAPESDLTADIDAMLAAVRDTTKLVFLANPNNPTGTCLPTSEVVRLREG HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHC LRDDIILVVDAAYAEYVERNDYDAGARLVDSHPNTVMLRTFSKIGLGGLRLGWSYGPAHI CCCCEEEEEEHHHHHHHHHCCCCCCCEEECCCCCEEEEEEHHHHCCCCEEECCCCCHHHH IDVLNRVRGPFNICGQALVAGEAALADPAFTDLSRAHNSLWREWTRAKLQAMGIRVGESS HHHHHHCCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCC GNFVLATFDAEGPFTALAADAALRQQGIICRRVAGYGLPNCLRITIGRDDEMQAVVEALG CCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHH AFMAGEGR HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA