| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is tyrC [H]
Identifier: 83594593
GI number: 83594593
Start: 3762022
End: 3762918
Strand: Reverse
Name: tyrC [H]
Synonym: Rru_A3263
Alternate gene names: 83594593
Gene position: 3762918-3762022 (Counterclockwise)
Preceding gene: 83594594
Following gene: 83594592
Centisome position: 86.45
GC content: 68.56
Gene sequence:
>897_bases GTGACGACGGCGCCGTCCTCTGCGCTGTTTGACCGCGTCGCCCTGATCGGCGTTGGGCTGATCGGGTCGTCGCTGGCCCG CGCCATCAGGCGCCATGGGCTGGCCCGCACCATCGCCGTGGCCGATCAGGGCGAGGGCGTCGCCGCCCGCGCCCTGGCCC TGGGTCTGTGCGACGAGGCGGGCGAGGATGCGGTGGCCGCCGTGCGCGGTGCCGATCTGGTGATGCTGTGCACCCCGGTG GGGGCCGGCGAGGCGATCGCCCGGGCCATCGGCCCGGCGCTGGCCCCGGGCGCCATCGTGTCCGATGTCGGCTCGGTCAA GGCGCGGGTGATCGAAATGATCGCCCCCCATCTGCCCGCGGGCGTTCATCTGGTGCCCGGCCATCCGGTGGCCGGCACCG AAAAAAGCGGCCCCGAGTCGGGGTTCGCCGAATTGTTCGAAGGCCGCTGGTGCATCCTGACGCCTTTGCCGACCACGGAC GCGCGGGCGGTCGACAAGGTTGCCGAGCTGTGGCGGCGGGTGGGCATGGTCATCGAGACGATGGATCCCGACACCCACGA CAAGGTGCTGGCCATCACCTCGCATCTGCCCCATCTGATCGCCTATACCATCGTCGGCACCGCCGCCGATCTGGAAGACC ACCTGTCGCAAAAAGTCATCGCCTTTTCCGCCGGCGGCTTCCGCGATTTCACCCGCATCGCCGGGTCCGATCCGGTGATG TGGCGCGATGTGTTCTTGAACAACCGCGAGGCGGTCTTGGAAATCCTCCAGCGCTTCACCGAGGATTTGACCGCCCTGCA GCGGGCGATCCGCTGGGGCGAGGGCGACACCCTGGAAGCCCTGTTCACCAAAACCCGCGCCATCCGCCAAGCGGTGATTG AAGCCAAACAGGCTTAG
Upstream 100 bases:
>100_bases GCTATGGCCTGCCCAACTGCCTGCGCATCACCATCGGCCGCGATGACGAGATGCAGGCGGTGGTCGAAGCCCTTGGCGCC TTCATGGCTGGCGAGGGGCG
Downstream 100 bases:
>100_bases CGTTTCGGCGGAAGCGAGCCTGAAATCCCGTGGTATTTGCCCACTTTGCCGCATAAACTCTTGTTTTGGTTGTCTCAGGG GATGGTGGTCATCGTCCTCT
Product: cyclohexadienyl dehydrogenase
Products: NA
Alternate protein names: Arogenate dehydrogenase; ADH; Cyclohexadienyl dehydrogenase; Prephenate dehydrogenase; PDH [H]
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MTTAPSSALFDRVALIGVGLIGSSLARAIRRHGLARTIAVADQGEGVAARALALGLCDEAGEDAVAAVRGADLVMLCTPV GAGEAIARAIGPALAPGAIVSDVGSVKARVIEMIAPHLPAGVHLVPGHPVAGTEKSGPESGFAELFEGRWCILTPLPTTD ARAVDKVAELWRRVGMVIETMDPDTHDKVLAITSHLPHLIAYTIVGTAADLEDHLSQKVIAFSAGGFRDFTRIAGSDPVM WRDVFLNNREAVLEILQRFTEDLTALQRAIRWGEGDTLEALFTKTRAIRQAVIEAKQA
Sequences:
>Translated_298_residues MTTAPSSALFDRVALIGVGLIGSSLARAIRRHGLARTIAVADQGEGVAARALALGLCDEAGEDAVAAVRGADLVMLCTPV GAGEAIARAIGPALAPGAIVSDVGSVKARVIEMIAPHLPAGVHLVPGHPVAGTEKSGPESGFAELFEGRWCILTPLPTTD ARAVDKVAELWRRVGMVIETMDPDTHDKVLAITSHLPHLIAYTIVGTAADLEDHLSQKVIAFSAGGFRDFTRIAGSDPVM WRDVFLNNREAVLEILQRFTEDLTALQRAIRWGEGDTLEALFTKTRAIRQAVIEAKQA >Mature_297_residues TTAPSSALFDRVALIGVGLIGSSLARAIRRHGLARTIAVADQGEGVAARALALGLCDEAGEDAVAAVRGADLVMLCTPVG AGEAIARAIGPALAPGAIVSDVGSVKARVIEMIAPHLPAGVHLVPGHPVAGTEKSGPESGFAELFEGRWCILTPLPTTDA RAVDKVAELWRRVGMVIETMDPDTHDKVLAITSHLPHLIAYTIVGTAADLEDHLSQKVIAFSAGGFRDFTRIAGSDPVMW RDVFLNNREAVLEILQRFTEDLTALQRAIRWGEGDTLEALFTKTRAIRQAVIEAKQA
Specific function: Is competent to function as either prephenate dehydrogenase or as arogenate dehydrogenase [H]
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF02153 PDH [H]
EC number: =1.3.1.43; =1.3.1.12 [H]
Molecular weight: Translated: 31500; Mature: 31368
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAPSSALFDRVALIGVGLIGSSLARAIRRHGLARTIAVADQGEGVAARALALGLCDEA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCHHHHHHHHHHHCCC GEDAVAAVRGADLVMLCTPVGAGEAIARAIGPALAPGAIVSDVGSVKARVIEMIAPHLPA CCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC GVHLVPGHPVAGTEKSGPESGFAELFEGRWCILTPLPTTDARAVDKVAELWRRVGMVIET CEEEECCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCEEEE MDPDTHDKVLAITSHLPHLIAYTIVGTAADLEDHLSQKVIAFSAGGFRDFTRIAGSDPVM CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEECCCHHHHHHHCCCCCCE WRDVFLNNREAVLEILQRFTEDLTALQRAIRWGEGDTLEALFTKTRAIRQAVIEAKQA EHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTAPSSALFDRVALIGVGLIGSSLARAIRRHGLARTIAVADQGEGVAARALALGLCDEA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCHHHHHHHHHHHCCC GEDAVAAVRGADLVMLCTPVGAGEAIARAIGPALAPGAIVSDVGSVKARVIEMIAPHLPA CCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC GVHLVPGHPVAGTEKSGPESGFAELFEGRWCILTPLPTTDARAVDKVAELWRRVGMVIET CEEEECCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCEEEE MDPDTHDKVLAITSHLPHLIAYTIVGTAADLEDHLSQKVIAFSAGGFRDFTRIAGSDPVM CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEECCCHHHHHHHCCCCCCE WRDVFLNNREAVLEILQRFTEDLTALQRAIRWGEGDTLEALFTKTRAIRQAVIEAKQA EHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7916685 [H]