| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594583
Identifier: 83594583
GI number: 83594583
Start: 3749144
End: 3750229
Strand: Reverse
Name: 83594583
Synonym: Rru_A3253
Alternate gene names: NA
Gene position: 3750229-3749144 (Counterclockwise)
Preceding gene: 83594589
Following gene: 83594582
Centisome position: 86.16
GC content: 67.59
Gene sequence:
>1086_bases ATGATCATCACGTGCCCGAGCTGCGCGGCAAAGTTCACCTTGCCCGATGGCGCCCTTGGATCGGAAGGGCGCAAGGTGAA ATGCGCCAAATGCGCTCACGTCTGGCAGGCGAAGGCCGAGGGTGCCGCGTCGTCTTTTTCCATTGACGAGGGCTACGACG ATTCCCCCTTCGCTCAGGACGAGCCGGATTTCCCCGAGCCTGCTTTCGCCCCGCCCCCGCCCCCTCCGCCCCGCCCAAGT CCCGCCCGTCCAAACCCGCCCCGTCCGGCCGCCGCGCCCTCGGCGCCGGTTTTCGATGCGGCCCCGCCGCGTCTTGGCAA GCAAGACGGGCTACCGTTGGAAATGGATCCCGAGCCGCCCTCGCGGATTCCCGCCCATGATGACGCCGCCCTCGACGAGG ATCTGGCCAAGCTCGACAGTATTCTGGGAACGCTGAAGGGCGGCGGCGTCCTCAAGGACAAGGCGCGGGGAGCGCCCGAG ATCGCCGGCGATGATTTCGCCGATGACGACCACCTCCACGACTTCCTCCAGACCCGCGTTCTTGGCGAGGACGACGATCT GGAGGACCTTGACGGCTTCATGGCCGCCGGCGAACCCGAGGCCATCCCCCGGGTCTTCACCGGACCGCGGCCCAGTGGCC GGCGGCGCGGCGCCACCGCCCTCAAGGTCGTGGTGATGACCCTGGTCGCGCTGTGGCTGCTGGCCTTGGGCGGCTGGTTC CTGCGCGATCCCCTGGTCGCCCTGGTGCCCGGTCTGGCGCCGGTCTATACGGCGCTTGGCATCGATGTGACCGATCCGCG CAGCGAGGTGATTTTCCAGAACGTGGTCAGCACCCTGGAAACCCGCGACGAAACCCGTCTTCTGGTGGTTCGCGGCCTGC TCTTCAACCCCTCCGACGAGAACCGCGAAGTGCCGCGATTGCGCCTGACGGTGATCGACGACAGCCAGAAGGTTCTTCAG CAGGTGACGGCCGCGCCGCCCCAATCGGTGCTGGCGCCCGGCGCCCAGATCCCCTTCGAAGTCTCGATGGAAAATCCCTC GCAGCTCGCCACCGGGTTCCGCGTCGTCTTCGACAAGGCCGGCTGA
Upstream 100 bases:
>100_bases CCAAGGATTAACCTTTTTGGGGCCATGTTATGGTGGCTTGCCACCGCGACCGGCCAGCCCCTATAACCAAAGATAGCACT TCGGCGGATCCGTAAAACAC
Downstream 100 bases:
>100_bases ATCCGGCCGGGCGGCGGCGCTTTGACCCAAACTTTCCCTGTTCTCGGCCATTTTTGGCGCAACGCATGATCGGGAGATCG TGATGAAAACGCGCAAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MIITCPSCAAKFTLPDGALGSEGRKVKCAKCAHVWQAKAEGAASSFSIDEGYDDSPFAQDEPDFPEPAFAPPPPPPPRPS PARPNPPRPAAAPSAPVFDAAPPRLGKQDGLPLEMDPEPPSRIPAHDDAALDEDLAKLDSILGTLKGGGVLKDKARGAPE IAGDDFADDDHLHDFLQTRVLGEDDDLEDLDGFMAAGEPEAIPRVFTGPRPSGRRRGATALKVVVMTLVALWLLALGGWF LRDPLVALVPGLAPVYTALGIDVTDPRSEVIFQNVVSTLETRDETRLLVVRGLLFNPSDENREVPRLRLTVIDDSQKVLQ QVTAAPPQSVLAPGAQIPFEVSMENPSQLATGFRVVFDKAG
Sequences:
>Translated_361_residues MIITCPSCAAKFTLPDGALGSEGRKVKCAKCAHVWQAKAEGAASSFSIDEGYDDSPFAQDEPDFPEPAFAPPPPPPPRPS PARPNPPRPAAAPSAPVFDAAPPRLGKQDGLPLEMDPEPPSRIPAHDDAALDEDLAKLDSILGTLKGGGVLKDKARGAPE IAGDDFADDDHLHDFLQTRVLGEDDDLEDLDGFMAAGEPEAIPRVFTGPRPSGRRRGATALKVVVMTLVALWLLALGGWF LRDPLVALVPGLAPVYTALGIDVTDPRSEVIFQNVVSTLETRDETRLLVVRGLLFNPSDENREVPRLRLTVIDDSQKVLQ QVTAAPPQSVLAPGAQIPFEVSMENPSQLATGFRVVFDKAG >Mature_361_residues MIITCPSCAAKFTLPDGALGSEGRKVKCAKCAHVWQAKAEGAASSFSIDEGYDDSPFAQDEPDFPEPAFAPPPPPPPRPS PARPNPPRPAAAPSAPVFDAAPPRLGKQDGLPLEMDPEPPSRIPAHDDAALDEDLAKLDSILGTLKGGGVLKDKARGAPE IAGDDFADDDHLHDFLQTRVLGEDDDLEDLDGFMAAGEPEAIPRVFTGPRPSGRRRGATALKVVVMTLVALWLLALGGWF LRDPLVALVPGLAPVYTALGIDVTDPRSEVIFQNVVSTLETRDETRLLVVRGLLFNPSDENREVPRLRLTVIDDSQKVLQ QVTAAPPQSVLAPGAQIPFEVSMENPSQLATGFRVVFDKAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38515; Mature: 38515
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIITCPSCAAKFTLPDGALGSEGRKVKCAKCAHVWQAKAEGAASSFSIDEGYDDSPFAQD CEEECCCCCCEEECCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC EPDFPEPAFAPPPPPPPRPSPARPNPPRPAAAPSAPVFDAAPPRLGKQDGLPLEMDPEPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SRIPAHDDAALDEDLAKLDSILGTLKGGGVLKDKARGAPEIAGDDFADDDHLHDFLQTRV CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHH LGEDDDLEDLDGFMAAGEPEAIPRVFTGPRPSGRRRGATALKVVVMTLVALWLLALGGWF CCCCCCHHHHHHHHHCCCCHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH LRDPLVALVPGLAPVYTALGIDVTDPRSEVIFQNVVSTLETRDETRLLVVRGLLFNPSDE HHCCHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEHCCCCCC NREVPRLRLTVIDDSQKVLQQVTAAPPQSVLAPGAQIPFEVSMENPSQLATGFRVVFDKA CCCCCEEEEEEECCHHHHHHHHHCCCCHHHHCCCCCCCEEECCCCHHHHHHHHEEEEECC G C >Mature Secondary Structure MIITCPSCAAKFTLPDGALGSEGRKVKCAKCAHVWQAKAEGAASSFSIDEGYDDSPFAQD CEEECCCCCCEEECCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC EPDFPEPAFAPPPPPPPRPSPARPNPPRPAAAPSAPVFDAAPPRLGKQDGLPLEMDPEPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SRIPAHDDAALDEDLAKLDSILGTLKGGGVLKDKARGAPEIAGDDFADDDHLHDFLQTRV CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHH LGEDDDLEDLDGFMAAGEPEAIPRVFTGPRPSGRRRGATALKVVVMTLVALWLLALGGWF CCCCCCHHHHHHHHHCCCCHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH LRDPLVALVPGLAPVYTALGIDVTDPRSEVIFQNVVSTLETRDETRLLVVRGLLFNPSDE HHCCHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEHCCCCCC NREVPRLRLTVIDDSQKVLQQVTAAPPQSVLAPGAQIPFEVSMENPSQLATGFRVVFDKA CCCCCEEEEEEECCHHHHHHHHHCCCCHHHHCCCCCCCEEECCCCHHHHHHHHEEEEECC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA