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The map label for this gene is yfbG [C]

Identifier: 83594582

GI number: 83594582

Start: 3748117

End: 3749061

Strand: Reverse

Name: yfbG [C]

Synonym: Rru_A3252

Alternate gene names: 83594582

Gene position: 3749061-3748117 (Counterclockwise)

Preceding gene: 83594583

Following gene: 83594580

Centisome position: 86.13

GC content: 61.9

Gene sequence:

>945_bases
ATGAAAACGCGCAAGCGGGTATTGGTGACCGGGGGGGCGGGGTTTTTGGGCTCCCACCTGTGTGAAAGGCTGATCGGCCA
GGGCTGCGACGTTCTGTGTGTCGATAATTTCTTTACTGGCCAGCGCGAGAACGTCGCCCATCTGATCGGCAATCCCTATT
TCGAACTGATGCGCCACGACGTGACCTTCCCGCTCTATGTGGAGGTCGACGAGATCTATAACCTCGCCTGTCCGGCCAGC
CCGATCCACTACCAGTTCGATCCGGTGCAAACCACCAAGACCAGCGTCCATGGCGCCATCAATCTGCTGGGGCTGGCCAA
GCGGACCAAGGCGCGGATCCTGCAAGCCTCGACCAGCGAGGTTTATGGCGATCCCACCATCCATCCCCAGACCGAGGATT
ATCGCGGCAACGTCAATCCCATCGGGCCGCGCGCCTGCTACGACGAGGGCAAGCGCTGCGCCGAAACCCTATTTTTCGAT
TATCACCGGCAGTTCGCCCTTGATATCAAGGTCATCCGCATCTTCAACACCTATGGGCCGCGCATGCATCCCGACGATGG
CCGGGTGGTGTCGAACTTCATCTTGCAGGCCCTGCGCGGTCAGCCGATCTCGCTCTATGGCGACGGCTTGCAGACCCGCT
CGTTCTGCTATGTCGATGATCTGATCGACGGCATGCTGGCTTTCATGGCGACGCCGCCCAGCGAACCCGGCCCGCTTAAT
CTGGGCAATCCCCACGAGATCACCATCCGCGCCCTGGCCGAAAAAATCATCGCCATGACCGGCTCGGCCTCGGATCTGGT
GTTCCATCCGCTGCCCGCCGACGATCCGCGCCAGCGCCGCCCCGATATCACCAAGGCCCGGGCCCTGCTCGACTGGGCGC
CGACCATCGACGTCGAAGACGGCCTGGGCCGGACCATCGAGTATTTTCGCGCCCGCATGGGCTGA

Upstream 100 bases:

>100_bases
TTCGACAAGGCCGGCTGAATCCGGCCGGGCGGCGGCGCTTTGACCCAAACTTTCCCTGTTCTCGGCCATTTTTGGCGCAA
CGCATGATCGGGAGATCGTG

Downstream 100 bases:

>100_bases
CATCGGGCGCCAACCAAAACGGCCACGCTCCCTTTGCGGAGCGTGGCCCAACCTTGGCAATGACTAAAACCTAAAAAGAA
CGAGGCTCAGAGACGCAGGG

Product: dTDP-glucose 4,6-dehydratase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MKTRKRVLVTGGAGFLGSHLCERLIGQGCDVLCVDNFFTGQRENVAHLIGNPYFELMRHDVTFPLYVEVDEIYNLACPAS
PIHYQFDPVQTTKTSVHGAINLLGLAKRTKARILQASTSEVYGDPTIHPQTEDYRGNVNPIGPRACYDEGKRCAETLFFD
YHRQFALDIKVIRIFNTYGPRMHPDDGRVVSNFILQALRGQPISLYGDGLQTRSFCYVDDLIDGMLAFMATPPSEPGPLN
LGNPHEITIRALAEKIIAMTGSASDLVFHPLPADDPRQRRPDITKARALLDWAPTIDVEDGLGRTIEYFRARMG

Sequences:

>Translated_314_residues
MKTRKRVLVTGGAGFLGSHLCERLIGQGCDVLCVDNFFTGQRENVAHLIGNPYFELMRHDVTFPLYVEVDEIYNLACPAS
PIHYQFDPVQTTKTSVHGAINLLGLAKRTKARILQASTSEVYGDPTIHPQTEDYRGNVNPIGPRACYDEGKRCAETLFFD
YHRQFALDIKVIRIFNTYGPRMHPDDGRVVSNFILQALRGQPISLYGDGLQTRSFCYVDDLIDGMLAFMATPPSEPGPLN
LGNPHEITIRALAEKIIAMTGSASDLVFHPLPADDPRQRRPDITKARALLDWAPTIDVEDGLGRTIEYFRARMG
>Mature_314_residues
MKTRKRVLVTGGAGFLGSHLCERLIGQGCDVLCVDNFFTGQRENVAHLIGNPYFELMRHDVTFPLYVEVDEIYNLACPAS
PIHYQFDPVQTTKTSVHGAINLLGLAKRTKARILQASTSEVYGDPTIHPQTEDYRGNVNPIGPRACYDEGKRCAETLFFD
YHRQFALDIKVIRIFNTYGPRMHPDDGRVVSNFILQALRGQPISLYGDGLQTRSFCYVDDLIDGMLAFMATPPSEPGPLN
LGNPHEITIRALAEKIIAMTGSASDLVFHPLPADDPRQRRPDITKARALLDWAPTIDVEDGLGRTIEYFRARMG

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI42516563, Length=312, Percent_Identity=57.0512820512821, Blast_Score=391, Evalue=1e-109,
Organism=Homo sapiens, GI7657641, Length=326, Percent_Identity=26.0736196319018, Blast_Score=104, Evalue=1e-22,
Organism=Escherichia coli, GI1788589, Length=343, Percent_Identity=26.2390670553936, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI48994969, Length=342, Percent_Identity=25.1461988304094, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1788353, Length=338, Percent_Identity=26.3313609467456, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1786974, Length=338, Percent_Identity=24.8520710059172, Blast_Score=77, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17539532, Length=313, Percent_Identity=56.5495207667732, Blast_Score=377, Evalue=1e-105,
Organism=Caenorhabditis elegans, GI115532424, Length=336, Percent_Identity=27.3809523809524, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17568069, Length=338, Percent_Identity=27.2189349112426, Blast_Score=77, Evalue=8e-15,
Organism=Drosophila melanogaster, GI21356223, Length=313, Percent_Identity=59.1054313099042, Blast_Score=394, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 35081; Mature: 35081

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRKRVLVTGGAGFLGSHLCERLIGQGCDVLCVDNFFTGQRENVAHLIGNPYFELMRHD
CCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHCCHHHHHHHHC
VTFPLYVEVDEIYNLACPASPIHYQFDPVQTTKTSVHGAINLLGLAKRTKARILQASTSE
CCCEEEEEHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VYGDPTIHPQTEDYRGNVNPIGPRACYDEGKRCAETLFFDYHRQFALDIKVIRIFNTYGP
HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCC
RMHPDDGRVVSNFILQALRGQPISLYGDGLQTRSFCYVDDLIDGMLAFMATPPSEPGPLN
CCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCC
LGNPHEITIRALAEKIIAMTGSASDLVFHPLPADDPRQRRPDITKARALLDWAPTIDVED
CCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHCCCCHHHHHHHHHCCCCCCCCC
GLGRTIEYFRARMG
CCCHHHHHHHHHCC
>Mature Secondary Structure
MKTRKRVLVTGGAGFLGSHLCERLIGQGCDVLCVDNFFTGQRENVAHLIGNPYFELMRHD
CCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHCCHHHHHHHHC
VTFPLYVEVDEIYNLACPASPIHYQFDPVQTTKTSVHGAINLLGLAKRTKARILQASTSE
CCCEEEEEHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VYGDPTIHPQTEDYRGNVNPIGPRACYDEGKRCAETLFFDYHRQFALDIKVIRIFNTYGP
HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCC
RMHPDDGRVVSNFILQALRGQPISLYGDGLQTRSFCYVDDLIDGMLAFMATPPSEPGPLN
CCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCC
LGNPHEITIRALAEKIIAMTGSASDLVFHPLPADDPRQRRPDITKARALLDWAPTIDVED
CCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHCCCCHHHHHHHHHCCCCCCCCC
GLGRTIEYFRARMG
CCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]