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The map label for this gene is atpF

Identifier: 83594573

GI number: 83594573

Start: 3738796

End: 3739344

Strand: Reverse

Name: atpF

Synonym: Rru_A3243

Alternate gene names: 83594573

Gene position: 3739344-3738796 (Counterclockwise)

Preceding gene: 83594574

Following gene: 83594572

Centisome position: 85.91

GC content: 69.03

Gene sequence:

>549_bases
ATGATCTCCCTCGCTCTCGCCGCCGAGACCGCCGAGCACGGTGGGGAAGCCGCCAGCCACGGCGGCCTGTTCGCCGATCC
GGCCTTCTGGGTCTCCATCGCCTTCCTGATGGTCGTCGGCTTTGTTTATATCAAGGCCAAGAACAAGATCCTTGGGGCCC
TGGACGGTCGGGGTGCCGCGGTCAAGGCCAAGCTCGACGAGGCCCGCAAGCTGCGCGACGACGCCCAGGCGCTGCTGGCC
GAGTACCAGCGCCGCCAGCGCGACGCGATGAAGGAAGCCGACGAGATCATTCGCCACGCCAAGGATGAGGCCGCCCGTCT
GCGCGCCAAGGCCGAAGCCGATCTCGAGGCCTCGATCCGCCGCCGCGAACAGCAGGCCGTCGATCGCATCGCCCAGGCCG
AGGCCCAGGCCCTGGCCCAGGTGCGCAACGAAGCCGTCGATGTCGCCGTCTCCGCCGCGCGCTCCTTGATGGCCGGGTCG
CTGGCCAAGGCCGATCAGAACCGCCTGATCGACGCGGCGATCGCCGACCTGCCGGGCAAGCTGCACTAA

Upstream 100 bases:

>100_bases
GCGCGGTCGCCAGCGATATAGTCGGCAAGCTCGCCGGGCTGCGCGTCGACGATGCCGCGCTCACCGCCGCCGTCGCCGCC
GCGATCAAGGAGTAAGGCCG

Downstream 100 bases:

>100_bases
GGCCAATCCCGGGGGCTGGTGATCCGGGTCCGACGACGAGTGGCTTCCCGATCAAGATGCTAAAGCGGCGTGTGGAGACC
TTGGTCACCGCGCGCCGCTT

Product: H+-transporting two-sector ATPase, subunit B/B'

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MISLALAAETAEHGGEAASHGGLFADPAFWVSIAFLMVVGFVYIKAKNKILGALDGRGAAVKAKLDEARKLRDDAQALLA
EYQRRQRDAMKEADEIIRHAKDEAARLRAKAEADLEASIRRREQQAVDRIAQAEAQALAQVRNEAVDVAVSAARSLMAGS
LAKADQNRLIDAAIADLPGKLH

Sequences:

>Translated_182_residues
MISLALAAETAEHGGEAASHGGLFADPAFWVSIAFLMVVGFVYIKAKNKILGALDGRGAAVKAKLDEARKLRDDAQALLA
EYQRRQRDAMKEADEIIRHAKDEAARLRAKAEADLEASIRRREQQAVDRIAQAEAQALAQVRNEAVDVAVSAARSLMAGS
LAKADQNRLIDAAIADLPGKLH
>Mature_182_residues
MISLALAAETAEHGGEAASHGGLFADPAFWVSIAFLMVVGFVYIKAKNKILGALDGRGAAVKAKLDEARKLRDDAQALLA
EYQRRQRDAMKEADEIIRHAKDEAARLRAKAEADLEASIRRREQQAVDRIAQAEAQALAQVRNEAVDVAVSAARSLMAGS
LAKADQNRLIDAAIADLPGKLH

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_RHORT (Q2RPA7)

Other databases:

- EMBL:   CP000230
- RefSeq:   YP_428325.1
- STRING:   Q2RPA7
- GeneID:   3836690
- GenomeReviews:   CP000230_GR
- KEGG:   rru:Rru_A3243
- NMPDR:   fig|1085.1.peg.885
- eggNOG:   COG0711
- HOGENOM:   HBG692690
- OMA:   KTEEFVA
- ProtClustDB:   CLSK745234
- BioCyc:   RRUB269796:RRU_A3243-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 19579; Mature: 19579

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x40753ec4)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLALAAETAEHGGEAASHGGLFADPAFWVSIAFLMVVGFVYIKAKNKILGALDGRGAA
CCCHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCC
VKAKLDEARKLRDDAQALLAEYQRRQRDAMKEADEIIRHAKDEAARLRAKAEADLEASIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RREQQAVDRIAQAEAQALAQVRNEAVDVAVSAARSLMAGSLAKADQNRLIDAAIADLPGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LH
CH
>Mature Secondary Structure
MISLALAAETAEHGGEAASHGGLFADPAFWVSIAFLMVVGFVYIKAKNKILGALDGRGAA
CCCHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCC
VKAKLDEARKLRDDAQALLAEYQRRQRDAMKEADEIIRHAKDEAARLRAKAEADLEASIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RREQQAVDRIAQAEAQALAQVRNEAVDVAVSAARSLMAGSLAKADQNRLIDAAIADLPGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LH
CH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA