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The map label for this gene is 83594572

Identifier: 83594572

GI number: 83594572

Start: 3737937

End: 3738386

Strand: Reverse

Name: 83594572

Synonym: Rru_A3242

Alternate gene names: NA

Gene position: 3738386-3737937 (Counterclockwise)

Preceding gene: 83594573

Following gene: 83594570

Centisome position: 85.88

GC content: 62.22

Gene sequence:

>450_bases
ATGAATGGTCGAGAAACGATGCCCGAGAGCGATACCCGCACCATCCATCATGTGGACGCCCATGTCGGTCAAAGGGTCCG
TCAGCGTCGGACCGCCCTGATCCTTGACCAGGAAACCCTGGCGCGCCGAATCGGCGTCTCTTTCCAGCAAATCCAGAAAT
ACGAACGCGGCCGCAACCGGATCAGCGCCAGCCGGCTCTATGACATCGCCAAGGCGCTGGCGGTTCCCATCGATTATTTT
TTCAGTGATCTGGAGCGCGGCGATCCCCGGCATGACGGGGCTTTGGCCGAGGACATGGGGCGCTTGGCCCAAGGCGGGAG
CGCCCCGCCCGATCCGTTGCGCCTGACCCAAAGCCTGGACCTGGCCCAGGCCTTTTGGGCGCTGCCCGATGACGGGATGC
GCCAAAGCTTCATCGCCCTTCTCAAGGCGATGAGCTCCTTTGAGGATTAG

Upstream 100 bases:

>100_bases
TTTTTCAAGATTGTGAGAGGTAAGGTTGTAGCCCGCTTGGGGGAACAATCTGCGGCTCCGGCCGGTTGGATCACGCAAGC
CTCCGGCTATTCCTCCAGTC

Downstream 100 bases:

>100_bases
AACAAATCCCGAGCGCTCCGACCCGGAGCGCGACGCTGAGTCGCTAACCGCGCTGGCGGATTCGCCCCAGGAAATCATCG
ACCTGGGTGGTTAGGCGCGC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: URF4 [H]

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MNGRETMPESDTRTIHHVDAHVGQRVRQRRTALILDQETLARRIGVSFQQIQKYERGRNRISASRLYDIAKALAVPIDYF
FSDLERGDPRHDGALAEDMGRLAQGGSAPPDPLRLTQSLDLAQAFWALPDDGMRQSFIALLKAMSSFED

Sequences:

>Translated_149_residues
MNGRETMPESDTRTIHHVDAHVGQRVRQRRTALILDQETLARRIGVSFQQIQKYERGRNRISASRLYDIAKALAVPIDYF
FSDLERGDPRHDGALAEDMGRLAQGGSAPPDPLRLTQSLDLAQAFWALPDDGMRQSFIALLKAMSSFED
>Mature_149_residues
MNGRETMPESDTRTIHHVDAHVGQRVRQRRTALILDQETLARRIGVSFQQIQKYERGRNRISASRLYDIAKALAVPIDYF
FSDLERGDPRHDGALAEDMGRLAQGGSAPPDPLRLTQSLDLAQAFWALPDDGMRQSFIALLKAMSSFED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 16809; Mature: 16809

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGRETMPESDTRTIHHVDAHVGQRVRQRRTALILDQETLARRIGVSFQQIQKYERGRNR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ISASRLYDIAKALAVPIDYFFSDLERGDPRHDGALAEDMGRLAQGGSAPPDPLRLTQSLD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH
LAQAFWALPDDGMRQSFIALLKAMSSFED
HHHHHHCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNGRETMPESDTRTIHHVDAHVGQRVRQRRTALILDQETLARRIGVSFQQIQKYERGRNR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ISASRLYDIAKALAVPIDYFFSDLERGDPRHDGALAEDMGRLAQGGSAPPDPLRLTQSLD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH
LAQAFWALPDDGMRQSFIALLKAMSSFED
HHHHHHCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2902844 [H]