| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594555
Identifier: 83594555
GI number: 83594555
Start: 3719367
End: 3719753
Strand: Reverse
Name: 83594555
Synonym: Rru_A3225
Alternate gene names: NA
Gene position: 3719753-3719367 (Counterclockwise)
Preceding gene: 83594556
Following gene: 83594554
Centisome position: 85.46
GC content: 63.82
Gene sequence:
>387_bases ATGACTGGTCCGCGTCCCCTGGCGGAACCCGACGCCCATGCCGCCGGGCTGGTCCTCTCCAAGGCCACCGTGCGCGCATC GGATCATTTCGGTCTGACCAATGCCGGTCTGGCCCAGATCATCGGCCTGTCGGAAGCTTCGGTGTCGCGGATGCGCGCGG GCCAGTATGTGCTGCGTCGCGGCCGCAAGGAATTCGAGTTGGCGCAGTTTTTTGTCCGCATTTTCCGCAGCCTCGACGCC ATCACCGGCGGCGATGATGGTTCCAGCCGGTCCTGGTTGAACGCCGAGAACCACGCTTTGCGGGCCCGCCCCGTTGATCT GATGAAAACCGTAAGAGGATTGGTGGCGACGGCGGATTATGTGGACTCCCGACGCGCTGTCCTCTGA
Upstream 100 bases:
>100_bases CGTTTGCGTTCGAGGGGCGATTGCCGCGTCTTGACGTCAGTCCCCGCCAAAGCCACTCTCTATAGAAAGAATGGGTGACA TAACATTCGGGAGAAAGCCG
Downstream 100 bases:
>100_bases AGTCCGGCCCTATCGTCAGGATGTCTGGCGGGTGGTCGAGGCGCAGTCGCGGGCTTCGACCATGCGACTGGTCGACAGCC TTGAAGAGCAGCGCCTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MTGPRPLAEPDAHAAGLVLSKATVRASDHFGLTNAGLAQIIGLSEASVSRMRAGQYVLRRGRKEFELAQFFVRIFRSLDA ITGGDDGSSRSWLNAENHALRARPVDLMKTVRGLVATADYVDSRRAVL
Sequences:
>Translated_128_residues MTGPRPLAEPDAHAAGLVLSKATVRASDHFGLTNAGLAQIIGLSEASVSRMRAGQYVLRRGRKEFELAQFFVRIFRSLDA ITGGDDGSSRSWLNAENHALRARPVDLMKTVRGLVATADYVDSRRAVL >Mature_127_residues TGPRPLAEPDAHAAGLVLSKATVRASDHFGLTNAGLAQIIGLSEASVSRMRAGQYVLRRGRKEFELAQFFVRIFRSLDAI TGGDDGSSRSWLNAENHALRARPVDLMKTVRGLVATADYVDSRRAVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13893; Mature: 13762
Theoretical pI: Translated: 10.98; Mature: 10.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPRPLAEPDAHAAGLVLSKATVRASDHFGLTNAGLAQIIGLSEASVSRMRAGQYVLRR CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC GRKEFELAQFFVRIFRSLDAITGGDDGSSRSWLNAENHALRARPVDLMKTVRGLVATADY CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH VDSRRAVL HHCCCCCC >Mature Secondary Structure TGPRPLAEPDAHAAGLVLSKATVRASDHFGLTNAGLAQIIGLSEASVSRMRAGQYVLRR CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC GRKEFELAQFFVRIFRSLDAITGGDDGSSRSWLNAENHALRARPVDLMKTVRGLVATADY CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH VDSRRAVL HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA