| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is ccrMIM [H]
Identifier: 83594540
GI number: 83594540
Start: 3700630
End: 3701733
Strand: Direct
Name: ccrMIM [H]
Synonym: Rru_A3210
Alternate gene names: 83594540
Gene position: 3700630-3701733 (Clockwise)
Preceding gene: 83594539
Following gene: 83594543
Centisome position: 85.02
GC content: 64.13
Gene sequence:
>1104_bases ATGACCGACCCGCTGCGCACCAATCGCATCTATCAGGGCGACAGCATCGAGGTGATGCGGTCGCTGCCCAGCGCCTCGAT CGACATGATCTTCGCCGACCCGCCCTATAACATGATGCTGGGCGGCGAACTGCTGCGCCCCGACAACAGCCGGGTCGATG GCGTCGATGACGAATGGGACCGCTTCGAAAGCCAGCGCGCCTATGCCGAGTTCACTCGGAGCTGGCTGCGCGAGGCGCGG CGCCTGCTGAAAGACAACGGCACCATCTGGGTGATCGGCAGCTACCACAATATCTATCGGGTCGGCGCCGAGCTGCAGGA TCTGGGGTTCTGGACGCTGAACGACGTGGTCTGGCGCAAAGCCAACCCGATGCCGAACTTCAAGGGCACCCGCTTCACCA ATGCCCATGAAACCCTGCTGTGGTGCGCCAAATCGGCCGAGGCCCGCTACACCTTCAATTACGAGGCGATGAAAAGCCTG AACGAAGGCTTGCAGATGCGCAGCGATTGGACGCTGCCGCTGTGCAACGGCAAGGAGCGCCTGAAGGCCGAGGACGGCAA GAAGGTCCATCCCACCCAAAAGCCCGAAAGCCTGCTTTATCGGGTGATCTTGTCGTCGACCCATCCGGGCGACATCATCC TCGATCCGTTTTTCGGCACCGGCACCACCGGGGCCGTCGCCAAATTGCTTGGTCGCCAGTGGATCGGCCTGGAACGCGAC GAAGCCTATATCGCCGCCGCCCGCCAGCGCATCGCCCAGGTCGAACCGATCAAGGATCTGCGGCTGCTGATCACGCCGTC GAAGAAATCCGAACCGCGCATTCCCTTTGGCACCGTGGTCGAACGCGGCCTGCTCGCCCCGGGCAGCCTGCTTTGCGATT CCCAGCGGCGGTGGACAGCCAAGGTCCGCGCCGATGGCACGCTGGTCGCCACCTCGTCCCATGGCGATCATCGCGGCTCG ATCCATCAGGTCGGTGCCGCCGTCCAAGGCGCTCCGGCCTGCAATGGCTGGACGTTCTGGCATATCGACCGCCCCGGCGG CGCCGTTCCCATCGACGTGCTGCGCCAGCAGGTACGGGCCGAACTGGAAGCCTGCGCCCTTTAG
Upstream 100 bases:
>100_bases CTCCGGCCCTTTGGTTTGTCGTTTTCTCGTGATCGGCTCGCAAGCAATTGACTGACATCGAAGCTTCCCTTGCCGTCCGC CATCCCCTGGAGGGGCAGTC
Downstream 100 bases:
>100_bases CGCGGGGGCGTGAAACCCGCTTCACGCTCCCCGTTCTAAGTCTTTGGCTGCGCCAAAGGTGGGCGCGGCGGGGCTGCCCT TTCGCGGCCTTCCAGGACAT
Product: DNA methylase N-4/N-6
Products: NA
Alternate protein names: M.CcrMI; Adenine-specific methyltransferase CcrMI [H]
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MTDPLRTNRIYQGDSIEVMRSLPSASIDMIFADPPYNMMLGGELLRPDNSRVDGVDDEWDRFESQRAYAEFTRSWLREAR RLLKDNGTIWVIGSYHNIYRVGAELQDLGFWTLNDVVWRKANPMPNFKGTRFTNAHETLLWCAKSAEARYTFNYEAMKSL NEGLQMRSDWTLPLCNGKERLKAEDGKKVHPTQKPESLLYRVILSSTHPGDIILDPFFGTGTTGAVAKLLGRQWIGLERD EAYIAAARQRIAQVEPIKDLRLLITPSKKSEPRIPFGTVVERGLLAPGSLLCDSQRRWTAKVRADGTLVATSSHGDHRGS IHQVGAAVQGAPACNGWTFWHIDRPGGAVPIDVLRQQVRAELEACAL
Sequences:
>Translated_367_residues MTDPLRTNRIYQGDSIEVMRSLPSASIDMIFADPPYNMMLGGELLRPDNSRVDGVDDEWDRFESQRAYAEFTRSWLREAR RLLKDNGTIWVIGSYHNIYRVGAELQDLGFWTLNDVVWRKANPMPNFKGTRFTNAHETLLWCAKSAEARYTFNYEAMKSL NEGLQMRSDWTLPLCNGKERLKAEDGKKVHPTQKPESLLYRVILSSTHPGDIILDPFFGTGTTGAVAKLLGRQWIGLERD EAYIAAARQRIAQVEPIKDLRLLITPSKKSEPRIPFGTVVERGLLAPGSLLCDSQRRWTAKVRADGTLVATSSHGDHRGS IHQVGAAVQGAPACNGWTFWHIDRPGGAVPIDVLRQQVRAELEACAL >Mature_366_residues TDPLRTNRIYQGDSIEVMRSLPSASIDMIFADPPYNMMLGGELLRPDNSRVDGVDDEWDRFESQRAYAEFTRSWLREARR LLKDNGTIWVIGSYHNIYRVGAELQDLGFWTLNDVVWRKANPMPNFKGTRFTNAHETLLWCAKSAEARYTFNYEAMKSLN EGLQMRSDWTLPLCNGKERLKAEDGKKVHPTQKPESLLYRVILSSTHPGDIILDPFFGTGTTGAVAKLLGRQWIGLERDE AYIAAARQRIAQVEPIKDLRLLITPSKKSEPRIPFGTVVERGLLAPGSLLCDSQRRWTAKVRADGTLVATSSHGDHRGSI HQVGAAVQGAPACNGWTFWHIDRPGGAVPIDVLRQQVRAELEACAL
Specific function: This methylase recognizes the double-stranded sequence GANTC and causes specific methylation on A-2 on both strands. Ccrm-mediated methylation has important cellular functions. Appears to contribute to the accurate cell-cycle control of DNA replication an
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI87082238, Length=257, Percent_Identity=31.1284046692607, Blast_Score=117, Evalue=8e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002941 - InterPro: IPR002052 - InterPro: IPR001091 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 41274; Mature: 41143
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPLRTNRIYQGDSIEVMRSLPSASIDMIFADPPYNMMLGGELLRPDNSRVDGVDDEWD CCCCCCCCEEECCCHHHHHHHCCCCCEEEEECCCCCCEEECCEEECCCCCCCCCCCHHHH RFESQRAYAEFTRSWLREARRLLKDNGTIWVIGSYHNIYRVGAELQDLGFWTLNDVVWRK HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCHHHHCCCEEHHHHHHHC ANPMPNFKGTRFTNAHETLLWCAKSAEARYTFNYEAMKSLNEGLQMRSDWTLPLCNGKER CCCCCCCCCCEECCHHHHHHEEECCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCHHH LKAEDGKKVHPTQKPESLLYRVILSSTHPGDIILDPFFGTGTTGAVAKLLGRQWIGLERD HCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCC EAYIAAARQRIAQVEPIKDLRLLITPSKKSEPRIPFGTVVERGLLAPGSLLCDSQRRWTA HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCHHEECCCCCEEE KVRADGTLVATSSHGDHRGSIHQVGAAVQGAPACNGWTFWHIDRPGGAVPIDVLRQQVRA EEECCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHH ELEACAL HHHHHCC >Mature Secondary Structure TDPLRTNRIYQGDSIEVMRSLPSASIDMIFADPPYNMMLGGELLRPDNSRVDGVDDEWD CCCCCCCEEECCCHHHHHHHCCCCCEEEEECCCCCCEEECCEEECCCCCCCCCCCHHHH RFESQRAYAEFTRSWLREARRLLKDNGTIWVIGSYHNIYRVGAELQDLGFWTLNDVVWRK HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCHHHHCCCEEHHHHHHHC ANPMPNFKGTRFTNAHETLLWCAKSAEARYTFNYEAMKSLNEGLQMRSDWTLPLCNGKER CCCCCCCCCCEECCHHHHHHEEECCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCHHH LKAEDGKKVHPTQKPESLLYRVILSSTHPGDIILDPFFGTGTTGAVAKLLGRQWIGLERD HCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCC EAYIAAARQRIAQVEPIKDLRLLITPSKKSEPRIPFGTVVERGLLAPGSLLCDSQRRWTA HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCHHEECCCCCEEE KVRADGTLVATSSHGDHRGSIHQVGAAVQGAPACNGWTFWHIDRPGGAVPIDVLRQQVRA EEECCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHH ELEACAL HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8289276 [H]