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The map label for this gene is smf [H]

Identifier: 83594524

GI number: 83594524

Start: 3682974

End: 3684098

Strand: Direct

Name: smf [H]

Synonym: Rru_A3194

Alternate gene names: 83594524

Gene position: 3682974-3684098 (Clockwise)

Preceding gene: 83594523

Following gene: 83594525

Centisome position: 84.61

GC content: 70.76

Gene sequence:

>1125_bases
ATGGCCCCCGCCGCCCGGCCGCTCACCGCCTCGGAAAAGCTTGACCGCCTGCGCCTGCTGCGCACGGAAAACGTTGGCCC
GATCACTTGGCGACGGCTGATGGCCCGCTATGGCAGCGCCGCCAGCGCCCTTGACGCCCTGCCCGATCTGGCGCGGCGCG
GCGGCGGGGCCAAACCCTTGCGCATCTGCCCGCTGGCGGCGGCCAAGCGGGAAATGGACACCCTGGCCGGCCTTGATGCC
ACGATGGTTTTTCTGGACGAGGCGGATTATCCCCCGGCCCTGGCGGCGATCGAAGACGCCCCGCCGATGTTTTGCCTGCG
CGGCGCCCTGGGGCTGCTTGGCAAGCCGATGGTCGCCATCGTCGGCGCCCGCAACGCATCGGCCAATGGTCAGCGTCTGG
CCGAACGTCTGGCCGCCGACCTTGGCCGTTCGGGTCTGGTGGTGGTGTCGGGCATGGCGCGCGGCGTCGATTCGGCGGCC
CATGTCGGAGCCTTGGAAAGCGGCACCCTCGCCGTGGTCGCCGGCGGCGTCGATGTGGTCTATCCGCCCGAGAACGACGG
GCTGTATCGCCGGCTGATCACCGAGGGCGCGGTGATTTCCGAAACGGCGCCGGGCGAACAACCCCAGGCCCGCCACTTCC
CCCGGCGCAACCGCATCGTTTCGGGGCTGTCGCTGGGCGTGATCGTCGTTGAAGGGGCGCCGCGCTCGGGCTCGCTGATC
ACGGCGCGACTCGCCGCCGATCAGGGCCGCGAGGTGATGGCCGTTCCCGGTTCGCCCCTTGATTCGCGCGCCCAGGGGCC
CAACGGCCTGATCAAGAACGGCGCCGCCCTGATCGAAGACGCCGCCGATGTGCTGCGCATCCTCAGCCCGCTGATCGCCC
GGCCGATGGCCGAGGATAAGCCGCAAAACTACGCCTCGGCCCCGCCCAGCCCCATCGCCGACTCCACCATCGACGCCGCC
CGGCCCCGGGTGATCGAAGCCCTGGGCATGTCGCCGGTCGGCGTCGACGAGGTCATCCGGCTCTGCACCCTGCCGCCGGC
GGTGGTGGCGGTGGTTCTTCTCGAGCTTGAACTGGCCGGACGCCTGGACCGACTGGTCGGCAACCGCGTCTGCCTGATCG
CCTGA

Upstream 100 bases:

>100_bases
CCATCCTCGCCCTGCCGGCGATGGCCGAATGGGACGCCCTGGCCAAGGCCGAGCCCTGGGTGATCGAACGCTATGAACCC
GCCGCCCCGACCGCCTGACC

Downstream 100 bases:

>100_bases
GCAAAGCGGCCGGACGATCGGCGGGGACCGGGGAAGCGCCAAAGGCCCGCGCCATACCTATATGCTATAGCTGTGTGGCA
AGGAAGGAGCCCGACCATGC

Product: SMF protein

Products: NA

Alternate protein names: DNA-processing chain A [H]

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MAPAARPLTASEKLDRLRLLRTENVGPITWRRLMARYGSAASALDALPDLARRGGGAKPLRICPLAAAKREMDTLAGLDA
TMVFLDEADYPPALAAIEDAPPMFCLRGALGLLGKPMVAIVGARNASANGQRLAERLAADLGRSGLVVVSGMARGVDSAA
HVGALESGTLAVVAGGVDVVYPPENDGLYRRLITEGAVISETAPGEQPQARHFPRRNRIVSGLSLGVIVVEGAPRSGSLI
TARLAADQGREVMAVPGSPLDSRAQGPNGLIKNGAALIEDAADVLRILSPLIARPMAEDKPQNYASAPPSPIADSTIDAA
RPRVIEALGMSPVGVDEVIRLCTLPPAVVAVVLLELELAGRLDRLVGNRVCLIA

Sequences:

>Translated_374_residues
MAPAARPLTASEKLDRLRLLRTENVGPITWRRLMARYGSAASALDALPDLARRGGGAKPLRICPLAAAKREMDTLAGLDA
TMVFLDEADYPPALAAIEDAPPMFCLRGALGLLGKPMVAIVGARNASANGQRLAERLAADLGRSGLVVVSGMARGVDSAA
HVGALESGTLAVVAGGVDVVYPPENDGLYRRLITEGAVISETAPGEQPQARHFPRRNRIVSGLSLGVIVVEGAPRSGSLI
TARLAADQGREVMAVPGSPLDSRAQGPNGLIKNGAALIEDAADVLRILSPLIARPMAEDKPQNYASAPPSPIADSTIDAA
RPRVIEALGMSPVGVDEVIRLCTLPPAVVAVVLLELELAGRLDRLVGNRVCLIA
>Mature_373_residues
APAARPLTASEKLDRLRLLRTENVGPITWRRLMARYGSAASALDALPDLARRGGGAKPLRICPLAAAKREMDTLAGLDAT
MVFLDEADYPPALAAIEDAPPMFCLRGALGLLGKPMVAIVGARNASANGQRLAERLAADLGRSGLVVVSGMARGVDSAAH
VGALESGTLAVVAGGVDVVYPPENDGLYRRLITEGAVISETAPGEQPQARHFPRRNRIVSGLSLGVIVVEGAPRSGSLIT
ARLAADQGREVMAVPGSPLDSRAQGPNGLIKNGAALIEDAADVLRILSPLIARPMAEDKPQNYASAPPSPIADSTIDAAR
PRVIEALGMSPVGVDEVIRLCTLPPAVVAVVLLELELAGRLDRLVGNRVCLIA

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=290, Percent_Identity=37.2413793103448, Blast_Score=158, Evalue=7e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 38919; Mature: 38787

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPAARPLTASEKLDRLRLLRTENVGPITWRRLMARYGSAASALDALPDLARRGGGAKPL
CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCE
RICPLAAAKREMDTLAGLDATMVFLDEADYPPALAAIEDAPPMFCLRGALGLLGKPMVAI
EECCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCEEE
VGARNASANGQRLAERLAADLGRSGLVVVSGMARGVDSAAHVGALESGTLAVVAGGVDVV
EECCCCCCCHHHHHHHHHHHCCCCCEEEEECHHHCCCHHHHHCCCCCCCEEEEECCEEEE
YPPENDGLYRRLITEGAVISETAPGEQPQARHFPRRNRIVSGLSLGVIVVEGAPRSGSLI
ECCCCCCHHHHHHHCCCEEECCCCCCCCHHHCCCHHHHHHCCCEEEEEEEECCCCCCCEE
TARLAADQGREVMAVPGSPLDSRAQGPNGLIKNGAALIEDAADVLRILSPLIARPMAEDK
EEEEECCCCCEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PQNYASAPPSPIADSTIDAARPRVIEALGMSPVGVDEVIRLCTLPPAVVAVVLLELELAG
CCCCCCCCCCCCCCCCHHHHCHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
RLDRLVGNRVCLIA
HHHHHHCCCEEEEC
>Mature Secondary Structure 
APAARPLTASEKLDRLRLLRTENVGPITWRRLMARYGSAASALDALPDLARRGGGAKPL
CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCE
RICPLAAAKREMDTLAGLDATMVFLDEADYPPALAAIEDAPPMFCLRGALGLLGKPMVAI
EECCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCEEE
VGARNASANGQRLAERLAADLGRSGLVVVSGMARGVDSAAHVGALESGTLAVVAGGVDVV
EECCCCCCCHHHHHHHHHHHCCCCCEEEEECHHHCCCHHHHHCCCCCCCEEEEECCEEEE
YPPENDGLYRRLITEGAVISETAPGEQPQARHFPRRNRIVSGLSLGVIVVEGAPRSGSLI
ECCCCCCHHHHHHHCCCEEECCCCCCCCHHHCCCHHHHHHCCCEEEEEEEECCCCCCCEE
TARLAADQGREVMAVPGSPLDSRAQGPNGLIKNGAALIEDAADVLRILSPLIARPMAEDK
EEEEECCCCCEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PQNYASAPPSPIADSTIDAARPRVIEALGMSPVGVDEVIRLCTLPPAVVAVVLLELELAG
CCCCCCCCCCCCCCCCHHHHCHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
RLDRLVGNRVCLIA
HHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800 [H]