| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is sspA [C]
Identifier: 83594523
GI number: 83594523
Start: 3682303
End: 3682971
Strand: Direct
Name: sspA [C]
Synonym: Rru_A3193
Alternate gene names: 83594523
Gene position: 3682303-3682971 (Clockwise)
Preceding gene: 83594522
Following gene: 83594524
Centisome position: 84.6
GC content: 67.41
Gene sequence:
>669_bases ATGGCCCATCCCACGCTCGTCATTGGCAACCGCAATTACTCCTCGTGGTCGATGCGGCCGTGGTTCGCCCTGAAGGTCGC CGGGATCGCCTTTGACGAGGTGGTCATTCCGCTCTACGAACCCGGCTCGAAGGAAAAAATGGCGGCGGCCTCGCCCACCG GTAAGGTGCCCTGCCTGATCGACGATGGCCTGACCATCTGGGATTCGCTGGCGATCCTGGACTATCTCGCCGAACGCTTC CCCGAAGCCCACCTGTGGCCCGCCGAGCGCGCCGCCCGTGCCCGGGCGCGGGCCGTCAGCGCCGAGATGCATTCGGGCTT CCAGGCCCTGCGTCAGGCCCTGATCATGAACGTCCGCAAGACCTTTCCGCCCCAACCGCTATCCCCCGAGGTCGAAGCCG ATGTCGCCCGCATCGAGGCGCTGTGGGCCGAGTGTCGGCGCGACTTCGGCCAACAGGGGCCCTTCCTGTTTGGCGCCTTC TCGATCGCCGATGCCATGTATGCCCCGGTGGTCACCCGTCTGCGCACCTATGGGGTGGCGGTCGGCCCCGAGACCAGGGC CTATATGGACGCCATCCTCGCCCTGCCGGCGATGGCCGAATGGGACGCCCTGGCCAAGGCCGAGCCCTGGGTGATCGAAC GCTATGAACCCGCCGCCCCGACCGCCTGA
Upstream 100 bases:
>100_bases CTGACCCTGCGGGGGTCCGCCATTGCCCTCTTCGTTTACTCCCCCTCACACTGCCGACGGGCGGATCCGGCGCGACGCCC CCCTTATAAGGAAAGATGCC
Downstream 100 bases:
>100_bases CCATGGCCCCCGCCGCCCGGCCGCTCACCGCCTCGGAAAAGCTTGACCGCCTGCGCCTGCTGCGCACGGAAAACGTTGGC CCGATCACTTGGCGACGGCT
Product: glutathione S-transferase-like protein
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like; Glutathione-S-Transferase Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase N-Terminal Domain-Containing; Maleylacetoacetate Isomerase; Stringent Starvation Protein A; GSH-Dependent Dehydroascorbate Reductase; Glutathione S-Transferase N-Terminal; Glutathione-S-Tranferase Family Protein
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MAHPTLVIGNRNYSSWSMRPWFALKVAGIAFDEVVIPLYEPGSKEKMAAASPTGKVPCLIDDGLTIWDSLAILDYLAERF PEAHLWPAERAARARARAVSAEMHSGFQALRQALIMNVRKTFPPQPLSPEVEADVARIEALWAECRRDFGQQGPFLFGAF SIADAMYAPVVTRLRTYGVAVGPETRAYMDAILALPAMAEWDALAKAEPWVIERYEPAAPTA
Sequences:
>Translated_222_residues MAHPTLVIGNRNYSSWSMRPWFALKVAGIAFDEVVIPLYEPGSKEKMAAASPTGKVPCLIDDGLTIWDSLAILDYLAERF PEAHLWPAERAARARARAVSAEMHSGFQALRQALIMNVRKTFPPQPLSPEVEADVARIEALWAECRRDFGQQGPFLFGAF SIADAMYAPVVTRLRTYGVAVGPETRAYMDAILALPAMAEWDALAKAEPWVIERYEPAAPTA >Mature_221_residues AHPTLVIGNRNYSSWSMRPWFALKVAGIAFDEVVIPLYEPGSKEKMAAASPTGKVPCLIDDGLTIWDSLAILDYLAERFP EAHLWPAERAARARARAVSAEMHSGFQALRQALIMNVRKTFPPQPLSPEVEADVARIEALWAECRRDFGQQGPFLFGAFS IADAMYAPVVTRLRTYGVAVGPETRAYMDAILALPAMAEWDALAKAEPWVIERYEPAAPTA
Specific function: Forms An Equimolar Complex With The RNA Polymerase Holoenzyme (Rnap) But Not With The Core Enzyme. It Is Synthesized Predominantly When Cells Are Exposed To Amino Acid Starvation, At Which Time It Accounts For Over 50% Of The Total Protein Synthesized. It
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789624, Length=200, Percent_Identity=28, Blast_Score=62, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17551302, Length=108, Percent_Identity=34.2592592592593, Blast_Score=67, Evalue=8e-12,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1982 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24517; Mature: 24386
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHPTLVIGNRNYSSWSMRPWFALKVAGIAFDEVVIPLYEPGSKEKMAAASPTGKVPCLI CCCCEEEEECCCCCCCCCCCEEEEEECCEEHHHEEEEEECCCCCCCEECCCCCCCCCEEE DDGLTIWDSLAILDYLAERFPEAHLWPAERAARARARAVSAEMHSGFQALRQALIMNVRK ECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFPPQPLSPEVEADVARIEALWAECRRDFGQQGPFLFGAFSIADAMYAPVVTRLRTYGVA HCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCEE VGPETRAYMDAILALPAMAEWDALAKAEPWVIERYEPAAPTA ECCCHHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCCCCCCC >Mature Secondary Structure AHPTLVIGNRNYSSWSMRPWFALKVAGIAFDEVVIPLYEPGSKEKMAAASPTGKVPCLI CCCEEEEECCCCCCCCCCCEEEEEECCEEHHHEEEEEECCCCCCCEECCCCCCCCCEEE DDGLTIWDSLAILDYLAERFPEAHLWPAERAARARARAVSAEMHSGFQALRQALIMNVRK ECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFPPQPLSPEVEADVARIEALWAECRRDFGQQGPFLFGAFSIADAMYAPVVTRLRTYGVA HCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCEE VGPETRAYMDAILALPAMAEWDALAKAEPWVIERYEPAAPTA ECCCHHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA