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The map label for this gene is 83594512

Identifier: 83594512

GI number: 83594512

Start: 3673301

End: 3674227

Strand: Direct

Name: 83594512

Synonym: Rru_A3182

Alternate gene names: NA

Gene position: 3673301-3674227 (Clockwise)

Preceding gene: 83594510

Following gene: 83594516

Centisome position: 84.39

GC content: 66.13

Gene sequence:

>927_bases
ATGGTTGAAACGCTGGGGGCCATAGCGCCCGTTTTCCTGATTATTTTGGTCGGATTTTTGTTGCGCCGTTGGAAAGTCCT
TTCCGATGGTTTCTGGCTACCGGCCGAGAAGCTCACCTACTTCATCACCTTCCCCGCCCTGCTCGCCGCCAATCTGGCTG
GCGCCGATCTTCGCGGCGTCGCCTGGGCGCCGGTGGCGGCGGTATCGGTGGGGGGGATCTTTCTCATCGCCGCCCTGATG
CTGGCAGCGAGATCCTTGCTGGCGCGCCGCCTCGCCATCGGCGACCCGGCCTTCACCAGCGTGTTCCAGGGGGCGATCCG
GCCCAATACCTATATCGGGCTGGCTTTGGCGACGGTGCTGTTCGGGCCCTTCGGCGTAACCCTGATGGCCTTGTGCATCG
CCATCGTCGTCCCGCTGGTCAATGTGCTGGCCGTCGCCTGCATGGTCCGCTTCGGTCACGGTCAATCGGCCAGCCTGTCG
GCCATGGCGCGGGGCATCGCCACCAATCCGCTGATTCTCGCCTGCCTTGTCGGTATCGCCATGAACATCGGCGGCCTTGG
CCTGCCGCCGGTTCTCGGTCCGGCCCTGACCATCCTGGGCAGTGCCGCCCTGCCGATCGGATTGCTGGCGGTCGGGGCCG
GCTTATCCGGGGTCGGCCTGCGCCGCGCCGCCCCGGCCCTGCTGGTCTCCTCGGCCGCCAAGCTCGTCCTTCTGCCCGGG
CTGACCTTGATCGGCGCCCTCGCTTTGGGGATGGACGCCCCGACTACGGCGCTTTGCGTGCTTTACGCCGCCTTGCCCTG
CTCGCAATCCTCTTATGTGCTGGCCCGGCAGATGGGCGGTGACGCGACCTTGATGGCGACCGCGATCACCGTCCAAACCC
TGCTGTCGGGACTGTCCATCCCGGTGTTCGTGCTGGCCCTGGTTTAA

Upstream 100 bases:

>100_bases
TATTTTCAGAAAATGCGAATAACCCGATAACGTCACAGAAACGCCATCAGTTCCTAAACATCCCCTTGCCCAAGCCGGTT
TAACGGCGCCAGGAGAAGGA

Downstream 100 bases:

>100_bases
GGCTAATCGTCGTCGAACCAGCCGCGTTCGGCGTTGCGGTGACAGGCCGGACAGGCGGTAATCGACCGGACGCCCCGGGC
GGACAGGCGCTCGGGCGTCA

Product: auxin efflux carrier

Products: NA

Alternate protein names: Permease; Auxin Efflux Carrier Family Protein; Transporter AEC Family; Permease Transmembrane Protein; Efflux Protein; Auxin Efflux Carrier Protein; Membrane Transport Family

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MVETLGAIAPVFLIILVGFLLRRWKVLSDGFWLPAEKLTYFITFPALLAANLAGADLRGVAWAPVAAVSVGGIFLIAALM
LAARSLLARRLAIGDPAFTSVFQGAIRPNTYIGLALATVLFGPFGVTLMALCIAIVVPLVNVLAVACMVRFGHGQSASLS
AMARGIATNPLILACLVGIAMNIGGLGLPPVLGPALTILGSAALPIGLLAVGAGLSGVGLRRAAPALLVSSAAKLVLLPG
LTLIGALALGMDAPTTALCVLYAALPCSQSSYVLARQMGGDATLMATAITVQTLLSGLSIPVFVLALV

Sequences:

>Translated_308_residues
MVETLGAIAPVFLIILVGFLLRRWKVLSDGFWLPAEKLTYFITFPALLAANLAGADLRGVAWAPVAAVSVGGIFLIAALM
LAARSLLARRLAIGDPAFTSVFQGAIRPNTYIGLALATVLFGPFGVTLMALCIAIVVPLVNVLAVACMVRFGHGQSASLS
AMARGIATNPLILACLVGIAMNIGGLGLPPVLGPALTILGSAALPIGLLAVGAGLSGVGLRRAAPALLVSSAAKLVLLPG
LTLIGALALGMDAPTTALCVLYAALPCSQSSYVLARQMGGDATLMATAITVQTLLSGLSIPVFVLALV
>Mature_308_residues
MVETLGAIAPVFLIILVGFLLRRWKVLSDGFWLPAEKLTYFITFPALLAANLAGADLRGVAWAPVAAVSVGGIFLIAALM
LAARSLLARRLAIGDPAFTSVFQGAIRPNTYIGLALATVLFGPFGVTLMALCIAIVVPLVNVLAVACMVRFGHGQSASLS
AMARGIATNPLILACLVGIAMNIGGLGLPPVLGPALTILGSAALPIGLLAVGAGLSGVGLRRAAPALLVSSAAKLVLLPG
LTLIGALALGMDAPTTALCVLYAALPCSQSSYVLARQMGGDATLMATAITVQTLLSGLSIPVFVLALV

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31186; Mature: 31186

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVETLGAIAPVFLIILVGFLLRRWKVLSDGFWLPAEKLTYFITFPALLAANLAGADLRGV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
AWAPVAAVSVGGIFLIAALMLAARSLLARRLAIGDPAFTSVFQGAIRPNTYIGLALATVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHH
FGPFGVTLMALCIAIVVPLVNVLAVACMVRFGHGQSASLSAMARGIATNPLILACLVGIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHH
MNIGGLGLPPVLGPALTILGSAALPIGLLAVGAGLSGVGLRRAAPALLVSSAAKLVLLPG
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
LTLIGALALGMDAPTTALCVLYAALPCSQSSYVLARQMGGDATLMATAITVQTLLSGLSI
HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCH
PVFVLALV
HHHHHHHC
>Mature Secondary Structure
MVETLGAIAPVFLIILVGFLLRRWKVLSDGFWLPAEKLTYFITFPALLAANLAGADLRGV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
AWAPVAAVSVGGIFLIAALMLAARSLLARRLAIGDPAFTSVFQGAIRPNTYIGLALATVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHH
FGPFGVTLMALCIAIVVPLVNVLAVACMVRFGHGQSASLSAMARGIATNPLILACLVGIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHH
MNIGGLGLPPVLGPALTILGSAALPIGLLAVGAGLSGVGLRRAAPALLVSSAAKLVLLPG
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
LTLIGALALGMDAPTTALCVLYAALPCSQSSYVLARQMGGDATLMATAITVQTLLSGLSI
HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCH
PVFVLALV
HHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA