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The map label for this gene is rpfG [H]

Identifier: 83594510

GI number: 83594510

Start: 3671580

End: 3672764

Strand: Direct

Name: rpfG [H]

Synonym: Rru_A3180

Alternate gene names: 83594510

Gene position: 3671580-3672764 (Clockwise)

Preceding gene: 83594508

Following gene: 83594512

Centisome position: 84.35

GC content: 61.18

Gene sequence:

>1185_bases
ATGAGCACGGCGCTTTTCCATCATCATTCGACCCTGCAAGACCAGTTGGTGGCGATCCATGCCGCCTTGCGCGCGTCGCT
TCCCGACATCGACCGTATCGCCGTCGCCATCTACGACACCAAGACCGACGCCTTGCATACCTTCATCCATTCCAGCGACG
GGCGTCACCCCCTCGACAGCTACGCCACCACCCTGACCGGCGTTCCCTCGCTCGCCGCCCTGGCGACCAGTGGTCGAATC
CGCGTTCTGAATGATCTTTCCCCGCTTGCTCTGACCGGCGCCCATCACACCCAAGTGATCGCCAAGGCCTATCGATCAAG
TTTGACCGTCCCTTTTTATAAGGGGAAGGCCCTCAGCGGGTTTCTCTTCTTCAATTCCCAACAGCCCGATTATTTCACGT
CGCGGCGCATCGATACCTTGGCCCTGGCCGCCGAAATGATCTGCTCGCGGGTCATCGACACGGTCATTTCCGTTGAAATG
CTGACCAGCACCATTCAAATCGCCAAGGATATCAGCCATTTCCGCGACGAGGAAACCGGCGCCCACCTCGACCGCGTCGC
CAATTACGCCCGGCTGATCGCCGAGACCATGGGCAAGGAGCCAAGCGCCCTGCCGCCGGGACGCCACCCGGTTCTTGACG
ACGAATTCGCCCAGATGATCTTCCTGTTCGCCCCGCTTCACGATATCGGCAAGGTGGCCATTCCCGATCACGTTCTGCTC
AAGCCCGGCCCGCTGACCCCCGAGGAACGGACGATCATGCGGACCCATTCCGACAAGGGACTGGCAATCTGCCGACGCAT
TCTTGAAAACGTCGATTTCATCTCGGGCACCCAGGCCGCCATGCTCTGTGACATCGTTCACGCCCACCACGAAGCCTGGG
ATGGCAGCGGCTATCCGCGCGGATTATCCGGGGCCGATATCCCGCTTGCCGCCGCCATCGTCACCGTCGCCGATGTCTTC
GACGCGCTGACCAGCGCCCGCCCCTATAAGAAGCCCTGGTCGACGGAAGACGCCTTCGCTTATCTCCAGGAGAAATCAGG
CCAGTTGTTCAACCCGGCCTGCGTTCGCGCCTTTCTCGCCCACCGGGACGACGTCCTGGCCATTCGGGCGCGCTTCCGCG
ACGAGGTCATCCCCGAAGCCTTCCAAACGCCCCAAACACCCCAATCGAAAGCCGATAAGGTATAG

Upstream 100 bases:

>100_bases
GTGGCTCGATACTCCCCTTCCCGCCTTTCAGGCTCGACTTTCAGATGTGGCTTTCACGGCCCTCATCCTTATTTCCTATT
CCTTTTGGACCGCAACGGCC

Downstream 100 bases:

>100_bases
GCGCGATGACGCGGACGGCAGGCGCCGCTCATCTTGGCAGACGCTCTCGGGTGCTTTCAGTCCGCCCATAGCCATCGCGG
TCGGCGCGCTCTTCGGCCCC

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MSTALFHHHSTLQDQLVAIHAALRASLPDIDRIAVAIYDTKTDALHTFIHSSDGRHPLDSYATTLTGVPSLAALATSGRI
RVLNDLSPLALTGAHHTQVIAKAYRSSLTVPFYKGKALSGFLFFNSQQPDYFTSRRIDTLALAAEMICSRVIDTVISVEM
LTSTIQIAKDISHFRDEETGAHLDRVANYARLIAETMGKEPSALPPGRHPVLDDEFAQMIFLFAPLHDIGKVAIPDHVLL
KPGPLTPEERTIMRTHSDKGLAICRRILENVDFISGTQAAMLCDIVHAHHEAWDGSGYPRGLSGADIPLAAAIVTVADVF
DALTSARPYKKPWSTEDAFAYLQEKSGQLFNPACVRAFLAHRDDVLAIRARFRDEVIPEAFQTPQTPQSKADKV

Sequences:

>Translated_394_residues
MSTALFHHHSTLQDQLVAIHAALRASLPDIDRIAVAIYDTKTDALHTFIHSSDGRHPLDSYATTLTGVPSLAALATSGRI
RVLNDLSPLALTGAHHTQVIAKAYRSSLTVPFYKGKALSGFLFFNSQQPDYFTSRRIDTLALAAEMICSRVIDTVISVEM
LTSTIQIAKDISHFRDEETGAHLDRVANYARLIAETMGKEPSALPPGRHPVLDDEFAQMIFLFAPLHDIGKVAIPDHVLL
KPGPLTPEERTIMRTHSDKGLAICRRILENVDFISGTQAAMLCDIVHAHHEAWDGSGYPRGLSGADIPLAAAIVTVADVF
DALTSARPYKKPWSTEDAFAYLQEKSGQLFNPACVRAFLAHRDDVLAIRARFRDEVIPEAFQTPQTPQSKADKV
>Mature_393_residues
STALFHHHSTLQDQLVAIHAALRASLPDIDRIAVAIYDTKTDALHTFIHSSDGRHPLDSYATTLTGVPSLAALATSGRIR
VLNDLSPLALTGAHHTQVIAKAYRSSLTVPFYKGKALSGFLFFNSQQPDYFTSRRIDTLALAAEMICSRVIDTVISVEML
TSTIQIAKDISHFRDEETGAHLDRVANYARLIAETMGKEPSALPPGRHPVLDDEFAQMIFLFAPLHDIGKVAIPDHVLLK
PGPLTPEERTIMRTHSDKGLAICRRILENVDFISGTQAAMLCDIVHAHHEAWDGSGYPRGLSGADIPLAAAIVTVADVFD
ALTSARPYKKPWSTEDAFAYLQEKSGQLFNPACVRAFLAHRDDVLAIRARFRDEVIPEAFQTPQTPQSKADKV

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 43260; Mature: 43129

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTALFHHHSTLQDQLVAIHAALRASLPDIDRIAVAIYDTKTDALHTFIHSSDGRHPLDS
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCHHH
YATTLTGVPSLAALATSGRIRVLNDLSPLALTGAHHTQVIAKAYRSSLTVPFYKGKALSG
HHHHHHCCCHHHHHHCCCCEEEECCCCCCEECCCHHHHHHHHHHHHCCCCEEECCCCEEE
FLFFNSQQPDYFTSRRIDTLALAAEMICSRVIDTVISVEMLTSTIQIAKDISHFRDEETG
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC
AHLDRVANYARLIAETMGKEPSALPPGRHPVLDDEFAQMIFLFAPLHDIGKVAIPDHVLL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHCCCCCCCCEEE
KPGPLTPEERTIMRTHSDKGLAICRRILENVDFISGTQAAMLCDIVHAHHEAWDGSGYPR
CCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
GLSGADIPLAAAIVTVADVFDALTSARPYKKPWSTEDAFAYLQEKSGQLFNPACVRAFLA
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
HRDDVLAIRARFRDEVIPEAFQTPQTPQSKADKV
CCCCHHHHHHHHHHHHCHHHHCCCCCCCHHCCCC
>Mature Secondary Structure 
STALFHHHSTLQDQLVAIHAALRASLPDIDRIAVAIYDTKTDALHTFIHSSDGRHPLDS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCHHH
YATTLTGVPSLAALATSGRIRVLNDLSPLALTGAHHTQVIAKAYRSSLTVPFYKGKALSG
HHHHHHCCCHHHHHHCCCCEEEECCCCCCEECCCHHHHHHHHHHHHCCCCEEECCCCEEE
FLFFNSQQPDYFTSRRIDTLALAAEMICSRVIDTVISVEMLTSTIQIAKDISHFRDEETG
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC
AHLDRVANYARLIAETMGKEPSALPPGRHPVLDDEFAQMIFLFAPLHDIGKVAIPDHVLL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHCCCCCCCCEEE
KPGPLTPEERTIMRTHSDKGLAICRRILENVDFISGTQAAMLCDIVHAHHEAWDGSGYPR
CCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
GLSGADIPLAAAIVTVADVFDALTSARPYKKPWSTEDAFAYLQEKSGQLFNPACVRAFLA
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
HRDDVLAIRARFRDEVIPEAFQTPQTPQSKADKV
CCCCHHHHHHHHHHHHCHHHHCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]