| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594481
Identifier: 83594481
GI number: 83594481
Start: 3635897
End: 3637894
Strand: Reverse
Name: 83594481
Synonym: Rru_A3151
Alternate gene names: NA
Gene position: 3637894-3635897 (Counterclockwise)
Preceding gene: 83594482
Following gene: 83594480
Centisome position: 83.58
GC content: 64.46
Gene sequence:
>1998_bases ATGACCTCCCTTGCCCGTAGCCTCGCCCTGATCGTCTTTGGCCTGGGGGTGGCGCTGTCGCTGCCCGAGGCCCACGCCGA GGCCCGCCATCCGCTGCTGATCGAGGGCAAGACCGAGCTGTTCCAGCGCGTATTGACCCGTCCGGGCGCCCAACTGACCC CGGTGGCCGGCGCGCCCTCCAAGCTTGATCCCTTCACCCCGCTGTTCGTCTATGGCCGGCAGCCCAAGGACGGCGGCGCC GCCCTGCTGGAAGTCGGCACCGACGCCAAGGGCACGGTGATCGGTTTTCTGCCCGAAACCGACGCGGTGGAATGGTCCCA CGCCCTGGTCCTGGCCTTTTCCCAGCCGATCGGCCGCGAGCGCACCTTGTTCTTCAAGGACAAGGCCGGGCTGGAGTCTT GGCAGGATTCGCCCGAGCTTCTGGTCAAGGCCCGCGAGGCGCGAAGCCTGATCGATGCCGGAACCCTGCCCGCCGGTAGC CCGGTTGTTTCGATCGAACCCAAGGAATTCATCGACTTCGAGAAGAATTTCTACATGCTGCCGATCCTTCAGGCCGAGCG CAAACGCCTGAACACCGGCTTTCGCGTGCGTAATGTCGAAGTCGCCAGCGTGACCAGCGAGGAAACCAGCGAAAGCCGCG AGCGGCCGCTCAAGCGGCGGATGAATGTCGCCGCCATGGCCGATTTCCGCGCCGGGGTGGTCTTTGTCATCGACGCCTCC AGCTCGATGGATCCCTATATCGACAAGACCCGTCAGGTAATGGACGACGTGCTCAAGCGCGTTCAGGCCGAAGGTCTGGC CGACAAGGTGCGCTTCGGTCTGGTCGCCTTCCGCGACGACCCCAAGAAGGTCAAGGGTGTCGAATATCTGACGCGCACCT TCGCCGATCCCAATTCCACGGCTGATGCCAAGGCTTTTTCCAAGGCGATCGCGCCGCTGAAGGCCACGCCGATTTCCACC CGGGCCTTCGCCGAGGATTCCTTCGCCGCCATCGATACGGCGCTCAACACCATCGACTGGAGCGGCTTCGCCGCCCGCTA TCTGATCTTGGTCACCGACGCCAGTTCGCGCGGCGCCCGCGCAGAGATCGTCGATGGCAAAACGGTGCCACCCTCGGCCA CCTTGCTGGATGTCGAGGGGATGAACCAGCTTGTGCGCGGCAAGAAGGCCGCCCTTTACGCTTTCCATCTGAAGACCCCG GCGGGGGCTGCCGATCATGCGCGGGCCGAGGCCCAATACCGCATCCTCAGCCGCTATGAGAATGCGCCGTCGCTGTATTA TCCGGTTCCCGCCGGCGACGAGGCCGCCTTTGGCGCCGCCGTCACCACCCTGGCCGATGCCCTGGTCGCCCAGGTGCGCG ACGCCGAGAAGACCCTAGCCGAACCCGACGCGGCGCAAGATCCCAAGCCTGTCGCCAAAGGGCCCCTTGATCTGACCCAA TCGGCGCGCATGGTCGGCCGCGCCATGGCCCTGGCCCATCTCGGCCGGGCCGAGGGGGTGGCCGCGCCGTCGATGTTCCG CGCCTGGGCCTCGGATCGCGATTTCGCCAATCCCGACACGGCCAATTTCTCGGTCCGCGTTCTGCTCTCGAAGAACCAGT TGTCCGATCTGCAAAAGACCCTGCAGCTGACCGTCGAGGCTTTGGAGAAAGGCCAGATCGATCCGGGTGATTTTTTCAAT CAGCTGCGCTCGGCGGCGCTGTCGGCGGGGCGTGACCCGTCGAAGGTTGGCCAGGGCACGGCGCGCAATATGGAAAGCGC CGGACTGGTTTCCGAATATCTTGACGGGCTGCCTTATCAAAGCCGGCTGATGGGGCTGTCGCAAGACGACTGGATCGCCA TGGGCGTGGCCGAGCAGCAGGCGATCATCGACGCCACCTATGCCAAGGTTCAGCTTTATCAGAAATACCATGATGATAAC GACCACTGGATCGCGCTGACCCCCGGGGCCGAGCCGGGCGATACGGTGTTTCCCGTTCCCATCGATTCCCTGCCCTAA
Upstream 100 bases:
>100_bases GCTCGGGCCGGACCTCGCGGGCCGATGGCCCGGAAGCCGCGGTGTTTTGGGAAAACGCCGCCGCCAATGCGCCCACCGCC CCCGTCGGAGCCGCCAAGCC
Downstream 100 bases:
>100_bases GCCATGGATCGGGTGGTTCTGCTTGATGGGGTGGTCGCCGGCAAGGGCGAGCGCTTCCGCGTGCGCATGAGCGGTTTTCG CGTCGGCGCCGGTGAAACCG
Product: serine/threonine protein kinase
Products: NA
Alternate protein names: PpkA-Related Protein; Serine/Threonine Protein Kinase; Serine/Threonine Protein Kinase PpkA; Von Willebrand Factor Type A Domain-Containing Protein; Protein Kinase; Exported Protein
Number of amino acids: Translated: 665; Mature: 664
Protein sequence:
>665_residues MTSLARSLALIVFGLGVALSLPEAHAEARHPLLIEGKTELFQRVLTRPGAQLTPVAGAPSKLDPFTPLFVYGRQPKDGGA ALLEVGTDAKGTVIGFLPETDAVEWSHALVLAFSQPIGRERTLFFKDKAGLESWQDSPELLVKAREARSLIDAGTLPAGS PVVSIEPKEFIDFEKNFYMLPILQAERKRLNTGFRVRNVEVASVTSEETSESRERPLKRRMNVAAMADFRAGVVFVIDAS SSMDPYIDKTRQVMDDVLKRVQAEGLADKVRFGLVAFRDDPKKVKGVEYLTRTFADPNSTADAKAFSKAIAPLKATPIST RAFAEDSFAAIDTALNTIDWSGFAARYLILVTDASSRGARAEIVDGKTVPPSATLLDVEGMNQLVRGKKAALYAFHLKTP AGAADHARAEAQYRILSRYENAPSLYYPVPAGDEAAFGAAVTTLADALVAQVRDAEKTLAEPDAAQDPKPVAKGPLDLTQ SARMVGRAMALAHLGRAEGVAAPSMFRAWASDRDFANPDTANFSVRVLLSKNQLSDLQKTLQLTVEALEKGQIDPGDFFN QLRSAALSAGRDPSKVGQGTARNMESAGLVSEYLDGLPYQSRLMGLSQDDWIAMGVAEQQAIIDATYAKVQLYQKYHDDN DHWIALTPGAEPGDTVFPVPIDSLP
Sequences:
>Translated_665_residues MTSLARSLALIVFGLGVALSLPEAHAEARHPLLIEGKTELFQRVLTRPGAQLTPVAGAPSKLDPFTPLFVYGRQPKDGGA ALLEVGTDAKGTVIGFLPETDAVEWSHALVLAFSQPIGRERTLFFKDKAGLESWQDSPELLVKAREARSLIDAGTLPAGS PVVSIEPKEFIDFEKNFYMLPILQAERKRLNTGFRVRNVEVASVTSEETSESRERPLKRRMNVAAMADFRAGVVFVIDAS SSMDPYIDKTRQVMDDVLKRVQAEGLADKVRFGLVAFRDDPKKVKGVEYLTRTFADPNSTADAKAFSKAIAPLKATPIST RAFAEDSFAAIDTALNTIDWSGFAARYLILVTDASSRGARAEIVDGKTVPPSATLLDVEGMNQLVRGKKAALYAFHLKTP AGAADHARAEAQYRILSRYENAPSLYYPVPAGDEAAFGAAVTTLADALVAQVRDAEKTLAEPDAAQDPKPVAKGPLDLTQ SARMVGRAMALAHLGRAEGVAAPSMFRAWASDRDFANPDTANFSVRVLLSKNQLSDLQKTLQLTVEALEKGQIDPGDFFN QLRSAALSAGRDPSKVGQGTARNMESAGLVSEYLDGLPYQSRLMGLSQDDWIAMGVAEQQAIIDATYAKVQLYQKYHDDN DHWIALTPGAEPGDTVFPVPIDSLP >Mature_664_residues TSLARSLALIVFGLGVALSLPEAHAEARHPLLIEGKTELFQRVLTRPGAQLTPVAGAPSKLDPFTPLFVYGRQPKDGGAA LLEVGTDAKGTVIGFLPETDAVEWSHALVLAFSQPIGRERTLFFKDKAGLESWQDSPELLVKAREARSLIDAGTLPAGSP VVSIEPKEFIDFEKNFYMLPILQAERKRLNTGFRVRNVEVASVTSEETSESRERPLKRRMNVAAMADFRAGVVFVIDASS SMDPYIDKTRQVMDDVLKRVQAEGLADKVRFGLVAFRDDPKKVKGVEYLTRTFADPNSTADAKAFSKAIAPLKATPISTR AFAEDSFAAIDTALNTIDWSGFAARYLILVTDASSRGARAEIVDGKTVPPSATLLDVEGMNQLVRGKKAALYAFHLKTPA GAADHARAEAQYRILSRYENAPSLYYPVPAGDEAAFGAAVTTLADALVAQVRDAEKTLAEPDAAQDPKPVAKGPLDLTQS ARMVGRAMALAHLGRAEGVAAPSMFRAWASDRDFANPDTANFSVRVLLSKNQLSDLQKTLQLTVEALEKGQIDPGDFFNQ LRSAALSAGRDPSKVGQGTARNMESAGLVSEYLDGLPYQSRLMGLSQDDWIAMGVAEQQAIIDATYAKVQLYQKYHDDND HWIALTPGAEPGDTVFPVPIDSLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71973; Mature: 71842
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLARSLALIVFGLGVALSLPEAHAEARHPLLIEGKTELFQRVLTRPGAQLTPVAGAPS CCHHHHHHHHHHHHHHHHEECCHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCCCCCCC KLDPFTPLFVYGRQPKDGGAALLEVGTDAKGTVIGFLPETDAVEWSHALVLAFSQPIGRE CCCCCCCEEEECCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCC RTLFFKDKAGLESWQDSPELLVKAREARSLIDAGTLPAGSPVVSIEPKEFIDFEKNFYML CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHCCCCCEEEE PILQAERKRLNTGFRVRNVEVASVTSEETSESRERPLKRRMNVAAMADFRAGVVFVIDAS EEHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEECC SSMDPYIDKTRQVMDDVLKRVQAEGLADKVRFGLVAFRDDPKKVKGVEYLTRTFADPNST CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEECCCHHHHHHHHHHHHHCCCCCCC ADAKAFSKAIAPLKATPISTRAFAEDSFAAIDTALNTIDWSGFAARYLILVTDASSRGAR CHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCE AEIVDGKTVPPSATLLDVEGMNQLVRGKKAALYAFHLKTPAGAADHARAEAQYRILSRYE EEEECCCCCCCCCEEEEHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHC NAPSLYYPVPAGDEAAFGAAVTTLADALVAQVRDAEKTLAEPDAAQDPKPVAKGPLDLTQ CCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH SARMVGRAMALAHLGRAEGVAAPSMFRAWASDRDFANPDTANFSVRVLLSKNQLSDLQKT HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEECHHHHHHHHH LQLTVEALEKGQIDPGDFFNQLRSAALSAGRDPSKVGQGTARNMESAGLVSEYLDGLPYQ HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHCCCHHHHHHHHHHCCCCHH SRLMGLSQDDWIAMGVAEQQAIIDATYAKVQLYQKYHDDNDHWIALTPGAEPGDTVFPVP HHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEECCC IDSLP CCCCC >Mature Secondary Structure TSLARSLALIVFGLGVALSLPEAHAEARHPLLIEGKTELFQRVLTRPGAQLTPVAGAPS CHHHHHHHHHHHHHHHHEECCHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCCCCCCC KLDPFTPLFVYGRQPKDGGAALLEVGTDAKGTVIGFLPETDAVEWSHALVLAFSQPIGRE CCCCCCCEEEECCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCC RTLFFKDKAGLESWQDSPELLVKAREARSLIDAGTLPAGSPVVSIEPKEFIDFEKNFYML CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHCCCCCEEEE PILQAERKRLNTGFRVRNVEVASVTSEETSESRERPLKRRMNVAAMADFRAGVVFVIDAS EEHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEECC SSMDPYIDKTRQVMDDVLKRVQAEGLADKVRFGLVAFRDDPKKVKGVEYLTRTFADPNST CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEECCCHHHHHHHHHHHHHCCCCCCC ADAKAFSKAIAPLKATPISTRAFAEDSFAAIDTALNTIDWSGFAARYLILVTDASSRGAR CHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCE AEIVDGKTVPPSATLLDVEGMNQLVRGKKAALYAFHLKTPAGAADHARAEAQYRILSRYE EEEECCCCCCCCCEEEEHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHC NAPSLYYPVPAGDEAAFGAAVTTLADALVAQVRDAEKTLAEPDAAQDPKPVAKGPLDLTQ CCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH SARMVGRAMALAHLGRAEGVAAPSMFRAWASDRDFANPDTANFSVRVLLSKNQLSDLQKT HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEECHHHHHHHHH LQLTVEALEKGQIDPGDFFNQLRSAALSAGRDPSKVGQGTARNMESAGLVSEYLDGLPYQ HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHCCCHHHHHHHHHHCCCCHH SRLMGLSQDDWIAMGVAEQQAIIDATYAKVQLYQKYHDDNDHWIALTPGAEPGDTVFPVP HHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEECCC IDSLP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA