| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594323
Identifier: 83594323
GI number: 83594323
Start: 3445396
End: 3446841
Strand: Reverse
Name: 83594323
Synonym: Rru_A2993
Alternate gene names: NA
Gene position: 3446841-3445396 (Counterclockwise)
Preceding gene: 83594324
Following gene: 83594321
Centisome position: 79.19
GC content: 53.18
Gene sequence:
>1446_bases ATGACTGATGCCGCCGAGATTCGCCGGGCCATCGTCGACGCCCTGCCGATCACGACATCCAACTATGGGGAATTACCCGA TTTAGGCCAAGTCTACGTGCCGCCCTCGCATCTTAGGGCGCTTCGCTTGGACTGCAATCTGGTGATCGGTGCGCGTGGTG TCGGGAAGTCATTTTGGGCCTCTGCCCTCCGCTTAGAAGGCGTGCGCCAACAACTTGGGGAATCGCTTTCCCCTCTTACG AAGACCGATGTGTTCGCGGGTTTTGGAACGCAGCCGGATATCGAGTTCTACCCGGATGGAGACACGTTCTCCGGCATCCT CTCTCAAGAGCGGACGCCCTATGATGTCTGGCGCGCGGTGGTCGCTCGACGGCTTTCTGCCATCATCGGATTAGATATTC CTAAAGGGACTTGGAAAGAGACTGTGGATTGGGTTTCTAAAAACCCGGAACCCTTTGCTCTTCTTCAGCAAAATGCCAAT ATATTCTTTCGGGACGAAGGAAAGGCTTGTCTTATCGTATTCGATGCACTCGATCGGACAAGTTCCGATTGGCGTACGAT GGACAATATTGTCCGAGAATTATTGCGCGTTATTCTTCAGATGAAAGCGCACTCCCTGTTGCATGGTAAGGTGTTTCTTC GGGAGGATCAGTTTCATCGCACCATCACGGACTTCCCGGACGCCTCGAAGCTGCTGACAACCCGTGTCGAGTTGTCATGG GCTCCTCATGATTTACATGGATTGCTATGGCAATTACTTTGTAATGCTTCTGGGAAATCAGGGGAATGCCTTAGAGGCGT CTATAAATCTGTACTGGAAGAAGCCCCAATCGAGCAGGCGGGCGTTTGGCTCCTGCGAGAAGACTCCAAACGCGAAGGAA AAGCTCAAAGAGAGCTTTTTGAAAGGCTTGCGGGGAAATGGATGGGGCGAGACCGTCGACGGGGAATTCCATACACGTGG TCGGTAAGCCATCTGGAAGATGCGCGCCGACATGCGTCACCCCGCTCCTTCATTGCAGCTATCGGGACCGCCGCCGATGT GTCTAACCAGCGGTATCCAGAGCACTCCTACCCTTTGCATTACGAAAGCATCAAGCTCGGCGTTCAGAAGGCTTCTGAAA TACGAGTTTCGGAAATGGCCGAAGACTACCAATGGGTTAAAACCCTGATGGAGCCGTTGAGAGGGATCACAGTGCCGTGC GACTTCAGCATGATAGAAGAGTGCTGGAACACCTCCTTTCCTCAAGGCGCAGGTGATATCGGATCAAATCATCTGCCCCC TCAGCGTATCGAGCAGGGGTGGCAAGGAATTCGCGAGGACCTTCAAGGCCTGGGAATCTTTGAAGCGATGAAAGACGGTC GTCTTAATATGCCCGATCTTTACCGAGTCGGATTCGGATTAGGACGACGAGGCGGTGTCAAGCCTATGAGAGCCGGTTCT AGGTAA
Upstream 100 bases:
>100_bases ACAATCGCTTTGATACGGTCGACGCCGAACAGGTCAACTACGTTTTTGGAGACTTTTTAACGGGGCTCGCGGCTTCGGTG CAAAACGAGGAAGATGAGCG
Downstream 100 bases:
>100_bases TACCTGTCACCCCCCTCACCCCTGCTTGGGCTTGACCACCTCATAGAGCGTCACCGGCATCGCCGAGCGCCAGCCGTGGA AGCGGCCGACGGGGTCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 481; Mature: 480
Protein sequence:
>481_residues MTDAAEIRRAIVDALPITTSNYGELPDLGQVYVPPSHLRALRLDCNLVIGARGVGKSFWASALRLEGVRQQLGESLSPLT KTDVFAGFGTQPDIEFYPDGDTFSGILSQERTPYDVWRAVVARRLSAIIGLDIPKGTWKETVDWVSKNPEPFALLQQNAN IFFRDEGKACLIVFDALDRTSSDWRTMDNIVRELLRVILQMKAHSLLHGKVFLREDQFHRTITDFPDASKLLTTRVELSW APHDLHGLLWQLLCNASGKSGECLRGVYKSVLEEAPIEQAGVWLLREDSKREGKAQRELFERLAGKWMGRDRRRGIPYTW SVSHLEDARRHASPRSFIAAIGTAADVSNQRYPEHSYPLHYESIKLGVQKASEIRVSEMAEDYQWVKTLMEPLRGITVPC DFSMIEECWNTSFPQGAGDIGSNHLPPQRIEQGWQGIREDLQGLGIFEAMKDGRLNMPDLYRVGFGLGRRGGVKPMRAGS R
Sequences:
>Translated_481_residues MTDAAEIRRAIVDALPITTSNYGELPDLGQVYVPPSHLRALRLDCNLVIGARGVGKSFWASALRLEGVRQQLGESLSPLT KTDVFAGFGTQPDIEFYPDGDTFSGILSQERTPYDVWRAVVARRLSAIIGLDIPKGTWKETVDWVSKNPEPFALLQQNAN IFFRDEGKACLIVFDALDRTSSDWRTMDNIVRELLRVILQMKAHSLLHGKVFLREDQFHRTITDFPDASKLLTTRVELSW APHDLHGLLWQLLCNASGKSGECLRGVYKSVLEEAPIEQAGVWLLREDSKREGKAQRELFERLAGKWMGRDRRRGIPYTW SVSHLEDARRHASPRSFIAAIGTAADVSNQRYPEHSYPLHYESIKLGVQKASEIRVSEMAEDYQWVKTLMEPLRGITVPC DFSMIEECWNTSFPQGAGDIGSNHLPPQRIEQGWQGIREDLQGLGIFEAMKDGRLNMPDLYRVGFGLGRRGGVKPMRAGS R >Mature_480_residues TDAAEIRRAIVDALPITTSNYGELPDLGQVYVPPSHLRALRLDCNLVIGARGVGKSFWASALRLEGVRQQLGESLSPLTK TDVFAGFGTQPDIEFYPDGDTFSGILSQERTPYDVWRAVVARRLSAIIGLDIPKGTWKETVDWVSKNPEPFALLQQNANI FFRDEGKACLIVFDALDRTSSDWRTMDNIVRELLRVILQMKAHSLLHGKVFLREDQFHRTITDFPDASKLLTTRVELSWA PHDLHGLLWQLLCNASGKSGECLRGVYKSVLEEAPIEQAGVWLLREDSKREGKAQRELFERLAGKWMGRDRRRGIPYTWS VSHLEDARRHASPRSFIAAIGTAADVSNQRYPEHSYPLHYESIKLGVQKASEIRVSEMAEDYQWVKTLMEPLRGITVPCD FSMIEECWNTSFPQGAGDIGSNHLPPQRIEQGWQGIREDLQGLGIFEAMKDGRLNMPDLYRVGFGLGRRGGVKPMRAGSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54260; Mature: 54129
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAAEIRRAIVDALPITTSNYGELPDLGQVYVPPSHLRALRLDCNLVIGARGVGKSFWA CCCHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCHHHHHEEEECCEEEEECCCCCHHHHH SALRLEGVRQQLGESLSPLTKTDVFAGFGTQPDIEFYPDGDTFSGILSQERTPYDVWRAV HHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEECCCCCHHHHHHHCCCCCHHHHHHH VARRLSAIIGLDIPKGTWKETVDWVSKNPEPFALLQQNANIFFRDEGKACLIVFDALDRT HHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCEEEEECCCEEEEEEECCCCC SSDWRTMDNIVRELLRVILQMKAHSLLHGKVFLREDQFHRTITDFPDASKLLTTRVELSW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHCCCCHHHHHHHHEEEEC APHDLHGLLWQLLCNASGKSGECLRGVYKSVLEEAPIEQAGVWLLREDSKREGKAQRELF CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHCEEEEECCCHHCCHHHHHHH ERLAGKWMGRDRRRGIPYTWSVSHLEDARRHASPRSFIAAIGTAADVSNQRYPEHSYPLH HHHHHHHCCCHHCCCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCC YESIKLGVQKASEIRVSEMAEDYQWVKTLMEPLRGITVPCDFSMIEECWNTSFPQGAGDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCC GSNHLPPQRIEQGWQGIREDLQGLGIFEAMKDGRLNMPDLYRVGFGLGRRGGVKPMRAGS CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCC R C >Mature Secondary Structure TDAAEIRRAIVDALPITTSNYGELPDLGQVYVPPSHLRALRLDCNLVIGARGVGKSFWA CCHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCHHHHHEEEECCEEEEECCCCCHHHHH SALRLEGVRQQLGESLSPLTKTDVFAGFGTQPDIEFYPDGDTFSGILSQERTPYDVWRAV HHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEECCCCCHHHHHHHCCCCCHHHHHHH VARRLSAIIGLDIPKGTWKETVDWVSKNPEPFALLQQNANIFFRDEGKACLIVFDALDRT HHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCEEEEECCCEEEEEEECCCCC SSDWRTMDNIVRELLRVILQMKAHSLLHGKVFLREDQFHRTITDFPDASKLLTTRVELSW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHCCCCHHHHHHHHEEEEC APHDLHGLLWQLLCNASGKSGECLRGVYKSVLEEAPIEQAGVWLLREDSKREGKAQRELF CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHCEEEEECCCHHCCHHHHHHH ERLAGKWMGRDRRRGIPYTWSVSHLEDARRHASPRSFIAAIGTAADVSNQRYPEHSYPLH HHHHHHHCCCHHCCCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCC YESIKLGVQKASEIRVSEMAEDYQWVKTLMEPLRGITVPCDFSMIEECWNTSFPQGAGDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCC GSNHLPPQRIEQGWQGIREDLQGLGIFEAMKDGRLNMPDLYRVGFGLGRRGGVKPMRAGS CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA