| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is crtF [H]
Identifier: 83594312
GI number: 83594312
Start: 3433496
End: 3434686
Strand: Reverse
Name: crtF [H]
Synonym: Rru_A2982
Alternate gene names: 83594312
Gene position: 3434686-3433496 (Counterclockwise)
Preceding gene: 83594313
Following gene: 83594311
Centisome position: 78.91
GC content: 67.93
Gene sequence:
>1191_bases ATGAAAACACTGTCTTCCCATGCCGTTTCCGACGCCCTGACCGGGTGGCGCGACCGTCTTCTGACCAATGACCGCTTCCA GTATTGGGCGATGCGCCTGCCGGGGCTGCGCACGATCGCCCGGCGCCGGGCGCGCTCGTTGTTCGATCTCTGCGCCGGCT TCGTCTATTCCCAGGTGCTTGACGCCTGCGTTCGTTTGGATCTGTTGCCGGTTCTGGCCGAAGGGCCGCAGACGGCGACG GTGGTGGCCGAGCGCATCGCCCTGCCGGTCGAAGGGGCGCGGCGTCTGCTTGAGGCGGCGGTGTCGCTCGATCTGGTCGA GCGGCGACGCGGCGGCCGATTCGGTCTGGGGGCGCTGGGGGCGGCGATGCTGGGCAACCCGGCGGTGTTGGCCATGGTGC GCCATCATGGGTTGTTCTATCAAGACATGCGCGATCCGGTGGCCCTGCTGCGCGGCGAAGCCGGAGAGACGGCGCTGTCG CGCTATTGGGCCTATGCCCGTTCCCAGGCTCCCGACGAGTTGGCCGAGCCGGCGGTGAGCGATTATTCGGCTTTGATGAG CGCCTCGCAGGCTTTGGTCGCCGACGAGATTCTTGACGCGGTGCCGCTGGGCAATGCGCGTTGCCTGATGGATATCGGTG GCGGCGAGGGTGGCTTCATGGCCGCGGTGCTTGGCCGCTATCCGAAGATTCGCGGCATCGTCTTCGATCTGCAATCGGTG GCCGATCGCGCCGCCGACCGCCTGGACGCCGCCGGATTCGAACCCCGCGTGCGAGTCGCCGGCGGCGACTTCCGAGTCGA TCCGCTGCCCACCGAGTCGGATGTCATGACCCTGGTCCGCGTCGTTCACGATCACGATGACGACACGGTGCGCGCCCTGT TGGCCGCCGCCCACCGGGCGCTTCCCGACTCCGGCCTGCTGATCGTCGCCGAGCCGATGGCCGATACCCCGGGCGCCGAG CCGATGGGCGCGGCCTATTTCGGGTTTTATCTGCTGGCCATGGGCAGTGGACGGCCGCGGAGCCGGGCGACACTGACCGA AATGCTGCGCGAAGCCGGCTTTGCCGACGTACGGATGGCGAAAACCCGCAATCCGTTGCTGACTCAGGTTCTGGTTGCGC GCAAGGCGGCGCCCGCGTCGCTTGCGGCGGTCGGCGCCAAGGTCCCCCAGGCTGCGGGCGACTGTAAGTAA
Upstream 100 bases:
>100_bases GGAGCCGCAAGGGGAACCACCAAGGATCGCAACACGCAAGTTGAGTGCCGCTTGGCGCTGGACCGATGGAGCATGGCGCC CTGGGGCGCCGGAACACGCC
Downstream 100 bases:
>100_bases AGATTGACATTCACGGCAGTCAGGCTAACCTGACAGCAGTTGTTTCGGCTCGAACCACGAGACGCCTTTATGGACACCCT CGCCGTCGTCATCCAAGAAC
Product: hydroxyneurosporene-O-methyltransferase
Products: NA
Alternate protein names: O-methylase [H]
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MKTLSSHAVSDALTGWRDRLLTNDRFQYWAMRLPGLRTIARRRARSLFDLCAGFVYSQVLDACVRLDLLPVLAEGPQTAT VVAERIALPVEGARRLLEAAVSLDLVERRRGGRFGLGALGAAMLGNPAVLAMVRHHGLFYQDMRDPVALLRGEAGETALS RYWAYARSQAPDELAEPAVSDYSALMSASQALVADEILDAVPLGNARCLMDIGGGEGGFMAAVLGRYPKIRGIVFDLQSV ADRAADRLDAAGFEPRVRVAGGDFRVDPLPTESDVMTLVRVVHDHDDDTVRALLAAAHRALPDSGLLIVAEPMADTPGAE PMGAAYFGFYLLAMGSGRPRSRATLTEMLREAGFADVRMAKTRNPLLTQVLVARKAAPASLAAVGAKVPQAAGDCK
Sequences:
>Translated_396_residues MKTLSSHAVSDALTGWRDRLLTNDRFQYWAMRLPGLRTIARRRARSLFDLCAGFVYSQVLDACVRLDLLPVLAEGPQTAT VVAERIALPVEGARRLLEAAVSLDLVERRRGGRFGLGALGAAMLGNPAVLAMVRHHGLFYQDMRDPVALLRGEAGETALS RYWAYARSQAPDELAEPAVSDYSALMSASQALVADEILDAVPLGNARCLMDIGGGEGGFMAAVLGRYPKIRGIVFDLQSV ADRAADRLDAAGFEPRVRVAGGDFRVDPLPTESDVMTLVRVVHDHDDDTVRALLAAAHRALPDSGLLIVAEPMADTPGAE PMGAAYFGFYLLAMGSGRPRSRATLTEMLREAGFADVRMAKTRNPLLTQVLVARKAAPASLAAVGAKVPQAAGDCK >Mature_396_residues MKTLSSHAVSDALTGWRDRLLTNDRFQYWAMRLPGLRTIARRRARSLFDLCAGFVYSQVLDACVRLDLLPVLAEGPQTAT VVAERIALPVEGARRLLEAAVSLDLVERRRGGRFGLGALGAAMLGNPAVLAMVRHHGLFYQDMRDPVALLRGEAGETALS RYWAYARSQAPDELAEPAVSDYSALMSASQALVADEILDAVPLGNARCLMDIGGGEGGFMAAVLGRYPKIRGIVFDLQSV ADRAADRLDAAGFEPRVRVAGGDFRVDPLPTESDVMTLVRVVHDHDDDTVRALLAAAHRALPDSGLLIVAEPMADTPGAE PMGAAYFGFYLLAMGSGRPRSRATLTEMLREAGFADVRMAKTRNPLLTQVLVARKAAPASLAAVGAKVPQAAGDCK
Specific function: Converts hydroxyneurosporene to methoxyneurosporene or demethylspheroidene to spheroidene [H]
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI291045181, Length=350, Percent_Identity=25.4285714285714, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI291045183, Length=350, Percent_Identity=25.4285714285714, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI117553627, Length=350, Percent_Identity=25.4285714285714, Blast_Score=77, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016461 - InterPro: IPR001077 - InterPro: IPR011991 [H]
Pfam domain/function: PF00891 Methyltransf_2 [H]
EC number: NA
Molecular weight: Translated: 42447; Mature: 42447
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLSSHAVSDALTGWRDRLLTNDRFQYWAMRLPGLRTIARRRARSLFDLCAGFVYSQVL CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH DACVRLDLLPVLAEGPQTATVVAERIALPVEGARRLLEAAVSLDLVERRRGGRFGLGALG HHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH AAMLGNPAVLAMVRHHGLFYQDMRDPVALLRGEAGETALSRYWAYARSQAPDELAEPAVS HHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHCCHHH DYSALMSASQALVADEILDAVPLGNARCLMDIGGGEGGFMAAVLGRYPKIRGIVFDLQSV HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHH ADRAADRLDAAGFEPRVRVAGGDFRVDPLPTESDVMTLVRVVHDHDDDTVRALLAAAHRA HHHHHHHHHCCCCCCEEEEECCCEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LPDSGLLIVAEPMADTPGAEPMGAAYFGFYLLAMGSGRPRSRATLTEMLREAGFADVRMA CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHH KTRNPLLTQVLVARKAAPASLAAVGAKVPQAAGDCK HCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKTLSSHAVSDALTGWRDRLLTNDRFQYWAMRLPGLRTIARRRARSLFDLCAGFVYSQVL CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH DACVRLDLLPVLAEGPQTATVVAERIALPVEGARRLLEAAVSLDLVERRRGGRFGLGALG HHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH AAMLGNPAVLAMVRHHGLFYQDMRDPVALLRGEAGETALSRYWAYARSQAPDELAEPAVS HHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHCCHHH DYSALMSASQALVADEILDAVPLGNARCLMDIGGGEGGFMAAVLGRYPKIRGIVFDLQSV HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHH ADRAADRLDAAGFEPRVRVAGGDFRVDPLPTESDVMTLVRVVHDHDDDTVRALLAAAHRA HHHHHHHHHCCCCCCEEEEECCCEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LPDSGLLIVAEPMADTPGAEPMGAAYFGFYLLAMGSGRPRSRATLTEMLREAGFADVRMA CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHH KTRNPLLTQVLVARKAAPASLAAVGAKVPQAAGDCK HCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7721699; 10648776 [H]