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The map label for this gene is yhdH [H]

Identifier: 83594292

GI number: 83594292

Start: 3412212

End: 3413195

Strand: Direct

Name: yhdH [H]

Synonym: Rru_A2962

Alternate gene names: 83594292

Gene position: 3412212-3413195 (Clockwise)

Preceding gene: 83594291

Following gene: 83594294

Centisome position: 78.39

GC content: 69.92

Gene sequence:

>984_bases
ATGATCAAAGCCGTGCTGATCGAAAAGACCGAGGCGGGCCACCATGCCGCGCTGACCGAACTGGCCGACGACGCCCTGCC
CGAAGGCGATGTCACCGTGGCGGTGTCTTATTCGACGCTGAACTACAAGGACGCCCTGGCGATCACCGGCAAGGGTCCGG
TGGTCCGCCAGTTCCCGATGGTGCCGGGCATCGATTTCGCCGGTTTCGTCGAAACCAGCCGCCATCCGGACTTCAAGGCC
GGCGACAGCGTGGTGCTCAACGGCTGGGGGGTTGGGGAAAGCCATTGGGGCGGGCTGGCGCAAAAGGCCCGGGTGAACGG
CGATTGGCTGATCCCGCTGCAGGCCCCCTTCACCGCCGCCCAGGCCATGGCCATCGGCACGGCGGGTTATACCGCCATGC
TTTGCGTGCTCGCCCTGGAACGCCAGGGCGTCACCGCCGATCAGGGCGAGATCCTGGTTACCGGCGCGGCCGGCGGCGTC
GGTAGCGTCGCCGTGGCGGTGCTGGCCAAGCTGGGCTACCGGGTTGTCGCCTCGACCGGGCGGGCCGCCGAAGCCCCCTA
TCTGCGTTCGCTGGGCGCGAGCGAGATCATCGACCGCGCGACGCTGTCGGCCCCGGGCAAGCCCTTGGCGCGCGAACGCT
GGGCCGGCGCCATCGACACCGTGGGAAGTCATACCCTGGCCAATGTCTGCGCCGCCCTGCGCTATGGCGCCACGGTGGCC
GCCTGCGGGCTGGCCCAGGGCATGGATCTGCCGCTGACCGTCGCCCCCTTCATCCTGCGCGGCGTCACCCTGGCCGGCGT
CGACAGCGTTTACCGGCCGATCGCCCAGCGCCGGGAAGCCTGGGCCCGCCTCGCCCGCGACCTCGATATCGATAAGCTCG
CAGCGATCACCGGCACCATCCCTTTGTCCGAGGTGGTGCCGGCGGCGAGCCGCATGCTGGCCGGTCAGGTGCGCGGCCGG
CTGGTCGTCGACGTCAACGCCTAG

Upstream 100 bases:

>100_bases
CCCCACCCCTTAGATCAAAAATTCCGCCAAAAAAGCCGGGCGTTTTGTACAGTTTGGTCTAATCACGTTCGTCGTATCCC
CCATGCGCAAGGACAGACCG

Downstream 100 bases:

>100_bases
GCTCTTGAGAGGGCAGCAAATCGTCGTCGCACTCTGGTTCAGAGTGCGCGGGACTTGCTAACCCGTCACCAGCTTAGGGA
CCGCCTCAGCCCCTCGACGG

Product: zinc-containing alcohol dehydrogenase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MIKAVLIEKTEAGHHAALTELADDALPEGDVTVAVSYSTLNYKDALAITGKGPVVRQFPMVPGIDFAGFVETSRHPDFKA
GDSVVLNGWGVGESHWGGLAQKARVNGDWLIPLQAPFTAAQAMAIGTAGYTAMLCVLALERQGVTADQGEILVTGAAGGV
GSVAVAVLAKLGYRVVASTGRAAEAPYLRSLGASEIIDRATLSAPGKPLARERWAGAIDTVGSHTLANVCAALRYGATVA
ACGLAQGMDLPLTVAPFILRGVTLAGVDSVYRPIAQRREAWARLARDLDIDKLAAITGTIPLSEVVPAASRMLAGQVRGR
LVVDVNA

Sequences:

>Translated_327_residues
MIKAVLIEKTEAGHHAALTELADDALPEGDVTVAVSYSTLNYKDALAITGKGPVVRQFPMVPGIDFAGFVETSRHPDFKA
GDSVVLNGWGVGESHWGGLAQKARVNGDWLIPLQAPFTAAQAMAIGTAGYTAMLCVLALERQGVTADQGEILVTGAAGGV
GSVAVAVLAKLGYRVVASTGRAAEAPYLRSLGASEIIDRATLSAPGKPLARERWAGAIDTVGSHTLANVCAALRYGATVA
ACGLAQGMDLPLTVAPFILRGVTLAGVDSVYRPIAQRREAWARLARDLDIDKLAAITGTIPLSEVVPAASRMLAGQVRGR
LVVDVNA
>Mature_327_residues
MIKAVLIEKTEAGHHAALTELADDALPEGDVTVAVSYSTLNYKDALAITGKGPVVRQFPMVPGIDFAGFVETSRHPDFKA
GDSVVLNGWGVGESHWGGLAQKARVNGDWLIPLQAPFTAAQAMAIGTAGYTAMLCVLALERQGVTADQGEILVTGAAGGV
GSVAVAVLAKLGYRVVASTGRAAEAPYLRSLGASEIIDRATLSAPGKPLARERWAGAIDTVGSHTLANVCAALRYGATVA
ACGLAQGMDLPLTVAPFILRGVTLAGVDSVYRPIAQRREAWARLARDLDIDKLAAITGTIPLSEVVPAASRMLAGQVRGR
LVVDVNA

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789651, Length=325, Percent_Identity=55.3846153846154, Blast_Score=347, Evalue=4e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040
- InterPro:   IPR014188 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 33870; Mature: 33870

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKAVLIEKTEAGHHAALTELADDALPEGDVTVAVSYSTLNYKDALAITGKGPVVRQFPM
CCEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEECCCCEEEEECCCCCEEECCC
VPGIDFAGFVETSRHPDFKAGDSVVLNGWGVGESHWGGLAQKARVNGDWLIPLQAPFTAA
CCCCCHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHCCCHHHEECCCCEEEEECCCCHHH
QAMAIGTAGYTAMLCVLALERQGVTADQGEILVTGAAGGVGSVAVAVLAKLGYRVVASTG
HHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEECCC
RAAEAPYLRSLGASEIIDRATLSAPGKPLARERWAGAIDTVGSHTLANVCAALRYGATVA
CCCCCCHHHHCCHHHHHHHHHCCCCCCCHHHHHHCCHHHHCCHHHHHHHHHHHHHCCHHH
ACGLAQGMDLPLTVAPFILRGVTLAGVDSVYRPIAQRREAWARLARDLDIDKLAAITGTI
HHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
PLSEVVPAASRMLAGQVRGRLVVDVNA
CHHHHHHHHHHHHHHHHCCEEEEEECC
>Mature Secondary Structure
MIKAVLIEKTEAGHHAALTELADDALPEGDVTVAVSYSTLNYKDALAITGKGPVVRQFPM
CCEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEECCCCEEEEECCCCCEEECCC
VPGIDFAGFVETSRHPDFKAGDSVVLNGWGVGESHWGGLAQKARVNGDWLIPLQAPFTAA
CCCCCHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHCCCHHHEECCCCEEEEECCCCHHH
QAMAIGTAGYTAMLCVLALERQGVTADQGEILVTGAAGGVGSVAVAVLAKLGYRVVASTG
HHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEECCC
RAAEAPYLRSLGASEIIDRATLSAPGKPLARERWAGAIDTVGSHTLANVCAALRYGATVA
CCCCCCHHHHCCHHHHHHHHHCCCCCCCHHHHHHCCHHHHCCHHHHHHHHHHHHHCCHHH
ACGLAQGMDLPLTVAPFILRGVTLAGVDSVYRPIAQRREAWARLARDLDIDKLAAITGTI
HHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
PLSEVVPAASRMLAGQVRGRLVVDVNA
CHHHHHHHHHHHHHHHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1370469; 9278503 [H]