| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594291
Identifier: 83594291
GI number: 83594291
Start: 3411327
End: 3412124
Strand: Direct
Name: 83594291
Synonym: Rru_A2961
Alternate gene names: NA
Gene position: 3411327-3412124 (Clockwise)
Preceding gene: 83594290
Following gene: 83594292
Centisome position: 78.37
GC content: 69.67
Gene sequence:
>798_bases GTGATCGCCGAATGGCTCACCAGCGTCCTGACGCCCGCCTCTTTTGAGGCGCGGCGTTTGGGCGTGGTGGCCGAGGTGGT GGCGGTGCGCGCCCGGGCCCGCCGTCAGGCCAAGGCCTGGGCCCCCCATCTTGCCGCCTGTCACCAAACCATCCTTACCG CCTGCCAAACCGTCGCCAACCCCGGCAGCGTCGCCGTGCTCGGGGCGGGTTGGTTGCTGGACGTGCCCTTCGACGCCCTG ACCCGCCGCTTCGACCAAGTGCTGCTGATCGATGCCGTGGTTCCGCGCGCCGTGCGCGCCCGGGCTGGTCATGCCGGCGC CCTCTGGCAAGCCCACGACCTGGGCGGCGTGCTGGCGACCTTAGCGGCGCAAAAGGGCGGAGCGCGCGGGCAAGCGCCCG ATGTTCCAAGGCCGGCCCCCTTTCCCGAAGCCGTTCTTGCGGCCGATCTGGTGATCTCGGCCAATCTGCTCAGTCAATTG GCCATGGCGCCTAGGCTTTGGCTTGATCGCCACGGCGCCGATCTTGATACCCAAGACCGCCTGTCGCGCGCCCTGATCGA GGCCCATCTCGAAGCCCTTGGCCGCTGCCGGGGCCGGGTTTGCCTGATCAGCGATTTCGAACGCGAGGAACGCGGCGCCC CCGGCGGCCCCCAGCGCTTCGATCTGCTGTTTGGCGCCCGCCCGCGCATCGATGGCCAAAGATGGCTGTGGGACCTCGCC CCGCGCGGCGAAGCCGAAAACGGCCTTTCGGTGCGCCACAAGGTGATGGGCGGCCTGCTGGCAAGCCCCACCCCTTAG
Upstream 100 bases:
>100_bases TACCGGGTGCCGATCGCCCGACTGGCCGCCGCCCAGGCCGCCCTGCGCAGCGCCGTCAAACAGCCCGCGCCGGTTTAAGC CAGACCTCTGGCGACCAACC
Downstream 100 bases:
>100_bases ATCAAAAATTCCGCCAAAAAAGCCGGGCGTTTTGTACAGTTTGGTCTAATCACGTTCGTCGTATCCCCCATGCGCAAGGA CAGACCGATGATCAAAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MIAEWLTSVLTPASFEARRLGVVAEVVAVRARARRQAKAWAPHLAACHQTILTACQTVANPGSVAVLGAGWLLDVPFDAL TRRFDQVLLIDAVVPRAVRARAGHAGALWQAHDLGGVLATLAAQKGGARGQAPDVPRPAPFPEAVLAADLVISANLLSQL AMAPRLWLDRHGADLDTQDRLSRALIEAHLEALGRCRGRVCLISDFEREERGAPGGPQRFDLLFGARPRIDGQRWLWDLA PRGEAENGLSVRHKVMGGLLASPTP
Sequences:
>Translated_265_residues MIAEWLTSVLTPASFEARRLGVVAEVVAVRARARRQAKAWAPHLAACHQTILTACQTVANPGSVAVLGAGWLLDVPFDAL TRRFDQVLLIDAVVPRAVRARAGHAGALWQAHDLGGVLATLAAQKGGARGQAPDVPRPAPFPEAVLAADLVISANLLSQL AMAPRLWLDRHGADLDTQDRLSRALIEAHLEALGRCRGRVCLISDFEREERGAPGGPQRFDLLFGARPRIDGQRWLWDLA PRGEAENGLSVRHKVMGGLLASPTP >Mature_265_residues MIAEWLTSVLTPASFEARRLGVVAEVVAVRARARRQAKAWAPHLAACHQTILTACQTVANPGSVAVLGAGWLLDVPFDAL TRRFDQVLLIDAVVPRAVRARAGHAGALWQAHDLGGVLATLAAQKGGARGQAPDVPRPAPFPEAVLAADLVISANLLSQL AMAPRLWLDRHGADLDTQDRLSRALIEAHLEALGRCRGRVCLISDFEREERGAPGGPQRFDLLFGARPRIDGQRWLWDLA PRGEAENGLSVRHKVMGGLLASPTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28464; Mature: 28464
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAEWLTSVLTPASFEARRLGVVAEVVAVRARARRQAKAWAPHLAACHQTILTACQTVAN CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC PGSVAVLGAGWLLDVPFDALTRRFDQVLLIDAVVPRAVRARAGHAGALWQAHDLGGVLAT CCCEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LAAQKGGARGQAPDVPRPAPFPEAVLAADLVISANLLSQLAMAPRLWLDRHGADLDTQDR HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH LSRALIEAHLEALGRCRGRVCLISDFEREERGAPGGPQRFDLLFGARPRIDGQRWLWDLA HHHHHHHHHHHHHHHHCCCEEEEECCHHHHCCCCCCCCHHHHEECCCCCCCCHHHEEECC PRGEAENGLSVRHKVMGGLLASPTP CCCCCCCCHHHHHHHHHCHHCCCCC >Mature Secondary Structure MIAEWLTSVLTPASFEARRLGVVAEVVAVRARARRQAKAWAPHLAACHQTILTACQTVAN CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC PGSVAVLGAGWLLDVPFDALTRRFDQVLLIDAVVPRAVRARAGHAGALWQAHDLGGVLAT CCCEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LAAQKGGARGQAPDVPRPAPFPEAVLAADLVISANLLSQLAMAPRLWLDRHGADLDTQDR HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH LSRALIEAHLEALGRCRGRVCLISDFEREERGAPGGPQRFDLLFGARPRIDGQRWLWDLA HHHHHHHHHHHHHHHHCCCEEEEECCHHHHCCCCCCCCHHHHEECCCCCCCCHHHEEECC PRGEAENGLSVRHKVMGGLLASPTP CCCCCCCCHHHHHHHHHCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA