| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594277
Identifier: 83594277
GI number: 83594277
Start: 3394360
End: 3394854
Strand: Reverse
Name: 83594277
Synonym: Rru_A2945
Alternate gene names: NA
Gene position: 3394854-3394360 (Counterclockwise)
Preceding gene: 83594278
Following gene: 83594276
Centisome position: 77.99
GC content: 64.04
Gene sequence:
>495_bases ATGGGCCGCTCGTCACTCGTCGTGTCCGCTGTCTTTGCCGGGGGCTCGCTGCTGGGCGCCCTTTGCGGGATGGGACCCGC CTTCGCCGAACCACCGACCGCCGATGAGTTCCGCACCCTTGATACGGTGCCCGATCGCATGGCCGCCTGTTCGGATGCCG GGGCCGATGCCTATGAATCGGGGGATGCCGAACAGATCCGCAAGGCGATGGACGGCGAGATCGCCTGTCTAACGGTGATC GCCGCCGATCTGGGGAAAACCTTTTATGGGGCCGAGGCCTTCGGCGCCGATGGCATCGAAGGCGCGCTCAAGCGGCTGAG GGATCCCTTGGGCCGGCTTTACGCCACGGTGCAGAACGATCCGGTCGCCTGCGCCCCGGCCTGCGGCACGCTCTACACCA TCCAAAGCGAAGACATGTATCGCCGTTTTCTCGCCACGCTCATCCTTGATATCAGTGAACGGCTGAAGGATGACAGCCCG GTTCATTCGGAGTAG
Upstream 100 bases:
>100_bases GTTCGGCCGGCGCTGAGGCGGCGGAGGACGGCGGTTCTGGAACCGGGGAGGGGCCGCGCTTTTGGGGCGTGGTCTAAGGG GAATGGGATTTCGCGAAAAA
Downstream 100 bases:
>100_bases CGGCTTGGCGAGCACGCCCCTTCGTCAGCGGGAGGCCACCTCGTGTCGGCGTCTCTGACCCCCGGCCGCGCCGCCGCGCC GGCCGAGGCCGCCGATCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MGRSSLVVSAVFAGGSLLGALCGMGPAFAEPPTADEFRTLDTVPDRMAACSDAGADAYESGDAEQIRKAMDGEIACLTVI AADLGKTFYGAEAFGADGIEGALKRLRDPLGRLYATVQNDPVACAPACGTLYTIQSEDMYRRFLATLILDISERLKDDSP VHSE
Sequences:
>Translated_164_residues MGRSSLVVSAVFAGGSLLGALCGMGPAFAEPPTADEFRTLDTVPDRMAACSDAGADAYESGDAEQIRKAMDGEIACLTVI AADLGKTFYGAEAFGADGIEGALKRLRDPLGRLYATVQNDPVACAPACGTLYTIQSEDMYRRFLATLILDISERLKDDSP VHSE >Mature_163_residues GRSSLVVSAVFAGGSLLGALCGMGPAFAEPPTADEFRTLDTVPDRMAACSDAGADAYESGDAEQIRKAMDGEIACLTVIA ADLGKTFYGAEAFGADGIEGALKRLRDPLGRLYATVQNDPVACAPACGTLYTIQSEDMYRRFLATLILDISERLKDDSPV HSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17260; Mature: 17128
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRSSLVVSAVFAGGSLLGALCGMGPAFAEPPTADEFRTLDTVPDRMAACSDAGADAYES CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCC GDAEQIRKAMDGEIACLTVIAADLGKTFYGAEAFGADGIEGALKRLRDPLGRLYATVQND CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCC PVACAPACGTLYTIQSEDMYRRFLATLILDISERLKDDSPVHSE CCEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure GRSSLVVSAVFAGGSLLGALCGMGPAFAEPPTADEFRTLDTVPDRMAACSDAGADAYES CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCC GDAEQIRKAMDGEIACLTVIAADLGKTFYGAEAFGADGIEGALKRLRDPLGRLYATVQND CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCC PVACAPACGTLYTIQSEDMYRRFLATLILDISERLKDDSPVHSE CCEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA