| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is luxQ [H]
Identifier: 83594267
GI number: 83594267
Start: 3380587
End: 3383040
Strand: Reverse
Name: luxQ [H]
Synonym: Rru_A2935
Alternate gene names: 83594267
Gene position: 3383040-3380587 (Counterclockwise)
Preceding gene: 83594268
Following gene: 83594266
Centisome position: 77.72
GC content: 67.77
Gene sequence:
>2454_bases ATGATCAATGGACTGGCGGACTCGACGGGGTGGATCGCAGGCGGCGTCGGGGATGGCGCCCAGATAGCCCTGTGGGTTCT GGGAGGCGGCTTCCTGGCCGGGGCCTGGGCGTGGTCCCTGCGCCTGGCCTGCCGCAGGGGCGAGCGTTTGGCCCGGGCCC GCGGGCCGCATCTGCTTGATAACCTCGATGAAGCGGTGGTGGTGACCGGGGGCGATGGGCGGGTGGCCTATCGGAACCGG GCGGCGGCAAGGCTGCTTGCCCACCTCGCGCCGACCGCCGGCAGCGAACCCTCGCTGGATGGCTTTTGGGAAAAGGCCCT GCCTTTGCGCCCGGCGCGGACCACCGACGGGCTGGTCGTCGAGCGGCGGTTGATCGAAGGAGGCAGCCTTGACCAGGGGG TCTGTCTTCTGGCGATTCGCCAAAGCCTGCCGCCGGGCGCTTTCACCCTCGACCCGGCCGAGGCGGGGAACGCCGCCGGC CTGTCGGGGCTGACCCTATGGACCTTGCTTGATGTGTCGCATTGGCGGCGGCTTGACCAGACGGTTACCGAGCGCGAGGC CCGGCTGAGCGCCGTGCTCAATGCCATCGACGAATCGATCATGCGCATCGAGCCCGATGGCCGTATCGGCTTTATCAATA CCGCCGGAACCGTGATCCTCGGGGTGGCGCGCGATCAGGTGATCGGTCAGCCGCTGGCCGCCTTCTCGCCACCGGCGGTG GCCTGGGTCCGCCAGACCCGGGTGCGCGAGGTGATCGATGGCGGCAAGGCGGTGCGCTTCGTCGATCGCAGCGGCGATCG GTGGCGCGAGCACACCTTTTCCCCAATCCCGGATGGCGAGGGGCGAACCGTGGCCATCGCCGCCTGTTCGCGCGATGTCA CCGCCGAAAAGCGGGTTCATCAGGAGTTATGCCGACGCGAGCAGTTCATTCGGCTGATCACCGACAACCTGCCCGGCGTC GTCTTCTATGTCGATGAGGCCGACACCTTCAAATTCGTCAATCGCCGGGTGACCGACTGGCTGGGCAAGCCGCCGACCGA TCTGCTGGGACGGCCCTTCCGCGAGGGCGTCGATCCGCTGCTCAATGAGGCCACCCTGGCCGGCCGCAAGGCGGCGCTGG CCGGGGAGCGGGTCGACTTCGATTCCGAGTTCGTCGATCCCGATGGTCACACGCGGCGCTTCCAGGCGACTTTCATCCCC CACCTCGAAGGCGGCGAGGTTCTGGGGTATGTCGGGCTGCTTCTTGACACCACCAAGCGGGTCGAAGTGGAAGCCGCCGT GCGCGACGCCCTGGCCCGGGCCGAGGCGGCCAGCACCTCGAAATCCCGCTTTCTGGCCGCGGCCAGCCACGATCTGCGCC AACCGATGCAGGCGCTCAACATCTATGTCGGTCTGCTGACCCGTCAGGTCCGCGAGCAGCCCCGCGCCTATGAACTGGTG CAACGGGTGGGGCAATCGGTCAATGCCCTGGGCGACCTGCTCGATTCGCTGCTCGATGTGTCCAAGCTCGATGCCGGCAT CGTCACCGCCGCCCCCCAGCCCTTCGCCGTGAACAATATCCTTGAGCGCATGGATACGGAGATGCGGCCGCTGTTCGAGG CCAAGGGCCTGCGTTTCCGGGTCGTCAAAAGCGCGCTGATGGCCTGTAGCGATGATACGCTGGTGGAACGGATCTTGCGC AATCTTGTTACCAACGCCTACCGCTATACCCAGAGCGGCGGCGTGGTTCTGGGATGCCGGCGACGGGGCGGGACCGTGGT TTTCCAGGTCTGGGACAGCGGCATCGGCATTCCCGCCGACCGTCTGGATCTGATTTTTGAAGAATTCTATCAGGTGGGCA ATCAGGGGCGCGACCGGGCCCAGGGGCTGGGCCTGGGGCTGGCCATCGTCCGCAGGCTGTCGCAGTTGCTTGGTCATCCC GTCGCGGTGCGCTCCGAGGTTGGCCGGGGAACGATGTTCGAGGTGGCTTTGCCCCAGGCCTCGCCCGAAGAGATGGAAGC GGCCGTGACCTCGTGGACGGCCACCGGCCTGCCGGCCATCCGCGATGGCACCCTGGCGGTGGTGATCGACGATGACAGCG CCGTGCTCGACGGCATGGCCCTGCTGCTCGAGGACTGGGGCTTCGACGTGGTGGCCGCCCAGGACATGCTGGAAGCCTTC GAGGCCTTGCGCGGGTCGCCAAAGGCGCCGGCGGTGATCATCGCCGACTATCGCCTTCAGGCCGGGGGGACCGGCGTGGC GGCGGTGCAAAGCCTGCGTCAGGCCTTTGGCGTGACCATCCCCGGGGTGATCGTCACCGGCGATACCTCGCCCGAGCGCC TGCGCGAGGTCACGGCCAGCGGCTTTCGTTTGCTGCACAAGCCGGTGCGCACCTTCGACCTGCGCGCCGCCCTGGCCGAG GAAATGGGCGAGGACGCCCTGGAAGGGATTCCGCCCCAGCGCCGGGGCGCCTGA
Upstream 100 bases:
>100_bases CGCCCCTGACGAAGGAGTCCGCCGTTCTTCGGTAAGCGGGCTGTGACAGCGGGGCGGAAGGCGATAAGCTGACCCGCTTG GTTATGGCAAAGGGATCCGC
Downstream 100 bases:
>100_bases GTCGCGCCCCGCTTTTGTCAGAGCCCCCCTTTTGTCAGAGCCCCCCTTTTGTCAGAGAAGGACTGCGCGATGCCCGAGAC GCCGGCCTGCGGGGGAGAGT
Product: PAS/PAC sensor hybrid histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 817; Mature: 817
Protein sequence:
>817_residues MINGLADSTGWIAGGVGDGAQIALWVLGGGFLAGAWAWSLRLACRRGERLARARGPHLLDNLDEAVVVTGGDGRVAYRNR AAARLLAHLAPTAGSEPSLDGFWEKALPLRPARTTDGLVVERRLIEGGSLDQGVCLLAIRQSLPPGAFTLDPAEAGNAAG LSGLTLWTLLDVSHWRRLDQTVTEREARLSAVLNAIDESIMRIEPDGRIGFINTAGTVILGVARDQVIGQPLAAFSPPAV AWVRQTRVREVIDGGKAVRFVDRSGDRWREHTFSPIPDGEGRTVAIAACSRDVTAEKRVHQELCRREQFIRLITDNLPGV VFYVDEADTFKFVNRRVTDWLGKPPTDLLGRPFREGVDPLLNEATLAGRKAALAGERVDFDSEFVDPDGHTRRFQATFIP HLEGGEVLGYVGLLLDTTKRVEVEAAVRDALARAEAASTSKSRFLAAASHDLRQPMQALNIYVGLLTRQVREQPRAYELV QRVGQSVNALGDLLDSLLDVSKLDAGIVTAAPQPFAVNNILERMDTEMRPLFEAKGLRFRVVKSALMACSDDTLVERILR NLVTNAYRYTQSGGVVLGCRRRGGTVVFQVWDSGIGIPADRLDLIFEEFYQVGNQGRDRAQGLGLGLAIVRRLSQLLGHP VAVRSEVGRGTMFEVALPQASPEEMEAAVTSWTATGLPAIRDGTLAVVIDDDSAVLDGMALLLEDWGFDVVAAQDMLEAF EALRGSPKAPAVIIADYRLQAGGTGVAAVQSLRQAFGVTIPGVIVTGDTSPERLREVTASGFRLLHKPVRTFDLRAALAE EMGEDALEGIPPQRRGA
Sequences:
>Translated_817_residues MINGLADSTGWIAGGVGDGAQIALWVLGGGFLAGAWAWSLRLACRRGERLARARGPHLLDNLDEAVVVTGGDGRVAYRNR AAARLLAHLAPTAGSEPSLDGFWEKALPLRPARTTDGLVVERRLIEGGSLDQGVCLLAIRQSLPPGAFTLDPAEAGNAAG LSGLTLWTLLDVSHWRRLDQTVTEREARLSAVLNAIDESIMRIEPDGRIGFINTAGTVILGVARDQVIGQPLAAFSPPAV AWVRQTRVREVIDGGKAVRFVDRSGDRWREHTFSPIPDGEGRTVAIAACSRDVTAEKRVHQELCRREQFIRLITDNLPGV VFYVDEADTFKFVNRRVTDWLGKPPTDLLGRPFREGVDPLLNEATLAGRKAALAGERVDFDSEFVDPDGHTRRFQATFIP HLEGGEVLGYVGLLLDTTKRVEVEAAVRDALARAEAASTSKSRFLAAASHDLRQPMQALNIYVGLLTRQVREQPRAYELV QRVGQSVNALGDLLDSLLDVSKLDAGIVTAAPQPFAVNNILERMDTEMRPLFEAKGLRFRVVKSALMACSDDTLVERILR NLVTNAYRYTQSGGVVLGCRRRGGTVVFQVWDSGIGIPADRLDLIFEEFYQVGNQGRDRAQGLGLGLAIVRRLSQLLGHP VAVRSEVGRGTMFEVALPQASPEEMEAAVTSWTATGLPAIRDGTLAVVIDDDSAVLDGMALLLEDWGFDVVAAQDMLEAF EALRGSPKAPAVIIADYRLQAGGTGVAAVQSLRQAFGVTIPGVIVTGDTSPERLREVTASGFRLLHKPVRTFDLRAALAE EMGEDALEGIPPQRRGA >Mature_817_residues MINGLADSTGWIAGGVGDGAQIALWVLGGGFLAGAWAWSLRLACRRGERLARARGPHLLDNLDEAVVVTGGDGRVAYRNR AAARLLAHLAPTAGSEPSLDGFWEKALPLRPARTTDGLVVERRLIEGGSLDQGVCLLAIRQSLPPGAFTLDPAEAGNAAG LSGLTLWTLLDVSHWRRLDQTVTEREARLSAVLNAIDESIMRIEPDGRIGFINTAGTVILGVARDQVIGQPLAAFSPPAV AWVRQTRVREVIDGGKAVRFVDRSGDRWREHTFSPIPDGEGRTVAIAACSRDVTAEKRVHQELCRREQFIRLITDNLPGV VFYVDEADTFKFVNRRVTDWLGKPPTDLLGRPFREGVDPLLNEATLAGRKAALAGERVDFDSEFVDPDGHTRRFQATFIP HLEGGEVLGYVGLLLDTTKRVEVEAAVRDALARAEAASTSKSRFLAAASHDLRQPMQALNIYVGLLTRQVREQPRAYELV QRVGQSVNALGDLLDSLLDVSKLDAGIVTAAPQPFAVNNILERMDTEMRPLFEAKGLRFRVVKSALMACSDDTLVERILR NLVTNAYRYTQSGGVVLGCRRRGGTVVFQVWDSGIGIPADRLDLIFEEFYQVGNQGRDRAQGLGLGLAIVRRLSQLLGHP VAVRSEVGRGTMFEVALPQASPEEMEAAVTSWTATGLPAIRDGTLAVVIDDDSAVLDGMALLLEDWGFDVVAAQDMLEAF EALRGSPKAPAVIIADYRLQAGGTGVAAVQSLRQAFGVTIPGVIVTGDTSPERLREVTASGFRLLHKPVRTFDLRAALAE EMGEDALEGIPPQRRGA
Specific function: At low cell density, in absence of autoinducer has a kinase activity, and autophosphorylates on a histidine residue. The phosphoryl group is then transferred to an aspartate residue in the response regulator domain. The phosphoryl group is transferred to
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=438, Percent_Identity=28.9954337899543, Blast_Score=138, Evalue=1e-33, Organism=Escherichia coli, GI145693157, Length=290, Percent_Identity=30, Blast_Score=134, Evalue=2e-32, Organism=Escherichia coli, GI87081816, Length=374, Percent_Identity=30.2139037433155, Blast_Score=109, Evalue=7e-25, Organism=Escherichia coli, GI1789149, Length=251, Percent_Identity=30.2788844621514, Blast_Score=99, Evalue=9e-22, Organism=Escherichia coli, GI1786783, Length=245, Percent_Identity=25.7142857142857, Blast_Score=80, Evalue=6e-16, Organism=Escherichia coli, GI1786600, Length=273, Percent_Identity=23.4432234432234, Blast_Score=76, Evalue=8e-15, Organism=Escherichia coli, GI87082128, Length=236, Percent_Identity=26.6949152542373, Blast_Score=76, Evalue=9e-15, Organism=Escherichia coli, GI1786912, Length=229, Percent_Identity=26.6375545851528, Blast_Score=76, Evalue=1e-14, Organism=Escherichia coli, GI1788393, Length=228, Percent_Identity=29.8245614035088, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1788713, Length=413, Percent_Identity=23.4866828087167, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1790436, Length=235, Percent_Identity=25.531914893617, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR015387 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 - ProDom: PD142495 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF09308 LuxQ-periplasm; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 88450; Mature: 88450
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINGLADSTGWIAGGVGDGAQIALWVLGGGFLAGAWAWSLRLACRRGERLARARGPHLLD CCCCCCCCCCEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH NLDEAVVVTGGDGRVAYRNRAAARLLAHLAPTAGSEPSLDGFWEKALPLRPARTTDGLVV CCCCEEEEECCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHH ERRLIEGGSLDQGVCLLAIRQSLPPGAFTLDPAEAGNAAGLSGLTLWTLLDVSHWRRLDQ HHHHHCCCCCCCCHHHHHHHHCCCCCCEEECHHCCCCCCCCCHHHHHHHHHHHHHHHHHH TVTEREARLSAVLNAIDESIMRIEPDGRIGFINTAGTVILGVARDQVIGQPLAAFSPPAV HHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCEEEEEEHHHHHHCCCHHHCCCHHH AWVRQTRVREVIDGGKAVRFVDRSGDRWREHTFSPIPDGEGRTVAIAACSRDVTAEKRVH HHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHH QELCRREQFIRLITDNLPGVVFYVDEADTFKFVNRRVTDWLGKPPTDLLGRPFREGVDPL HHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHH LNEATLAGRKAALAGERVDFDSEFVDPDGHTRRFQATFIPHLEGGEVLGYVGLLLDTTKR HHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCHH VEVEAAVRDALARAEAASTSKSRFLAAASHDLRQPMQALNIYVGLLTRQVREQPRAYELV HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH QRVGQSVNALGDLLDSLLDVSKLDAGIVTAAPQPFAVNNILERMDTEMRPLFEAKGLRFR HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCHHHHHHHHHCCCHHH VVKSALMACSDDTLVERILRNLVTNAYRYTQSGGVVLGCRRRGGTVVFQVWDSGIGIPAD HHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCEEEEEEECCCCCCCHH RLDLIFEEFYQVGNQGRDRAQGLGLGLAIVRRLSQLLGHPVAVRSEVGRGTMFEVALPQA HHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHCCCEEEHHHCCCCCEEEEECCCC SPEEMEAAVTSWTATGLPAIRDGTLAVVIDDDSAVLDGMALLLEDWGFDVVAAQDMLEAF CHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH EALRGSPKAPAVIIADYRLQAGGTGVAAVQSLRQAFGVTIPGVIVTGDTSPERLREVTAS HHHCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHH GFRLLHKPVRTFDLRAALAEEMGEDALEGIPPQRRGA HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCC >Mature Secondary Structure MINGLADSTGWIAGGVGDGAQIALWVLGGGFLAGAWAWSLRLACRRGERLARARGPHLLD CCCCCCCCCCEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH NLDEAVVVTGGDGRVAYRNRAAARLLAHLAPTAGSEPSLDGFWEKALPLRPARTTDGLVV CCCCEEEEECCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHH ERRLIEGGSLDQGVCLLAIRQSLPPGAFTLDPAEAGNAAGLSGLTLWTLLDVSHWRRLDQ HHHHHCCCCCCCCHHHHHHHHCCCCCCEEECHHCCCCCCCCCHHHHHHHHHHHHHHHHHH TVTEREARLSAVLNAIDESIMRIEPDGRIGFINTAGTVILGVARDQVIGQPLAAFSPPAV HHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCEEEEEEHHHHHHCCCHHHCCCHHH AWVRQTRVREVIDGGKAVRFVDRSGDRWREHTFSPIPDGEGRTVAIAACSRDVTAEKRVH HHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHH QELCRREQFIRLITDNLPGVVFYVDEADTFKFVNRRVTDWLGKPPTDLLGRPFREGVDPL HHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHH LNEATLAGRKAALAGERVDFDSEFVDPDGHTRRFQATFIPHLEGGEVLGYVGLLLDTTKR HHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCHH VEVEAAVRDALARAEAASTSKSRFLAAASHDLRQPMQALNIYVGLLTRQVREQPRAYELV HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH QRVGQSVNALGDLLDSLLDVSKLDAGIVTAAPQPFAVNNILERMDTEMRPLFEAKGLRFR HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCHHHHHHHHHCCCHHH VVKSALMACSDDTLVERILRNLVTNAYRYTQSGGVVLGCRRRGGTVVFQVWDSGIGIPAD HHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCEEEEEEECCCCCCCHH RLDLIFEEFYQVGNQGRDRAQGLGLGLAIVRRLSQLLGHPVAVRSEVGRGTMFEVALPQA HHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHCCCEEEHHHCCCCCEEEEECCCC SPEEMEAAVTSWTATGLPAIRDGTLAVVIDDDSAVLDGMALLLEDWGFDVVAAQDMLEAF CHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH EALRGSPKAPAVIIADYRLQAGGTGVAAVQSLRQAFGVTIPGVIVTGDTSPERLREVTAS HHHCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHH GFRLLHKPVRTFDLRAALAEEMGEDALEGIPPQRRGA HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]