| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594221
Identifier: 83594221
GI number: 83594221
Start: 3333467
End: 3333988
Strand: Direct
Name: 83594221
Synonym: Rru_A2889
Alternate gene names: NA
Gene position: 3333467-3333988 (Clockwise)
Preceding gene: 83594220
Following gene: 83594222
Centisome position: 76.58
GC content: 59.39
Gene sequence:
>522_bases ATGGTGATCTTCGACGCCAATTTTCTGCTGCTTCTCCTTGATCCCGATGTGGACGTTCCAAAAGACCCGGCGACAGGGCG GCCGCTGACCCGCGCCAAGGACCGTGTCGAAGCCTTGATCGCAACGTTATCCAAACAGCGGGAGGCCATCGGTATCCCGA CCCCGGTCATCGCCGAAATATTGGTTCATGCGGGGTCCGCCGGCCCCCGCTATCTCAGCGTTATCAACAATACCAGCCGC TTCCGGATCTTGCCTTTCGATCTCCGTAGCGCCGTCGAGCTTGCGGCAATGACAGCATCCGCCATCGCCGCCGGCGATAA ACGATCCGGTAGCCTCGCGCCCTGGCAGAAGGTAAAGGTCGATCGGCAAATAGCCGCCATCGCGATCGTGGGCAATGCGT CCTCTATCTATACTGACGATGAGGGTGTCGTGACGCTCGCCAAGGCGGCAAAGATTCCGACGATCAGTAGTTGGGACCTG CCCCTGCCTCCCGAAGACACCCAGCGAACACTCGACATTTAG
Upstream 100 bases:
>100_bases TGGTGGCGCGCTTACGCGACATTGACGGGAACGGTTGGCGGGATGTCACTCGTCCCTTAAAGGTCTTACGTGACATCCGT GGTGAGGAGATCACGCCTTA
Downstream 100 bases:
>100_bases GAGCCCACCGGCTTCCCCACCGCCAATAGCCCCCCACGATCACGCCTTCCTGCCGCCCCCTTGAAAAGACTGCCATCTGG CAGCAGATAAGATGCCAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MVIFDANFLLLLLDPDVDVPKDPATGRPLTRAKDRVEALIATLSKQREAIGIPTPVIAEILVHAGSAGPRYLSVINNTSR FRILPFDLRSAVELAAMTASAIAAGDKRSGSLAPWQKVKVDRQIAAIAIVGNASSIYTDDEGVVTLAKAAKIPTISSWDL PLPPEDTQRTLDI
Sequences:
>Translated_173_residues MVIFDANFLLLLLDPDVDVPKDPATGRPLTRAKDRVEALIATLSKQREAIGIPTPVIAEILVHAGSAGPRYLSVINNTSR FRILPFDLRSAVELAAMTASAIAAGDKRSGSLAPWQKVKVDRQIAAIAIVGNASSIYTDDEGVVTLAKAAKIPTISSWDL PLPPEDTQRTLDI >Mature_173_residues MVIFDANFLLLLLDPDVDVPKDPATGRPLTRAKDRVEALIATLSKQREAIGIPTPVIAEILVHAGSAGPRYLSVINNTSR FRILPFDLRSAVELAAMTASAIAAGDKRSGSLAPWQKVKVDRQIAAIAIVGNASSIYTDDEGVVTLAKAAKIPTISSWDL PLPPEDTQRTLDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18522; Mature: 18522
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIFDANFLLLLLDPDVDVPKDPATGRPLTRAKDRVEALIATLSKQREAIGIPTPVIAEI CEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LVHAGSAGPRYLSVINNTSRFRILPFDLRSAVELAAMTASAIAAGDKRSGSLAPWQKVKV HHHCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH DRQIAAIAIVGNASSIYTDDEGVVTLAKAAKIPTISSWDLPLPPEDTQRTLDI CCEEEEEEEECCCCEEEECCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVIFDANFLLLLLDPDVDVPKDPATGRPLTRAKDRVEALIATLSKQREAIGIPTPVIAEI CEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LVHAGSAGPRYLSVINNTSRFRILPFDLRSAVELAAMTASAIAAGDKRSGSLAPWQKVKV HHHCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH DRQIAAIAIVGNASSIYTDDEGVVTLAKAAKIPTISSWDLPLPPEDTQRTLDI CCEEEEEEEECCCCEEEECCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA