| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594222
Identifier: 83594222
GI number: 83594222
Start: 3334110
End: 3334556
Strand: Direct
Name: 83594222
Synonym: Rru_A2890
Alternate gene names: NA
Gene position: 3334110-3334556 (Clockwise)
Preceding gene: 83594221
Following gene: 83594223
Centisome position: 76.6
GC content: 66.0
Gene sequence:
>447_bases ATGACCCCGGCGCTTACGCCCCTGCGGGGAACCGGCGACCCGCTGGGGGCCGGCGTTCCCAGCCTCGCCGATGGACCGAC GCGCGGGCGCCTGACCCCGGCGGCGATCGACGGCTTTGTCCGCCTTGTCGCGATTTGGCGGCTGAGCACGGCCGAAGCCT GCGCCCTTCTTGGCGATGTTTCCGAAAGAACGTGGTTCCGCATGAAGAAGGGAACATGGTCGGGAACGCTTTCCCAAGAT GCCCTGACCCGGATCAGCGCCTTGATCGGCCTCTATAAAGGCTTGCGCCTGCTGTTTTCCTCGCCGCTGGCCGAGGAGTG GATCGGCCTGCCCAACGCCAGTCCGCTTTATCACGGTCAGCGCCCCCTTGATGGCATGATCGAAGGCGGCATTCCCCGGA TGCTGGCGGTGCGCCGCCATATCGATGCCCTGCGTGGCGGATTGTGA
Upstream 100 bases:
>100_bases GCCAATAGCCCCCCACGATCACGCCTTCCTGCCGCCCCCTTGAAAAGACTGCCATCTGGCAGCAGATAAGATGCCAAAGG GCAGCTTTGGAGGAAGAGGG
Downstream 100 bases:
>100_bases GCCTCTTCCCGCCGCCGACCATCCCTTTGGCCCAGCGCGATACCGTCCGCCTGATCCCGACGGCGCGCCTGAAGGAGCCG GTGCTTCAGCCGCTGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MTPALTPLRGTGDPLGAGVPSLADGPTRGRLTPAAIDGFVRLVAIWRLSTAEACALLGDVSERTWFRMKKGTWSGTLSQD ALTRISALIGLYKGLRLLFSSPLAEEWIGLPNASPLYHGQRPLDGMIEGGIPRMLAVRRHIDALRGGL
Sequences:
>Translated_148_residues MTPALTPLRGTGDPLGAGVPSLADGPTRGRLTPAAIDGFVRLVAIWRLSTAEACALLGDVSERTWFRMKKGTWSGTLSQD ALTRISALIGLYKGLRLLFSSPLAEEWIGLPNASPLYHGQRPLDGMIEGGIPRMLAVRRHIDALRGGL >Mature_147_residues TPALTPLRGTGDPLGAGVPSLADGPTRGRLTPAAIDGFVRLVAIWRLSTAEACALLGDVSERTWFRMKKGTWSGTLSQDA LTRISALIGLYKGLRLLFSSPLAEEWIGLPNASPLYHGQRPLDGMIEGGIPRMLAVRRHIDALRGGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15843; Mature: 15712
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPALTPLRGTGDPLGAGVPSLADGPTRGRLTPAAIDGFVRLVAIWRLSTAEACALLGDV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH SERTWFRMKKGTWSGTLSQDALTRISALIGLYKGLRLLFSSPLAEEWIGLPNASPLYHGQ HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCC RPLDGMIEGGIPRMLAVRRHIDALRGGL CCCCHHHCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TPALTPLRGTGDPLGAGVPSLADGPTRGRLTPAAIDGFVRLVAIWRLSTAEACALLGDV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH SERTWFRMKKGTWSGTLSQDALTRISALIGLYKGLRLLFSSPLAEEWIGLPNASPLYHGQ HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCC RPLDGMIEGGIPRMLAVRRHIDALRGGL CCCCHHHCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]