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The map label for this gene is 83594213

Identifier: 83594213

GI number: 83594213

Start: 3320745

End: 3322115

Strand: Direct

Name: 83594213

Synonym: Rru_A2881

Alternate gene names: NA

Gene position: 3320745-3322115 (Clockwise)

Preceding gene: 83594212

Following gene: 83594217

Centisome position: 76.29

GC content: 66.3

Gene sequence:

>1371_bases
ATGATCCGACTGCGTATCATCGTTCCCCTCGTCGCCCTTACCCTCCTCGGCATTGGCTTTGCTGCCACCCATACCAAGCA
ATTCACCACCGGCAGTCTTCCCGACCCGAAGATCGAGATGCCCAAGGGCCCGCAAAACGCCCTGGTGGTGCTGATCTCCG
ATGCCCAGGGCTGGTCCGACGAGGACGACCGCCTCAGCGCCCGCCTCAAGGACAGCGGCTCGGTGGTGGTCGGCATCGAC
CTGCCGCGCTATCTGGCGATTCTGGAAAAAGACCCCGAGGACTGCGTCTATCTGGTCGGCGATATCGAGGAATTGAGCCA
GGAGGTGCAGAAGGCGGCCGGGGGATCGGCCTATGTCCTGCCGGTGATCGCCGGCAGCGGCGAGGGCGCCGATCTGGCTT
TGGCAATGGCCGCCCAGACCCCCGATGCGACCATCGGCCATACCCTGGCCGTCGATCCCACCGGCGGCCTGCCGCTCAAG
AAGATCCTGTGCACCGACGCACCGCACCGCACGACGACGGCCGGCATCGCCTATGGCCTGCAAACCGGCCCGGTGCCCAA
TCCGATCGATACGCTGTTCACCCCGGCCGCCCCGGCGCCGGGGCGCGACCATGTCGCCAGCTTGCGCGAAACCTGGGGAG
CGATCACGGCGACCGAAACCACCCAGCCCGCCAAGGCCGCGCTTGAAACCGCCCTGATGGCCCTGCTCACCGACCCATCG
GCCAAAACCAAGGACGCCTGGGCCACCGAACTGCCAACCACGGCCACCCGCGATACCCTGGCGATCGTCTATTCCGGGGA
TGGCGGCTGGCGTGATCTTGACAAGGAAATCGCCGACGAATTCCAAAAGCGCGGCGTGCCCACCCTGGGGGTCGACTCCT
TGCGCGCCTTCTGGAGCCGGAAAACCCCCGAGGAAACCGCCAAGACCCTGTCGCGGCTGATCAATACCTATACCCGGCGC
TGGCAGGTGAACAAGGTGCTGCTGGTCGGTTATTCCTTCGGCGCCGACATCCTGCCCGCCACCCTGGCCGCCCTGCCCGA
GGCCGACCGCGCCCGCATCACCCAGATTTCCCTGCTCGGCTTTTCCACCGAGGCCAATTTCGAAATCTCGGTGACCGGCT
GGTTCGGCGCCAAGCACGGCGAAAGCCAGCCCACCTTGCCCGACCTCGCCAAACTCGACCCGGCGCAAATCCAGTGCTTC
TACGGCCTGGAAGAAGACGACAGCGCCTGCCCCAAGCTCAAGGACAGCGGCATCGAAATCCTGTCGACCACCGGCGGCCA
CCACTTCGACGGCGACTACAAGGCCCTGGCCACCCGCATCCTCGCCGGCCTCGACCGCCGCGCGGCCCTGGCCGAGGCGG
AGGGGAAATAG

Upstream 100 bases:

>100_bases
AACCGCGCTACCTGGCTGTCGCCGGCGGCCTCAACCCCGCTCTCGCCCTCGCCGACATCGCCACACTGATTGGCGGCGGC
CTGAAAGGAGTGGTCGGAAA

Downstream 100 bases:

>100_bases
GGGGAAGGTCGGAGATTTCATGGTTAGGAAACAGCCTCCAACCCCATGAAAAAAGCCAGCCCAAACCGGCTGGCTTTTTT
CATGGGGAAGTGGTGGGCCC

Product: virulence protein

Products: NA

Alternate protein names: Virulence Protein; Type IV Secretory Pathway VirJ Component-Like Protein; Acid lerance Protein; Type IV Secretion System VirJ-Like Protein; AcvB-Related Protein; Acid Virulence Protein B; Type IV Secretory Pathway VirJ Component-Like; Type IV Secretory Pathway Virj Component-Related Protein; Virj-Like Protein; Glycosyl Transferase/Polysaccharide Deacetylase; Type IV Secretory Pathway VirJ Component; Virulance And Acid lerance Protein; Type IV Secretion System Virj-Like Protein; Virulence Factor; Chromosomal Virulence Protein B

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MIRLRIIVPLVALTLLGIGFAATHTKQFTTGSLPDPKIEMPKGPQNALVVLISDAQGWSDEDDRLSARLKDSGSVVVGID
LPRYLAILEKDPEDCVYLVGDIEELSQEVQKAAGGSAYVLPVIAGSGEGADLALAMAAQTPDATIGHTLAVDPTGGLPLK
KILCTDAPHRTTTAGIAYGLQTGPVPNPIDTLFTPAAPAPGRDHVASLRETWGAITATETTQPAKAALETALMALLTDPS
AKTKDAWATELPTTATRDTLAIVYSGDGGWRDLDKEIADEFQKRGVPTLGVDSLRAFWSRKTPEETAKTLSRLINTYTRR
WQVNKVLLVGYSFGADILPATLAALPEADRARITQISLLGFSTEANFEISVTGWFGAKHGESQPTLPDLAKLDPAQIQCF
YGLEEDDSACPKLKDSGIEILSTTGGHHFDGDYKALATRILAGLDRRAALAEAEGK

Sequences:

>Translated_456_residues
MIRLRIIVPLVALTLLGIGFAATHTKQFTTGSLPDPKIEMPKGPQNALVVLISDAQGWSDEDDRLSARLKDSGSVVVGID
LPRYLAILEKDPEDCVYLVGDIEELSQEVQKAAGGSAYVLPVIAGSGEGADLALAMAAQTPDATIGHTLAVDPTGGLPLK
KILCTDAPHRTTTAGIAYGLQTGPVPNPIDTLFTPAAPAPGRDHVASLRETWGAITATETTQPAKAALETALMALLTDPS
AKTKDAWATELPTTATRDTLAIVYSGDGGWRDLDKEIADEFQKRGVPTLGVDSLRAFWSRKTPEETAKTLSRLINTYTRR
WQVNKVLLVGYSFGADILPATLAALPEADRARITQISLLGFSTEANFEISVTGWFGAKHGESQPTLPDLAKLDPAQIQCF
YGLEEDDSACPKLKDSGIEILSTTGGHHFDGDYKALATRILAGLDRRAALAEAEGK
>Mature_456_residues
MIRLRIIVPLVALTLLGIGFAATHTKQFTTGSLPDPKIEMPKGPQNALVVLISDAQGWSDEDDRLSARLKDSGSVVVGID
LPRYLAILEKDPEDCVYLVGDIEELSQEVQKAAGGSAYVLPVIAGSGEGADLALAMAAQTPDATIGHTLAVDPTGGLPLK
KILCTDAPHRTTTAGIAYGLQTGPVPNPIDTLFTPAAPAPGRDHVASLRETWGAITATETTQPAKAALETALMALLTDPS
AKTKDAWATELPTTATRDTLAIVYSGDGGWRDLDKEIADEFQKRGVPTLGVDSLRAFWSRKTPEETAKTLSRLINTYTRR
WQVNKVLLVGYSFGADILPATLAALPEADRARITQISLLGFSTEANFEISVTGWFGAKHGESQPTLPDLAKLDPAQIQCF
YGLEEDDSACPKLKDSGIEILSTTGGHHFDGDYKALATRILAGLDRRAALAEAEGK

Specific function: Unknown

COG id: COG3946

COG function: function code U; Type IV secretory pathway, VirJ component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48547; Mature: 48547

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLRIIVPLVALTLLGIGFAATHTKQFTTGSLPDPKIEMPKGPQNALVVLISDAQGWSD
CEEEEHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
EDDRLSARLKDSGSVVVGIDLPRYLAILEKDPEDCVYLVGDIEELSQEVQKAAGGSAYVL
CCHHHHHEECCCCCEEEEECCHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCEEEE
PVIAGSGEGADLALAMAAQTPDATIGHTLAVDPTGGLPLKKILCTDAPHRTTTAGIAYGL
EEEECCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCHHHHEECC
QTGPVPNPIDTLFTPAAPAPGRDHVASLRETWGAITATETTQPAKAALETALMALLTDPS
CCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCCC
AKTKDAWATELPTTATRDTLAIVYSGDGGWRDLDKEIADEFQKRGVPTLGVDSLRAFWSR
CCCCCCHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
KTPEETAKTLSRLINTYTRRWQVNKVLLVGYSFGADILPATLAALPEADRARITQISLLG
CCHHHHHHHHHHHHHHHHHHEEECEEEEEEECCCCHHHHHHHHHCCCCCCCEEEEEEEEE
FSTEANFEISVTGWFGAKHGESQPTLPDLAKLDPAQIQCFYGLEEDDSACPKLKDSGIEI
ECCCCCEEEEEEEEECCCCCCCCCCCCHHHCCCHHHEEEEECCCCCCCCCCCCCCCCCEE
LSTTGGHHFDGDYKALATRILAGLDRRAALAEAEGK
EECCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCC
>Mature Secondary Structure
MIRLRIIVPLVALTLLGIGFAATHTKQFTTGSLPDPKIEMPKGPQNALVVLISDAQGWSD
CEEEEHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
EDDRLSARLKDSGSVVVGIDLPRYLAILEKDPEDCVYLVGDIEELSQEVQKAAGGSAYVL
CCHHHHHEECCCCCEEEEECCHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCEEEE
PVIAGSGEGADLALAMAAQTPDATIGHTLAVDPTGGLPLKKILCTDAPHRTTTAGIAYGL
EEEECCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCHHHHEECC
QTGPVPNPIDTLFTPAAPAPGRDHVASLRETWGAITATETTQPAKAALETALMALLTDPS
CCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCCC
AKTKDAWATELPTTATRDTLAIVYSGDGGWRDLDKEIADEFQKRGVPTLGVDSLRAFWSR
CCCCCCHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
KTPEETAKTLSRLINTYTRRWQVNKVLLVGYSFGADILPATLAALPEADRARITQISLLG
CCHHHHHHHHHHHHHHHHHHEEECEEEEEEECCCCHHHHHHHHHCCCCCCCEEEEEEEEE
FSTEANFEISVTGWFGAKHGESQPTLPDLAKLDPAQIQCFYGLEEDDSACPKLKDSGIEI
ECCCCCEEEEEEEEECCCCCCCCCCCCHHHCCCHHHEEEEECCCCCCCCCCCCCCCCCEE
LSTTGGHHFDGDYKALATRILAGLDRRAALAEAEGK
EECCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA