Click here to switch to the map view.

The map label for this gene is flbT1 [H]

Identifier: 83594189

GI number: 83594189

Start: 3290239

End: 3290685

Strand: Reverse

Name: flbT1 [H]

Synonym: Rru_A2857

Alternate gene names: 83594189

Gene position: 3290685-3290239 (Counterclockwise)

Preceding gene: 83594190

Following gene: 83594188

Centisome position: 75.6

GC content: 51.9

Gene sequence:

>447_bases
ATGCCCCTTAAGGTCACGCTCAAGCCCAACGAGAAGATCCTGGTCGGAACGGCGGTCATCGCCAACGGACCCAATAAAGC
CGAACTGGTGATTCTCAATCGCGTACCGGTTTTGCGGCAGAAGGATATCGTTACCGAGGACCAAGCGGATACGGTTGCCA
AGAAGCTGTATTTCGCCATCCTCAACATGTATGTCGCCCCAGAAAAGGAGCGAGATTTCCATAACCTTTACTTTCTTCTG
CTAAGACAGCTTATCTTGCTGCCTCTGGAACCTCGGGCGATCGATCTTATGCATGAGGTTTCGGAATGCATCATCAGTGG
CGATCACTATCGGGCGCTTAAGGTCTGCCGAAAACTCATCGATTACGAAGCGGAGGTTTTGAGACATGGTGAAGGATCCG
ATCCGGGCCTATCAGCAAAGCCAGAAGTCGACTCTCACACCCCGTGA

Upstream 100 bases:

>100_bases
TAATCCCCTTAACCGGCTGCGGCCGGATAGTCCCGGGCGTAACCGCTGAGTGGTTCGCCCTTCAAGGGCTACGGTTTCCC
TTCGTCATGGTCAATGGTTC

Downstream 100 bases:

>100_bases
GGTCGAGGCGATGGCCTTTACTAAGGCGGCAGTGATGCTGGAGGAGGCCCGGACCAAGCCCAACGATAAGACCGCGTTCT
CCCAGGCCCTGCGCTTCAAT

Product: flagellar FlbT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MPLKVTLKPNEKILVGTAVIANGPNKAELVILNRVPVLRQKDIVTEDQADTVAKKLYFAILNMYVAPEKERDFHNLYFLL
LRQLILLPLEPRAIDLMHEVSECIISGDHYRALKVCRKLIDYEAEVLRHGEGSDPGLSAKPEVDSHTP

Sequences:

>Translated_148_residues
MPLKVTLKPNEKILVGTAVIANGPNKAELVILNRVPVLRQKDIVTEDQADTVAKKLYFAILNMYVAPEKERDFHNLYFLL
LRQLILLPLEPRAIDLMHEVSECIISGDHYRALKVCRKLIDYEAEVLRHGEGSDPGLSAKPEVDSHTP
>Mature_147_residues
PLKVTLKPNEKILVGTAVIANGPNKAELVILNRVPVLRQKDIVTEDQADTVAKKLYFAILNMYVAPEKERDFHNLYFLLL
RQLILLPLEPRAIDLMHEVSECIISGDHYRALKVCRKLIDYEAEVLRHGEGSDPGLSAKPEVDSHTP

Specific function: Has a post-transcriptional repressor function in flagellum biogenesis. Associates with the 5'-UTR of fljK mRNA and promotes its degradation [H]

COG id: COG5443

COG function: function code N; Flagellar biosynthesis regulator FlbT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flbT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009967
- InterPro:   IPR016006 [H]

Pfam domain/function: PF07378 FlbT [H]

EC number: NA

Molecular weight: Translated: 16708; Mature: 16577

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLKVTLKPNEKILVGTAVIANGPNKAELVILNRVPVLRQKDIVTEDQADTVAKKLYFAI
CCEEEEECCCCEEEEEEEEEECCCCCEEEEEECCCCCHHCCCCCCCCHHHHHHHHHHHHH
LNMYVAPEKERDFHNLYFLLLRQLILLPLEPRAIDLMHEVSECIISGDHYRALKVCRKLI
HHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
DYEAEVLRHGEGSDPGLSAKPEVDSHTP
HHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PLKVTLKPNEKILVGTAVIANGPNKAELVILNRVPVLRQKDIVTEDQADTVAKKLYFAI
CEEEEECCCCEEEEEEEEEECCCCCEEEEEECCCCCHHCCCCCCCCHHHHHHHHHHHHH
LNMYVAPEKERDFHNLYFLLLRQLILLPLEPRAIDLMHEVSECIISGDHYRALKVCRKLI
HHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
DYEAEVLRHGEGSDPGLSAKPEVDSHTP
HHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]