| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is fljK [H]
Identifier: 83594190
GI number: 83594190
Start: 3290935
End: 3291804
Strand: Reverse
Name: fljK [H]
Synonym: Rru_A2858
Alternate gene names: 83594190
Gene position: 3291804-3290935 (Counterclockwise)
Preceding gene: 83594195
Following gene: 83594189
Centisome position: 75.62
GC content: 60.34
Gene sequence:
>870_bases ATGGCCGACAACATTACGCTTTCTTCCTCCACGCGTTCGAACCTGCTGGCGCTGACCCGGACCACCGATTTGATCGGTAG GACCCAGGATCGTCTGTCCACCGGCAAGGCCGTGAACAGCGCCATCGACGACGCGCTGTCGTTCTTCAAAGCCCGTAACC TCAATAGCCGCGCCACCGATCTTGCCACCATCAAGAACGGCATCAGCGAAGGCATCCAGGTTCTGAAGACGGCGACCGAC GCCCTTGAGAATGTCGAAGACGTCCTGAAGCAGATGAAGGCCATCGCCGCCTCGGCGAAAGCTACGGCCAGTGCCGACTC GACCACCCGCGCCAAGCTGTCGAGCCAGTTCAACGAACTGCGCAGCCAGATCGACCATCTGACCAATGACGCTAACTACG GCGGCGTGAACCTGATCAAGTCGGGCGCCGATACCCTGACCGTCAAGTTCTCGGAATCGCCCTCGGCCTCCGACCGCAAG CTGGTCATCAAGGGCATCGCCTCGAACGTGGACGGCACCTCGGGCATCAGCGTCTCTTCGGCGCAGAATGCCGCGGCGGG TTGGGCCGATACCACCGTTTCGGTCTATGGCGGCGTCATCGACAACGCGATCAACCAAATCGACTCGGCCCTGACCACGG TTCGTGACTCGGCTCAGACCTTTGGTACCAACGCGTCGATGCTTCAGATCCGCGAGGATTTCACCTCCACTCTGATCAAC ACTCTGGAAGGTGGCGCCGCGGACCTGGTCAACGCCGATCTGAACAAGGAATCGGCCAACATGCTGTCGTTGAAGACCCG CCAGCAGCTCGGCACGATCTCTCTCTCGATCGCTCAGCAGTCCGAACAGGCCGTTCTGCGTCTGTTCTAA
Upstream 100 bases:
>100_bases ATGCCCGCTTGTCCCGCAAGCCGTGGGACCCGTCGCAAGGCGGGCCAGTCGCCGATGACAAGAACGTCACCCGCAGCGAT CCTAGAAAGGGATTGATACT
Downstream 100 bases:
>100_bases GGTCTCCGCCGACGACGAAGACGAACGGGAACGGCGGTCGGGTGTCCGACCGCCGTTTTCCTTCAAAGGGATCAAGCATA CCACGGACCATTCCGGGCGG
Product: flagellin-like
Products: NA
Alternate protein names: 25 kDa flagellin [H]
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MADNITLSSSTRSNLLALTRTTDLIGRTQDRLSTGKAVNSAIDDALSFFKARNLNSRATDLATIKNGISEGIQVLKTATD ALENVEDVLKQMKAIAASAKATASADSTTRAKLSSQFNELRSQIDHLTNDANYGGVNLIKSGADTLTVKFSESPSASDRK LVIKGIASNVDGTSGISVSSAQNAAAGWADTTVSVYGGVIDNAINQIDSALTTVRDSAQTFGTNASMLQIREDFTSTLIN TLEGGAADLVNADLNKESANMLSLKTRQQLGTISLSIAQQSEQAVLRLF
Sequences:
>Translated_289_residues MADNITLSSSTRSNLLALTRTTDLIGRTQDRLSTGKAVNSAIDDALSFFKARNLNSRATDLATIKNGISEGIQVLKTATD ALENVEDVLKQMKAIAASAKATASADSTTRAKLSSQFNELRSQIDHLTNDANYGGVNLIKSGADTLTVKFSESPSASDRK LVIKGIASNVDGTSGISVSSAQNAAAGWADTTVSVYGGVIDNAINQIDSALTTVRDSAQTFGTNASMLQIREDFTSTLIN TLEGGAADLVNADLNKESANMLSLKTRQQLGTISLSIAQQSEQAVLRLF >Mature_288_residues ADNITLSSSTRSNLLALTRTTDLIGRTQDRLSTGKAVNSAIDDALSFFKARNLNSRATDLATIKNGISEGIQVLKTATDA LENVEDVLKQMKAIAASAKATASADSTTRAKLSSQFNELRSQIDHLTNDANYGGVNLIKSGADTLTVKFSESPSASDRKL VIKGIASNVDGTSGISVSSAQNAAAGWADTTVSVYGGVIDNAINQIDSALTTVRDSAQTFGTNASMLQIREDFTSTLINT LEGGAADLVNADLNKESANMLSLKTRQQLGTISLSIAQQSEQAVLRLF
Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Secreted. Bacterial flagellum [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial flagellin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001492 - InterPro: IPR001029 [H]
Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]
EC number: NA
Molecular weight: Translated: 30411; Mature: 30280
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADNITLSSSTRSNLLALTRTTDLIGRTQDRLSTGKAVNSAIDDALSFFKARNLNSRATD CCCCEECCCCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH LATIKNGISEGIQVLKTATDALENVEDVLKQMKAIAASAKATASADSTTRAKLSSQFNEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RSQIDHLTNDANYGGVNLIKSGADTLTVKFSESPSASDRKLVIKGIASNVDGTSGISVSS HHHHHHHCCCCCCCCHHHEECCCCEEEEEECCCCCCCCCCEEEEHHHCCCCCCCCCEECC AQNAAAGWADTTVSVYGGVIDNAINQIDSALTTVRDSAQTFGTNASMLQIREDFTSTLIN CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH TLEGGAADLVNADLNKESANMLSLKTRQQLGTISLSIAQQSEQAVLRLF HHCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHCC >Mature Secondary Structure ADNITLSSSTRSNLLALTRTTDLIGRTQDRLSTGKAVNSAIDDALSFFKARNLNSRATD CCCEECCCCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH LATIKNGISEGIQVLKTATDALENVEDVLKQMKAIAASAKATASADSTTRAKLSSQFNEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RSQIDHLTNDANYGGVNLIKSGADTLTVKFSESPSASDRKLVIKGIASNVDGTSGISVSS HHHHHHHCCCCCCCCHHHEECCCCEEEEEECCCCCCCCCCEEEEHHHCCCCCCCCCEECC AQNAAAGWADTTVSVYGGVIDNAINQIDSALTTVRDSAQTFGTNASMLQIREDFTSTLIN CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH TLEGGAADLVNADLNKESANMLSLKTRQQLGTISLSIAQQSEQAVLRLF HHCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10940048; 11259647; 3469658 [H]