| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is zraS [C]
Identifier: 83594152
GI number: 83594152
Start: 3253365
End: 3255854
Strand: Reverse
Name: zraS [C]
Synonym: Rru_A2820
Alternate gene names: 83594152
Gene position: 3255854-3253365 (Counterclockwise)
Preceding gene: 83594153
Following gene: 83594151
Centisome position: 74.8
GC content: 69.24
Gene sequence:
>2490_bases ATGAGTGACGCGGTGCTGATTCGCGAGCCGGCCCTGTGGGGGCTGGGGGCGGGCCTGGGCGGGGCGCTGGCGGGCGGCTT GTGGTCGGCCCTGGGCGAATTGCCGGTGGCCGGCTGGGTGGCGGCGATCGGTGCCACCATCGCCCTGGGATCGCTGGCCG CCCTGCTGCGCCGCTTCGCCCAATGGGGCGAGGCCGCCGCCCGCGGCGGGGCCGCCGCCGCCTTGCTTGATATCGAAGAC GGCCCGCGCCTGCTGATCGGCGCCGATGGCGGGGCGCGCTACGCCAATTCCCAGGCCAGAACCCTGTGGGGCGGCCACCC GCCGCTGGCCCATCTGCGCCAGCGTCTGCATGGCGACATGATGGCCGCCGATGCCCTGGGGCGCTTGGAGGAGGCGGCGC GCATCGGTCTGCGCGAGGAGGTCGACCTGCCGTTGCGCGATCCCGAAGGCTATAGCGGCGAGCCCGAATGGGTGCGGGTG ATGGTGGCGCCCGGCCGCGAACCGGGCAGTCGCTTGTGGTCGTGCCGCGATGTCACGGCGCGCCGCGCCATCGACGAGGT TTTGCTGCGTGAGCGCGAGGAACTGGCCGATTTCCTTTATTTCCTGCCCGTTGGCCTTTATTCGGCCGATACGGATGGCC GGTTGCGCTACGCCAATCAGGTTTTCGCCCAATGGCTGGGCCGCGATACCGACGCCATGGTCGGCCTGGATATCGACGCG GTGATGGAAGGCCCGGCCCCCGAACCCGATGGGGCCTGGGAGGGCCGCCTGCGCTTTCTTCCCGTCGACGAGCCGGCTTT TGACGCCGAGGTGCGCCAATCGACCTTTGATGACGCCGGCCAGCTACGCACCCGATCGGTGGTGGTGCGTCTGCCCGCCG GCGAGGCCGCGCCGACGGCGGGCGAGGGCGGCTGGCTGCGTCGGCGGCCCTGGCTGTTCGACGGCGCCCCGGTGGGGATC GTGCTGACCGACCCGGAAGGGGCGATCACCGATTGCAACGCCTCGTTCCTGGCGATGGTCGGGCTGGAGGCGGCCGATGT CTTTGACCGGCCGCTGGCCGATCTGGCGGCGCGCAACGACCGCGAGGACCTGCGGGCGCTGGTCGACAAGGTGGTGGGCG GCGGCACCGCCCAGGCCGATATCCGCCTGGTGCGCGGCGAACGCGAGGTGGCCGTCGGCGTGTTCTTGTCGCCGATGACC AGCCTGAGCGGCCGCCCCGGCGATCCGCCCGATGGCGCGGTCGCCCATCTGATCGACACCACCGAGCAAAAGAACCTGGA GCAGCAGTTCGCCCAGGCCCAGAAGATGCAGGCGATGGGCCAGCTCGCCGGGGGCGTCGCCCATGATTTCAACAATCTGC TGACGGCGATGATCGGCTTTTCCGATTTGCTGTTGCAACGCCACGGCATCGGCGATCCCAGTTTCGCCGATATCATGCAG ATCAAGCAAAACGCCAATCGCGCCGCCAATCTGGTGCGCCAGCTTCTCGCCTTCTCGCGCCGCCAGCCCTTGCGGCCGCG CTTGCTCAATGTGACCGACGCGCTGTCGGAGCTGTCGCATCTGCTGCGCCGCCTGCTTGGCGAGAGGGTGGTCCTGAAGC TCGCCCACGGCCGCGAACCCGTCCATATCCGCGTCGATCCCGGCCAGTTCGATCAGGTCATCATCAATCTGGCGGTCAAT GCCCGCGACGCCATGCCCGGCGGCGGGCAACTGACCATCTCGACCCGGCGCGAGGCGGTCGAGACCGAGATGAACCAGGG GACCGAGGCGGTGCCGCCCGGGGATTACGTGGTCATTGATGTCGTCGATACCGGCACCGGCATCACCCGCGAGAACCTTG GTCGGCTGTTCGAGCCGTTCTTCACCACCAAATCGGAAGGAACGGCGGGAGCGGGGACCGGGCTTGGGCTGTCAACCGTT TACGGCATCGTCCGCCAGACCGAGGGCTTCATCTTCGTCGAATCGACCCTGGGCGAGGGGGCGACCTTCACCATCTATCT GCCGCGCCACGAGCCGCCCGTCGAGGTCGCCGGAGCGGGCGCCGGCGGGGCCGAGGGCGGAGTGGGGCCGGGCGACGGCG CGCCGGGCGGGGGCGGCGAGGAAGGGGGCGAGGCCCGCGACCTGACGGGCAAGGAGACCATCTTGCTGGTCGAGGACGAG GACGCCGTGCGGGTGTTCGGATCGCGGGCCCTGCGCAACAAGGGCTATACGGTGCTCGAAGCCCGCTCGGGCGAAGGCGC GCTGGATGTGCTCGAGGACGGTGCCGAGATCGACCTGCTGATCACCGATATGGTGATGCCGGGCATGGATGGGGCCACCC TGGCCGGCCGGGTGCGCGAGGCGCGGCCCGATCTGAAGATCATCCTGATTTCGGGCTATTCCGAGGATGTCATTCGCGGC GATATCGTCAACCAGCCCGATACCCACTTCCTGCCCAAGCCGTTCAGCCTGAAAGCCCTGGCCGAAAAGGTCCGCGAGGT TCTGGCGTGA
Upstream 100 bases:
>100_bases GCCGTCGAGATCGATCATGAAATTCCCCCCGACCACTACAAGGCGGTGGCCGAGGTGATCGGCTATGTCATGCGCCTGAA GAAGGCGACGAAGAGATAGC
Downstream 100 bases:
>100_bases ACGGTGATCTTGTTCTGTTCTATTTTGCCCCTTGAATGCGAGAACAAAAAGAGTACGTTTGAGCATGGTTGCGCGTGCGG GCGCGGCCATGGGATAACGG
Product: multi-sensor hybrid histidine kinase / cell cycle control histidine kinase CckA
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 829; Mature: 828
Protein sequence:
>829_residues MSDAVLIREPALWGLGAGLGGALAGGLWSALGELPVAGWVAAIGATIALGSLAALLRRFAQWGEAAARGGAAAALLDIED GPRLLIGADGGARYANSQARTLWGGHPPLAHLRQRLHGDMMAADALGRLEEAARIGLREEVDLPLRDPEGYSGEPEWVRV MVAPGREPGSRLWSCRDVTARRAIDEVLLREREELADFLYFLPVGLYSADTDGRLRYANQVFAQWLGRDTDAMVGLDIDA VMEGPAPEPDGAWEGRLRFLPVDEPAFDAEVRQSTFDDAGQLRTRSVVVRLPAGEAAPTAGEGGWLRRRPWLFDGAPVGI VLTDPEGAITDCNASFLAMVGLEAADVFDRPLADLAARNDREDLRALVDKVVGGGTAQADIRLVRGEREVAVGVFLSPMT SLSGRPGDPPDGAVAHLIDTTEQKNLEQQFAQAQKMQAMGQLAGGVAHDFNNLLTAMIGFSDLLLQRHGIGDPSFADIMQ IKQNANRAANLVRQLLAFSRRQPLRPRLLNVTDALSELSHLLRRLLGERVVLKLAHGREPVHIRVDPGQFDQVIINLAVN ARDAMPGGGQLTISTRREAVETEMNQGTEAVPPGDYVVIDVVDTGTGITRENLGRLFEPFFTTKSEGTAGAGTGLGLSTV YGIVRQTEGFIFVESTLGEGATFTIYLPRHEPPVEVAGAGAGGAEGGVGPGDGAPGGGGEEGGEARDLTGKETILLVEDE DAVRVFGSRALRNKGYTVLEARSGEGALDVLEDGAEIDLLITDMVMPGMDGATLAGRVREARPDLKIILISGYSEDVIRG DIVNQPDTHFLPKPFSLKALAEKVREVLA
Sequences:
>Translated_829_residues MSDAVLIREPALWGLGAGLGGALAGGLWSALGELPVAGWVAAIGATIALGSLAALLRRFAQWGEAAARGGAAAALLDIED GPRLLIGADGGARYANSQARTLWGGHPPLAHLRQRLHGDMMAADALGRLEEAARIGLREEVDLPLRDPEGYSGEPEWVRV MVAPGREPGSRLWSCRDVTARRAIDEVLLREREELADFLYFLPVGLYSADTDGRLRYANQVFAQWLGRDTDAMVGLDIDA VMEGPAPEPDGAWEGRLRFLPVDEPAFDAEVRQSTFDDAGQLRTRSVVVRLPAGEAAPTAGEGGWLRRRPWLFDGAPVGI VLTDPEGAITDCNASFLAMVGLEAADVFDRPLADLAARNDREDLRALVDKVVGGGTAQADIRLVRGEREVAVGVFLSPMT SLSGRPGDPPDGAVAHLIDTTEQKNLEQQFAQAQKMQAMGQLAGGVAHDFNNLLTAMIGFSDLLLQRHGIGDPSFADIMQ IKQNANRAANLVRQLLAFSRRQPLRPRLLNVTDALSELSHLLRRLLGERVVLKLAHGREPVHIRVDPGQFDQVIINLAVN ARDAMPGGGQLTISTRREAVETEMNQGTEAVPPGDYVVIDVVDTGTGITRENLGRLFEPFFTTKSEGTAGAGTGLGLSTV YGIVRQTEGFIFVESTLGEGATFTIYLPRHEPPVEVAGAGAGGAEGGVGPGDGAPGGGGEEGGEARDLTGKETILLVEDE DAVRVFGSRALRNKGYTVLEARSGEGALDVLEDGAEIDLLITDMVMPGMDGATLAGRVREARPDLKIILISGYSEDVIRG DIVNQPDTHFLPKPFSLKALAEKVREVLA >Mature_828_residues SDAVLIREPALWGLGAGLGGALAGGLWSALGELPVAGWVAAIGATIALGSLAALLRRFAQWGEAAARGGAAAALLDIEDG PRLLIGADGGARYANSQARTLWGGHPPLAHLRQRLHGDMMAADALGRLEEAARIGLREEVDLPLRDPEGYSGEPEWVRVM VAPGREPGSRLWSCRDVTARRAIDEVLLREREELADFLYFLPVGLYSADTDGRLRYANQVFAQWLGRDTDAMVGLDIDAV MEGPAPEPDGAWEGRLRFLPVDEPAFDAEVRQSTFDDAGQLRTRSVVVRLPAGEAAPTAGEGGWLRRRPWLFDGAPVGIV LTDPEGAITDCNASFLAMVGLEAADVFDRPLADLAARNDREDLRALVDKVVGGGTAQADIRLVRGEREVAVGVFLSPMTS LSGRPGDPPDGAVAHLIDTTEQKNLEQQFAQAQKMQAMGQLAGGVAHDFNNLLTAMIGFSDLLLQRHGIGDPSFADIMQI KQNANRAANLVRQLLAFSRRQPLRPRLLNVTDALSELSHLLRRLLGERVVLKLAHGREPVHIRVDPGQFDQVIINLAVNA RDAMPGGGQLTISTRREAVETEMNQGTEAVPPGDYVVIDVVDTGTGITRENLGRLFEPFFTTKSEGTAGAGTGLGLSTVY GIVRQTEGFIFVESTLGEGATFTIYLPRHEPPVEVAGAGAGGAEGGVGPGDGAPGGGGEEGGEARDLTGKETILLVEDED AVRVFGSRALRNKGYTVLEARSGEGALDVLEDGAEIDLLITDMVMPGMDGATLAGRVREARPDLKIILISGYSEDVIRGD IVNQPDTHFLPKPFSLKALAEKVREVLA
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=244, Percent_Identity=29.9180327868852, Blast_Score=104, Evalue=3e-23, Organism=Escherichia coli, GI1788549, Length=361, Percent_Identity=27.7008310249307, Blast_Score=102, Evalue=8e-23, Organism=Escherichia coli, GI1788713, Length=286, Percent_Identity=27.6223776223776, Blast_Score=83, Evalue=6e-17, Organism=Escherichia coli, GI145693157, Length=275, Percent_Identity=26.1818181818182, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1786600, Length=258, Percent_Identity=26.3565891472868, Blast_Score=71, Evalue=3e-13, Organism=Escherichia coli, GI1790300, Length=374, Percent_Identity=27.2727272727273, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 88384; Mature: 88253
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS50112 PAS ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAVLIREPALWGLGAGLGGALAGGLWSALGELPVAGWVAAIGATIALGSLAALLRRFA CCCCEEEECCCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH QWGEAAARGGAAAALLDIEDGPRLLIGADGGARYANSQARTLWGGHPPLAHLRQRLHGDM HHHHHHHCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCEECCCCCCHHHHHHHHCCCH MAADALGRLEEAARIGLREEVDLPLRDPEGYSGEPEWVRVMVAPGREPGSRLWSCRDVTA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHCCHHHHHH RRAIDEVLLREREELADFLYFLPVGLYSADTDGRLRYANQVFAQWLGRDTDAMVGLDIDA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCHHH VMEGPAPEPDGAWEGRLRFLPVDEPAFDAEVRQSTFDDAGQLRTRSVVVRLPAGEAAPTA HCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCHHHHEEEEEEEEECCCCCCCCCC GEGGWLRRRPWLFDGAPVGIVLTDPEGAITDCNASFLAMVGLEAADVFDRPLADLAARND CCCCCCCCCCCEECCCCEEEEEECCCCCEECCCCHHHHHHCCCHHHHHHCHHHHHHHCCC REDLRALVDKVVGGGTAQADIRLVRGEREVAVGVFLSPMTSLSGRPGDPPDGAVAHLIDT HHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEECCHHHCCCCCCCCCCCHHHHHHHC TEQKNLEQQFAQAQKMQAMGQLAGGVAHDFNNLLTAMIGFSDLLLQRHGIGDPSFADIMQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH IKQNANRAANLVRQLLAFSRRQPLRPRLLNVTDALSELSHLLRRLLGERVVLKLAHGREP HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCC VHIRVDPGQFDQVIINLAVNARDAMPGGGQLTISTRREAVETEMNQGTEAVPPGDYVVID EEEEECCCCCCEEEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCEEEEE VVDTGTGITRENLGRLFEPFFTTKSEGTAGAGTGLGLSTVYGIVRQTEGFIFVESTLGEG EEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCC ATFTIYLPRHEPPVEVAGAGAGGAEGGVGPGDGAPGGGGEEGGEARDLTGKETILLVEDE CEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC DAVRVFGSRALRNKGYTVLEARSGEGALDVLEDGAEIDLLITDMVMPGMDGATLAGRVRE CHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCCCEEEEEEHHHCCCCCCCHHHHHHHH ARPDLKIILISGYSEDVIRGDIVNQPDTHFLPKPFSLKALAEKVREVLA CCCCEEEEEEECCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC >Mature Secondary Structure SDAVLIREPALWGLGAGLGGALAGGLWSALGELPVAGWVAAIGATIALGSLAALLRRFA CCCEEEECCCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH QWGEAAARGGAAAALLDIEDGPRLLIGADGGARYANSQARTLWGGHPPLAHLRQRLHGDM HHHHHHHCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCEECCCCCCHHHHHHHHCCCH MAADALGRLEEAARIGLREEVDLPLRDPEGYSGEPEWVRVMVAPGREPGSRLWSCRDVTA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHCCHHHHHH RRAIDEVLLREREELADFLYFLPVGLYSADTDGRLRYANQVFAQWLGRDTDAMVGLDIDA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCHHH VMEGPAPEPDGAWEGRLRFLPVDEPAFDAEVRQSTFDDAGQLRTRSVVVRLPAGEAAPTA HCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCHHHHEEEEEEEEECCCCCCCCCC GEGGWLRRRPWLFDGAPVGIVLTDPEGAITDCNASFLAMVGLEAADVFDRPLADLAARND CCCCCCCCCCCEECCCCEEEEEECCCCCEECCCCHHHHHHCCCHHHHHHCHHHHHHHCCC REDLRALVDKVVGGGTAQADIRLVRGEREVAVGVFLSPMTSLSGRPGDPPDGAVAHLIDT HHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEECCHHHCCCCCCCCCCCHHHHHHHC TEQKNLEQQFAQAQKMQAMGQLAGGVAHDFNNLLTAMIGFSDLLLQRHGIGDPSFADIMQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH IKQNANRAANLVRQLLAFSRRQPLRPRLLNVTDALSELSHLLRRLLGERVVLKLAHGREP HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCC VHIRVDPGQFDQVIINLAVNARDAMPGGGQLTISTRREAVETEMNQGTEAVPPGDYVVID EEEEECCCCCCEEEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCEEEEE VVDTGTGITRENLGRLFEPFFTTKSEGTAGAGTGLGLSTVYGIVRQTEGFIFVESTLGEG EEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCC ATFTIYLPRHEPPVEVAGAGAGGAEGGVGPGDGAPGGGGEEGGEARDLTGKETILLVEDE CEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC DAVRVFGSRALRNKGYTVLEARSGEGALDVLEDGAEIDLLITDMVMPGMDGATLAGRVRE CHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCCCEEEEEEHHHCCCCCCCHHHHHHHH ARPDLKIILISGYSEDVIRGDIVNQPDTHFLPKPFSLKALAEKVREVLA CCCCEEEEEEECCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA