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The map label for this gene is recA

Identifier: 83594151

GI number: 83594151

Start: 3252155

End: 3253255

Strand: Reverse

Name: recA

Synonym: Rru_A2819

Alternate gene names: 83594151

Gene position: 3253255-3252155 (Counterclockwise)

Preceding gene: 83594152

Following gene: 83594150

Centisome position: 74.74

GC content: 63.58

Gene sequence:

>1101_bases
ATGTCGCAGAGCGTCTTGCGTCTGGTGGATAAGGATACGATGGACAAGCAAAAGGCTTTGGAAGCGGCTGTGGGCCAGAT
CGAGCGCGCCTTTGGCAAGGGCTCGATCATGAAACTCGGCCAGCGCGGCAGTGTCGTCGACATCGAGTCGATCAGCACCG
GATCCCTGGGCCTGGATATCGCCCTGGGCATCGGCGGTCTGCCGCGCGGGCGCATCGTCGAGATCTACGGGCCCGAAAGC
TCGGGCAAGACCACGCTCGCCCTGCATGTGGTGGCCGAGGCGCAGAAGAAGGGCGGTCAATGCGCCTTCGTCGACGCCGA
GCACGCCTTCGATCCGCTCTATGCCCGCAAGCTTGGCGTCAGCCTTGATGACCTGCTGGTGTCCCAGCCCGACACCGGCG
AACAGGCCCTGGAAATCGCCGATACCCTGGTGCGGTCGGGCGCCATCGATGTGCTGGTGATTGACTCGGTGGCGGCGCTG
GTGCCCAAGGCCGAACTGGAAGGCGATATGGGCGATTCCCATGTCGGCCTGCAGGCGCGGTTGATGAGCCAAGCCCTGCG
CAAGCTGACCGGCACGGTCTCGCGCTCCAACACCTTGATTATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGT
TCGGCAACCCCGAAACCACCACCGGCGGCAATGCGCTGAAGTTCTACGCCTCGGTCCGTCTCGACATCCGCCGCATCGGC
GCGGTGAAGGACAAGGAGGAGGTCGTCGGCAACCAGACGCGGGTCAAGGTGGTCAAGAACAAGGTCGCCCCGCCGTTCAA
GGTGGTCGAATTCGACATCATGTATGGCGAGGGCATCTCCAAGCTAGGCGAGATGCTCGACCTGGGGGTGAAGGCCAATA
TCATCGAGAAGTCGGGGGCGTGGTTCTCGTATAATTCCACCCGCATCGGCCAGGGCCGCGAGAACGCCAAGCAGTTCCTG
CGCGACAATCCGGCGATGGCCGAGGAAATCGAAAACGCCGTGCGCGCCAATGCCGGGCTGATCGCCGAGGAGATGATCGG
CGGTCCGGGCGGCGAGGATGACGACGCCGGTGGCGCCGCCGGAGTCGGCGACGAAGCCTGA

Upstream 100 bases:

>100_bases
TTGTTCTGTTCTATTTTGCCCCTTGAATGCGAGAACAAAAAGAGTACGTTTGAGCATGGTTGCGCGTGCGGGCGCGGCCA
TGGGATAACGGAGGCCCGAA

Downstream 100 bases:

>100_bases
CGCCCGCTTTTCGTGTTCTTCCCCCCGGTGGTGAACCGGGGGGAGGCGAAACGTCCCCCATCCAGGCCTTTCTTTCGCCT
TTTCCCCTTGTCGGAGGGGG

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MSQSVLRLVDKDTMDKQKALEAAVGQIERAFGKGSIMKLGQRGSVVDIESISTGSLGLDIALGIGGLPRGRIVEIYGPES
SGKTTLALHVVAEAQKKGGQCAFVDAEHAFDPLYARKLGVSLDDLLVSQPDTGEQALEIADTLVRSGAIDVLVIDSVAAL
VPKAELEGDMGDSHVGLQARLMSQALRKLTGTVSRSNTLIIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIG
AVKDKEEVVGNQTRVKVVKNKVAPPFKVVEFDIMYGEGISKLGEMLDLGVKANIIEKSGAWFSYNSTRIGQGRENAKQFL
RDNPAMAEEIENAVRANAGLIAEEMIGGPGGEDDDAGGAAGVGDEA

Sequences:

>Translated_366_residues
MSQSVLRLVDKDTMDKQKALEAAVGQIERAFGKGSIMKLGQRGSVVDIESISTGSLGLDIALGIGGLPRGRIVEIYGPES
SGKTTLALHVVAEAQKKGGQCAFVDAEHAFDPLYARKLGVSLDDLLVSQPDTGEQALEIADTLVRSGAIDVLVIDSVAAL
VPKAELEGDMGDSHVGLQARLMSQALRKLTGTVSRSNTLIIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIG
AVKDKEEVVGNQTRVKVVKNKVAPPFKVVEFDIMYGEGISKLGEMLDLGVKANIIEKSGAWFSYNSTRIGQGRENAKQFL
RDNPAMAEEIENAVRANAGLIAEEMIGGPGGEDDDAGGAAGVGDEA
>Mature_365_residues
SQSVLRLVDKDTMDKQKALEAAVGQIERAFGKGSIMKLGQRGSVVDIESISTGSLGLDIALGIGGLPRGRIVEIYGPESS
GKTTLALHVVAEAQKKGGQCAFVDAEHAFDPLYARKLGVSLDDLLVSQPDTGEQALEIADTLVRSGAIDVLVIDSVAALV
PKAELEGDMGDSHVGLQARLMSQALRKLTGTVSRSNTLIIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGA
VKDKEEVVGNQTRVKVVKNKVAPPFKVVEFDIMYGEGISKLGEMLDLGVKANIIEKSGAWFSYNSTRIGQGRENAKQFLR
DNPAMAEEIENAVRANAGLIAEEMIGGPGGEDDDAGGAAGVGDEA

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=321, Percent_Identity=72.8971962616822, Blast_Score=489, Evalue=1e-139,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_RHORT (Q2RQH9)

Other databases:

- EMBL:   CP000230
- RefSeq:   YP_427903.1
- ProteinModelPortal:   Q2RQH9
- SMR:   Q2RQH9
- STRING:   Q2RQH9
- GeneID:   3836259
- GenomeReviews:   CP000230_GR
- KEGG:   rru:Rru_A2819
- NMPDR:   fig|1085.1.peg.464
- eggNOG:   COG0468
- HOGENOM:   HBG339889
- OMA:   GRDNTIT
- PhylomeDB:   Q2RQH9
- ProtClustDB:   PRK09354
- BioCyc:   RRUB269796:RRU_A2819-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 38826; Mature: 38695

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSVLRLVDKDTMDKQKALEAAVGQIERAFGKGSIMKLGQRGSVVDIESISTGSLGLDI
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCCCCCEEE
ALGIGGLPRGRIVEIYGPESSGKTTLALHVVAEAQKKGGQCAFVDAEHAFDPLYARKLGV
EECCCCCCCCCEEEEECCCCCCCEEEEEEEEEHHHHCCCCEEEEEHHHHCCHHHHHHHCC
SLDDLLVSQPDTGEQALEIADTLVRSGAIDVLVIDSVAALVPKAELEGDMGDSHVGLQAR
CHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHCCHHHCCCCCCCCCCCHHHH
LMSQALRKLTGTVSRSNTLIIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIG
HHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHC
AVKDKEEVVGNQTRVKVVKNKVAPPFKVVEFDIMYGEGISKLGEMLDLGVKANIIEKSGA
CCCCHHHHHCCCHHHHHHHHCCCCCEEEEEEEEEECCCHHHHHHHHHCCCEEEEEECCCC
WFSYNSTRIGQGRENAKQFLRDNPAMAEEIENAVRANAGLIAEEMIGGPGGEDDDAGGAA
EEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCC
GVGDEA
CCCCCC
>Mature Secondary Structure 
SQSVLRLVDKDTMDKQKALEAAVGQIERAFGKGSIMKLGQRGSVVDIESISTGSLGLDI
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCCCCCEEE
ALGIGGLPRGRIVEIYGPESSGKTTLALHVVAEAQKKGGQCAFVDAEHAFDPLYARKLGV
EECCCCCCCCCEEEEECCCCCCCEEEEEEEEEHHHHCCCCEEEEEHHHHCCHHHHHHHCC
SLDDLLVSQPDTGEQALEIADTLVRSGAIDVLVIDSVAALVPKAELEGDMGDSHVGLQAR
CHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHCCHHHCCCCCCCCCCCHHHH
LMSQALRKLTGTVSRSNTLIIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIG
HHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHC
AVKDKEEVVGNQTRVKVVKNKVAPPFKVVEFDIMYGEGISKLGEMLDLGVKANIIEKSGA
CCCCHHHHHCCCHHHHHHHHCCCCCEEEEEEEEEECCCHHHHHHHHHCCCEEEEEECCCC
WFSYNSTRIGQGRENAKQFLRDNPAMAEEIENAVRANAGLIAEEMIGGPGGEDDDAGGAA
EEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCC
GVGDEA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA