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The map label for this gene is 83594073

Identifier: 83594073

GI number: 83594073

Start: 3173079

End: 3174146

Strand: Reverse

Name: 83594073

Synonym: Rru_A2741

Alternate gene names: NA

Gene position: 3174146-3173079 (Counterclockwise)

Preceding gene: 83594074

Following gene: 83594072

Centisome position: 72.92

GC content: 63.67

Gene sequence:

>1068_bases
ATGTTGACGGGACAACGGGTGTTAATCACCGGGGGGACGGGGTCTTTGGGGCGGGTTCTGGTGCGCCGTCTGCTATCGGG
CGAGATGGGAACGCCCGAGCGGGTGACCATCATGTCGCGCGACGAGGCTAAGCAGAACGCCCTGCGCACGTCTTATCTGG
TCTCGGCGGGTCGTCATCCGACCGACGAGATCATCTACGAGAATTTCCGGCGAACGCTCGCCTTTCAAATCGGCGATGTC
CGCGACCGCGACGCCGTGTCGCTGGCCCTGTCGGATGCGGATGTCGTGTTCAACGCCGCCGCCCTGAAACAGGTGCCGAC
CTGCGAATATTTCCCCTATGAGGCCATCCGCACCAATGTGGAGGGGCCGTGGAATATCATCACCACCATCCGCGATCGGC
GGCTGCCGGTGAAAACCGTGGTCGGCATCTCCACCGACAAGGCGGCCAAGCCGATCAATGTCATGGGCATGACCAAGGCC
CTGCAGGAACGGCTGTTCCTGTCGGCCAATCTTGGCTGCGGCCAAACGCGCTTCATCGCCGTGCGCTATGGCAATGTCCT
GGCCTCGCGGGGGTCGGTGGTGCCGTTGTTTCATCAGCAAATCGCCGCCGGCGGGCCGGTGACCCTGACCGATCCGGATA
TGACCCGCTTTTTGCTCAGCCTGAACGATGCGGTCGATCTGATCTTTTCGGCCTGTCGCACGGCCTTGCCTGGCGAGACC
TATGTGCCCCGCGTCGCTTCGGCGCGGGTTGAGGATATCGCCCTGGCGCTGATTGGCGAGCGCGCGATTCCCATCAAGAT
CATCGGCCTGCGGCCGGGCGAGAAATCCCACGAGATCATGGTGAGCGAGGAGGAGGCGCGGCGGACGATTGAGCGCGACG
GGCGCTATGTGATCCGGCCCATCCTGCCCGAACTGGCCGCCGGGAACATGGGCCCGCCGGCCCTTGACGAGGAATACACC
TCCGCCCAAGGGGTGCTCGACCGGGCGGGGGTGGAAGAGCTGTTTCGCCGCAATCGCTTGATGGTGGGCGATCTGGACCT
GGATGACGAGAAAGATCTGCTGCGATGA

Upstream 100 bases:

>100_bases
TAAAAAGCTGTTCTTCCTTCGCTTATCTATAGCAAAGAGCGAAGCGGCGACAAGGTTTTCAGGCCTGTGGTGGATCTTAC
CGGGGGAGTGGATTAAGCCG

Downstream 100 bases:

>100_bases
AAGTCATGACCATTCTGGGCACGCGCCCGGAACTGATCCGCTTGTCGCTGATCCTGCCCAGGCTTGATGCGGTGTGCGAC
CATGTTTTCGTCTATACCGG

Product: polysaccharide biosynthesis protein CapD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MLTGQRVLITGGTGSLGRVLVRRLLSGEMGTPERVTIMSRDEAKQNALRTSYLVSAGRHPTDEIIYENFRRTLAFQIGDV
RDRDAVSLALSDADVVFNAAALKQVPTCEYFPYEAIRTNVEGPWNIITTIRDRRLPVKTVVGISTDKAAKPINVMGMTKA
LQERLFLSANLGCGQTRFIAVRYGNVLASRGSVVPLFHQQIAAGGPVTLTDPDMTRFLLSLNDAVDLIFSACRTALPGET
YVPRVASARVEDIALALIGERAIPIKIIGLRPGEKSHEIMVSEEEARRTIERDGRYVIRPILPELAAGNMGPPALDEEYT
SAQGVLDRAGVEELFRRNRLMVGDLDLDDEKDLLR

Sequences:

>Translated_355_residues
MLTGQRVLITGGTGSLGRVLVRRLLSGEMGTPERVTIMSRDEAKQNALRTSYLVSAGRHPTDEIIYENFRRTLAFQIGDV
RDRDAVSLALSDADVVFNAAALKQVPTCEYFPYEAIRTNVEGPWNIITTIRDRRLPVKTVVGISTDKAAKPINVMGMTKA
LQERLFLSANLGCGQTRFIAVRYGNVLASRGSVVPLFHQQIAAGGPVTLTDPDMTRFLLSLNDAVDLIFSACRTALPGET
YVPRVASARVEDIALALIGERAIPIKIIGLRPGEKSHEIMVSEEEARRTIERDGRYVIRPILPELAAGNMGPPALDEEYT
SAQGVLDRAGVEELFRRNRLMVGDLDLDDEKDLLR
>Mature_355_residues
MLTGQRVLITGGTGSLGRVLVRRLLSGEMGTPERVTIMSRDEAKQNALRTSYLVSAGRHPTDEIIYENFRRTLAFQIGDV
RDRDAVSLALSDADVVFNAAALKQVPTCEYFPYEAIRTNVEGPWNIITTIRDRRLPVKTVVGISTDKAAKPINVMGMTKA
LQERLFLSANLGCGQTRFIAVRYGNVLASRGSVVPLFHQQIAAGGPVTLTDPDMTRFLLSLNDAVDLIFSACRTALPGET
YVPRVASARVEDIALALIGERAIPIKIIGLRPGEKSHEIMVSEEEARRTIERDGRYVIRPILPELAAGNMGPPALDEEYT
SAQGVLDRAGVEELFRRNRLMVGDLDLDDEKDLLR

Specific function: Unknown

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869 [H]

Pfam domain/function: PF02719 Polysacc_synt_2 [H]

EC number: NA

Molecular weight: Translated: 39087; Mature: 39087

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTGQRVLITGGTGSLGRVLVRRLLSGEMGTPERVTIMSRDEAKQNALRTSYLVSAGRHP
CCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCC
TDEIIYENFRRTLAFQIGDVRDRDAVSLALSDADVVFNAAALKQVPTCEYFPYEAIRTNV
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHCCC
EGPWNIITTIRDRRLPVKTVVGISTDKAAKPINVMGMTKALQERLFLSANLGCGQTRFIA
CCCCEEEEEHHCCCCCCHHEEECCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCEEEEE
VRYGNVLASRGSVVPLFHQQIAAGGPVTLTDPDMTRFLLSLNDAVDLIFSACRTALPGET
EEECCCHHCCCCEEHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
YVPRVASARVEDIALALIGERAIPIKIIGLRPGEKSHEIMVSEEEARRTIERDGRYVIRP
CCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHCCCEEEEH
ILPELAAGNMGPPALDEEYTSAQGVLDRAGVEELFRRNRLMVGDLDLDDEKDLLR
HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCEEEECCCCCCCHHHCC
>Mature Secondary Structure
MLTGQRVLITGGTGSLGRVLVRRLLSGEMGTPERVTIMSRDEAKQNALRTSYLVSAGRHP
CCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCC
TDEIIYENFRRTLAFQIGDVRDRDAVSLALSDADVVFNAAALKQVPTCEYFPYEAIRTNV
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHCCC
EGPWNIITTIRDRRLPVKTVVGISTDKAAKPINVMGMTKALQERLFLSANLGCGQTRFIA
CCCCEEEEEHHCCCCCCHHEEECCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCEEEEE
VRYGNVLASRGSVVPLFHQQIAAGGPVTLTDPDMTRFLLSLNDAVDLIFSACRTALPGET
EEECCCHHCCCCEEHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
YVPRVASARVEDIALALIGERAIPIKIIGLRPGEKSHEIMVSEEEARRTIERDGRYVIRP
CCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHCCCEEEEH
ILPELAAGNMGPPALDEEYTSAQGVLDRAGVEELFRRNRLMVGDLDLDDEKDLLR
HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCEEEECCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]