| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594074
Identifier: 83594074
GI number: 83594074
Start: 3174279
End: 3175823
Strand: Reverse
Name: 83594074
Synonym: Rru_A2742
Alternate gene names: NA
Gene position: 3175823-3174279 (Counterclockwise)
Preceding gene: 83594075
Following gene: 83594073
Centisome position: 72.96
GC content: 68.93
Gene sequence:
>1545_bases ATGGCCGGGGATATCGACGACCTGACCCACCTTGGCCCGCTTCTGGCGAGCGAAGGGGTTGATCGGCGGATAACCGTCAA TCTTATGGCGGCCAAGGCCTTTCTCGCCGAGGGACGGCCCGATCAGGCGCTGATCTGCGCCGAGCGGCTGTTCCGCCTGT CGGGCTGGCAACCCGCCGTTGCCCCGGTGCTGCTATCGATTCTTGATGGGATGGGGGCGGTGGCGCGGGCGACCGAGGTT CGCAAGATCGCCTGTCTCTCGGCCTGCAAAGCCGGCGATTTCGCCCTGGTCCGCCGGCTTTACCTGGACTGGCGCTATCA CCACGTCGCCGTGCTGGGGCGGGAGGTTTTCGATGCCGACCCTTGCGTGATCGAGGGGCTTGACCGCCTGGCCGAGCGCC TGCGCCCCCCGGGGGAAACGCCGGGCGGCGGGAGAGCGCCGCGCCAGACGCCGCGTGTTCTTTATGTGCTGTCGAGCGTC ACCCAGGAAGGGTCGGTTCTGGCCAAGCTGATGGCCGGTCTGCTGACCCATCATGACGCCAGCCGCTGCGAGGTCGGCGT GGCGATCGCCGACGCCGACCAGCGCGCCTTTGAGGAGTCGGCCGAGGGGCGGCAGGTGAGGACCGTGGCCACCCTGCGCG GTTGGACGACCTTTGTCGCCTCCGAAGCCGGGATCGAGGCGCGGCTGCGCGCCCTGCGCGCCCGCGTCATCGACTGGGCG CCCGATCTTCTGGTGACCAATGCCGCCCTGGCTCAGCCCGAGGCCTATCTTCTGGTGCGATCCCTGGATATCCCCTGGGT CGCCCAGGTGGTGGGGCCGCCGGCCCAGTTCACCGCCCCCGGAGCGGTGTTCAATATCGCCTCCGACGAGCGCCTGCTGA TGGACTGCCCGGGATCGGGGACCATCGTTCGGGTCGAGGTGGATCTGCCCGATGACCAAAAGGTCACCCCCTTGGCCCGG ACGGCGCTTGGCATTCCCGAGGGCGCGCCGGTGCTCTGTGGCGCCGGTCGGCCGGTGAAGTTCAGCCCCCGCTATCTGGC GGTGGTCGCCGAGGTTCTGCGCAAGGTTCCGACAAGCTGGTTTCTGGCGCTTGGGGTGGGGCGCGAGGGGCTCGCCGCCC TGCCCGAGGATGTGGCCGGGCGGGTGGTGGCCTTGCCCTGGACCCGCGATTACCTGGGCGCCCTGGCGCTTGGCGATCTG ATGATCGACACCTTTCCCTCGGGCGGCGGGGTGACGGTGATGGACGCCATGGCGCTGTCGATCCCGGTGCTGGTGATGGG CCATGACCTTTGGCGGGAATACCGCTCCGATCAGTGGTCGGTGGCCCATGAATTCGCCTTGCCCGATTTGGTGATCGCCG CCGATGACGACGGCGCCCTGGCGGCGAGGGCGGTGGAGATTTTGGGCGATGCCCTGACCCTGGGGGTGATGGGGGCCCGG GCCCGCCCCCGCGTCGTCGCCCGGCGCGGTGATGTGGCGCGCATGACCAAGCGCTTCGAAGACGCCTATCGGGGCGTTCT AGATCTTCTTTCCCCCCGGGTTTGA
Upstream 100 bases:
>100_bases CTTCTGCGGCCAATGCCCGGACTGGGCCTCGACGCGCTGGCCCAAGCAGGGACGGTCCTATGCCGATATGGTCCAGGACT TCAAGGAAACGGAATAGGCC
Downstream 100 bases:
>100_bases TCGCTCTTTTAAAAAGCGGCGAGGCGCCACCCTAAAAAGCTGTTCTTCCTTCGCTTATCTATAGCAAAGAGCGAAGCGGC GACAAGGTTTTCAGGCCTGT
Product: O-linked N-acetylglucosamine transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MAGDIDDLTHLGPLLASEGVDRRITVNLMAAKAFLAEGRPDQALICAERLFRLSGWQPAVAPVLLSILDGMGAVARATEV RKIACLSACKAGDFALVRRLYLDWRYHHVAVLGREVFDADPCVIEGLDRLAERLRPPGETPGGGRAPRQTPRVLYVLSSV TQEGSVLAKLMAGLLTHHDASRCEVGVAIADADQRAFEESAEGRQVRTVATLRGWTTFVASEAGIEARLRALRARVIDWA PDLLVTNAALAQPEAYLLVRSLDIPWVAQVVGPPAQFTAPGAVFNIASDERLLMDCPGSGTIVRVEVDLPDDQKVTPLAR TALGIPEGAPVLCGAGRPVKFSPRYLAVVAEVLRKVPTSWFLALGVGREGLAALPEDVAGRVVALPWTRDYLGALALGDL MIDTFPSGGGVTVMDAMALSIPVLVMGHDLWREYRSDQWSVAHEFALPDLVIAADDDGALAARAVEILGDALTLGVMGAR ARPRVVARRGDVARMTKRFEDAYRGVLDLLSPRV
Sequences:
>Translated_514_residues MAGDIDDLTHLGPLLASEGVDRRITVNLMAAKAFLAEGRPDQALICAERLFRLSGWQPAVAPVLLSILDGMGAVARATEV RKIACLSACKAGDFALVRRLYLDWRYHHVAVLGREVFDADPCVIEGLDRLAERLRPPGETPGGGRAPRQTPRVLYVLSSV TQEGSVLAKLMAGLLTHHDASRCEVGVAIADADQRAFEESAEGRQVRTVATLRGWTTFVASEAGIEARLRALRARVIDWA PDLLVTNAALAQPEAYLLVRSLDIPWVAQVVGPPAQFTAPGAVFNIASDERLLMDCPGSGTIVRVEVDLPDDQKVTPLAR TALGIPEGAPVLCGAGRPVKFSPRYLAVVAEVLRKVPTSWFLALGVGREGLAALPEDVAGRVVALPWTRDYLGALALGDL MIDTFPSGGGVTVMDAMALSIPVLVMGHDLWREYRSDQWSVAHEFALPDLVIAADDDGALAARAVEILGDALTLGVMGAR ARPRVVARRGDVARMTKRFEDAYRGVLDLLSPRV >Mature_513_residues AGDIDDLTHLGPLLASEGVDRRITVNLMAAKAFLAEGRPDQALICAERLFRLSGWQPAVAPVLLSILDGMGAVARATEVR KIACLSACKAGDFALVRRLYLDWRYHHVAVLGREVFDADPCVIEGLDRLAERLRPPGETPGGGRAPRQTPRVLYVLSSVT QEGSVLAKLMAGLLTHHDASRCEVGVAIADADQRAFEESAEGRQVRTVATLRGWTTFVASEAGIEARLRALRARVIDWAP DLLVTNAALAQPEAYLLVRSLDIPWVAQVVGPPAQFTAPGAVFNIASDERLLMDCPGSGTIVRVEVDLPDDQKVTPLART ALGIPEGAPVLCGAGRPVKFSPRYLAVVAEVLRKVPTSWFLALGVGREGLAALPEDVAGRVVALPWTRDYLGALALGDLM IDTFPSGGGVTVMDAMALSIPVLVMGHDLWREYRSDQWSVAHEFALPDLVIAADDDGALAARAVEILGDALTLGVMGARA RPRVVARRGDVARMTKRFEDAYRGVLDLLSPRV
Specific function: Unknown
COG id: COG3914
COG function: function code O; Predicted O-linked N-acetylglucosamine transferase, SPINDLY family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55193; Mature: 55062
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGDIDDLTHLGPLLASEGVDRRITVNLMAAKAFLAEGRPDQALICAERLFRLSGWQPAV CCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHH APVLLSILDGMGAVARATEVRKIACLSACKAGDFALVRRLYLDWRYHHVAVLGREVFDAD HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC PCVIEGLDRLAERLRPPGETPGGGRAPRQTPRVLYVLSSVTQEGSVLAKLMAGLLTHHDA CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCC SRCEVGVAIADADQRAFEESAEGRQVRTVATLRGWTTFVASEAGIEARLRALRARVIDWA CCCEEEEEEECCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC PDLLVTNAALAQPEAYLLVRSLDIPWVAQVVGPPAQFTAPGAVFNIASDERLLMDCPGSG CHHHHHHHHHCCCCEEEEEEECCCCHHHHHCCCCCCCCCCCEEEEECCCCEEEEECCCCC TIVRVEVDLPDDQKVTPLARTALGIPEGAPVLCGAGRPVKFSPRYLAVVAEVLRKVPTSW EEEEEEEECCCCCCCCHHHHHHCCCCCCCCEEECCCCCCEECCHHHHHHHHHHHHCCCCE FLALGVGREGLAALPEDVAGRVVALPWTRDYLGALALGDLMIDTFPSGGGVTVMDAMALS EEEECCCCCCHHCCCHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH IPVLVMGHDLWREYRSDQWSVAHEFALPDLVIAADDDGALAARAVEILGDALTLGVMGAR CCHHEECHHHHHHHCCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC ARPRVVARRGDVARMTKRFEDAYRGVLDLLSPRV CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AGDIDDLTHLGPLLASEGVDRRITVNLMAAKAFLAEGRPDQALICAERLFRLSGWQPAV CCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHH APVLLSILDGMGAVARATEVRKIACLSACKAGDFALVRRLYLDWRYHHVAVLGREVFDAD HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC PCVIEGLDRLAERLRPPGETPGGGRAPRQTPRVLYVLSSVTQEGSVLAKLMAGLLTHHDA CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCC SRCEVGVAIADADQRAFEESAEGRQVRTVATLRGWTTFVASEAGIEARLRALRARVIDWA CCCEEEEEEECCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC PDLLVTNAALAQPEAYLLVRSLDIPWVAQVVGPPAQFTAPGAVFNIASDERLLMDCPGSG CHHHHHHHHHCCCCEEEEEEECCCCHHHHHCCCCCCCCCCCEEEEECCCCEEEEECCCCC TIVRVEVDLPDDQKVTPLARTALGIPEGAPVLCGAGRPVKFSPRYLAVVAEVLRKVPTSW EEEEEEEECCCCCCCCHHHHHHCCCCCCCCEEECCCCCCEECCHHHHHHHHHHHHCCCCE FLALGVGREGLAALPEDVAGRVVALPWTRDYLGALALGDLMIDTFPSGGGVTVMDAMALS EEEECCCCCCHHCCCHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH IPVLVMGHDLWREYRSDQWSVAHEFALPDLVIAADDDGALAARAVEILGDALTLGVMGAR CCHHEECHHHHHHHCCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC ARPRVVARRGDVARMTKRFEDAYRGVLDLLSPRV CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA