| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is wecB [H]
Identifier: 83594072
GI number: 83594072
Start: 3171985
End: 3173082
Strand: Reverse
Name: wecB [H]
Synonym: Rru_A2740
Alternate gene names: 83594072
Gene position: 3173082-3171985 (Counterclockwise)
Preceding gene: 83594073
Following gene: 83594071
Centisome position: 72.9
GC content: 65.66
Gene sequence:
>1098_bases ATGAAAGTCATGACCATTCTGGGCACGCGCCCGGAACTGATCCGCTTGTCGCTGATCCTGCCCAGGCTTGATGCGGTGTG CGACCATGTTTTCGTCTATACCGGGCAGAACGCCCATCCCAGCCTGTGGCGAAATTTCCTGGGCGAGTTTTCCCTGCGCT CCGAAGATCACGACCTGGGCGCCAGCCAGGGCACCCTGGGCGAGCGGGTGGGGGCCATCCTTGCCGGGGCGGAACGGGTG ATCGGTCTGGAACGCCCCGACCGGGTGCTGATCCTTGGCGATACCAACAGCGGTCTGTCGGCCTATGTCGCCAAGCGCCT GGGCATCCCGGTTTTTCATATGGAGGCGGGAAACCGCTGCCATGACGACCGGGTGCCCGAAGAGGTCAACCGCCGGGTCA TCGATCATTGCTCCGATCTTTTGATGCCCTATACCGAGCATGGTCGGCGCAATCTGCTGGCCGAGGGCATCCCCGGCCAG CGCATCGTGGTCACCGGCAATCCCATCGGCGAGGTGCTGGCGGCGATGGCCGAGCGCATCGACGCCGCGACCGCGCTGGG TGCCCTGGGGCTGCGGCCCGGCGCGTATCTGCTGTTCACCTTCCACCGTCAGGAAAACGTCGATGTTCCCCAGCGCCTAA TGGCCCTGATGGCCGGGGTGCGGCGGGTGATGGCGGTAAGCGGCCTGCCCGCCGTGGTCAGTGTCCATCCGCGCACCCGC GCCCATCTCGAGGCGAGCGGTTTGGCCGACCAGGGGCGCGGCGATCTGATGTTGATGGAGCCCTTTGGCTTCTGCGATTT CGTCGCCCTGGAAAAATCCGCCCGCTGCGTGCTGAGCGATAGCGGCACGGTGCAGGAGGAGGGGGCGATCCTTGGTGTGC CGACGGTGACGCTGCGCGATGTCACCGAACGGCCCGAGACCCTGGAGACCGGCAGCAATATCCTATGCGGCGTTGATCCC GAAGCGATGGAGCGGGCCTTTCGCCTGGTGACCGCGACACCACCCAATTGGCCGGTTCCGTTGGACTATACCCGCATGAA CGTGGCCGACACCGTGGTCCGGCTGCTGATCGGCGCCAGCCTGCCGGTGGGGCGATGA
Upstream 100 bases:
>100_bases CCCAAGGGGTGCTCGACCGGGCGGGGGTGGAAGAGCTGTTTCGCCGCAATCGCTTGATGGTGGGCGATCTGGACCTGGAT GACGAGAAAGATCTGCTGCG
Downstream 100 bases:
>100_bases GCGCCATGGACGCCGAAGACTCTCCGTTCACCGCCCTGGGCGATGAGGCCTGGGAGGCGGGATCCTGGCGCAAGGCCGCC TTGTTCTATGGCCGGGCGCT
Product: UDP-N-acetylglucosamine 2-epimerase
Products: NA
Alternate protein names: UDP-GlcNAc-2-epimerase [H]
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MKVMTILGTRPELIRLSLILPRLDAVCDHVFVYTGQNAHPSLWRNFLGEFSLRSEDHDLGASQGTLGERVGAILAGAERV IGLERPDRVLILGDTNSGLSAYVAKRLGIPVFHMEAGNRCHDDRVPEEVNRRVIDHCSDLLMPYTEHGRRNLLAEGIPGQ RIVVTGNPIGEVLAAMAERIDAATALGALGLRPGAYLLFTFHRQENVDVPQRLMALMAGVRRVMAVSGLPAVVSVHPRTR AHLEASGLADQGRGDLMLMEPFGFCDFVALEKSARCVLSDSGTVQEEGAILGVPTVTLRDVTERPETLETGSNILCGVDP EAMERAFRLVTATPPNWPVPLDYTRMNVADTVVRLLIGASLPVGR
Sequences:
>Translated_365_residues MKVMTILGTRPELIRLSLILPRLDAVCDHVFVYTGQNAHPSLWRNFLGEFSLRSEDHDLGASQGTLGERVGAILAGAERV IGLERPDRVLILGDTNSGLSAYVAKRLGIPVFHMEAGNRCHDDRVPEEVNRRVIDHCSDLLMPYTEHGRRNLLAEGIPGQ RIVVTGNPIGEVLAAMAERIDAATALGALGLRPGAYLLFTFHRQENVDVPQRLMALMAGVRRVMAVSGLPAVVSVHPRTR AHLEASGLADQGRGDLMLMEPFGFCDFVALEKSARCVLSDSGTVQEEGAILGVPTVTLRDVTERPETLETGSNILCGVDP EAMERAFRLVTATPPNWPVPLDYTRMNVADTVVRLLIGASLPVGR >Mature_365_residues MKVMTILGTRPELIRLSLILPRLDAVCDHVFVYTGQNAHPSLWRNFLGEFSLRSEDHDLGASQGTLGERVGAILAGAERV IGLERPDRVLILGDTNSGLSAYVAKRLGIPVFHMEAGNRCHDDRVPEEVNRRVIDHCSDLLMPYTEHGRRNLLAEGIPGQ RIVVTGNPIGEVLAAMAERIDAATALGALGLRPGAYLLFTFHRQENVDVPQRLMALMAGVRRVMAVSGLPAVVSVHPRTR AHLEASGLADQGRGDLMLMEPFGFCDFVALEKSARCVLSDSGTVQEEGAILGVPTVTLRDVTERPETLETGSNILCGVDP EAMERAFRLVTATPPNWPVPLDYTRMNVADTVVRLLIGASLPVGR
Specific function: Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) to produce UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues [H]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=354, Percent_Identity=31.0734463276836, Blast_Score=110, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: =5.1.3.14 [H]
Molecular weight: Translated: 39686; Mature: 39686
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVMTILGTRPELIRLSLILPRLDAVCDHVFVYTGQNAHPSLWRNFLGEFSLRSEDHDLG CEEEEEECCCCHHEEHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCC ASQGTLGERVGAILAGAERVIGLERPDRVLILGDTNSGLSAYVAKRLGIPVFHMEAGNRC CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEECCCCCC HDDRVPEEVNRRVIDHCSDLLMPYTEHGRRNLLAEGIPGQRIVVTGNPIGEVLAAMAERI CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH DAATALGALGLRPGAYLLFTFHRQENVDVPQRLMALMAGVRRVMAVSGLPAVVSVHPRTR HHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHH AHLEASGLADQGRGDLMLMEPFGFCDFVALEKSARCVLSDSGTVQEEGAILGVPTVTLRD HHEECCCCCCCCCCCEEEECCCCCHHHHHHCCCCCEEECCCCCCCCCCCEEECCCEEEHH VTERPETLETGSNILCGVDPEAMERAFRLVTATPPNWPVPLDYTRMNVADTVVRLLIGAS HHCCCCHHHCCCCEEECCCHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCC LPVGR CCCCC >Mature Secondary Structure MKVMTILGTRPELIRLSLILPRLDAVCDHVFVYTGQNAHPSLWRNFLGEFSLRSEDHDLG CEEEEEECCCCHHEEHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCC ASQGTLGERVGAILAGAERVIGLERPDRVLILGDTNSGLSAYVAKRLGIPVFHMEAGNRC CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEECCCCCC HDDRVPEEVNRRVIDHCSDLLMPYTEHGRRNLLAEGIPGQRIVVTGNPIGEVLAAMAERI CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH DAATALGALGLRPGAYLLFTFHRQENVDVPQRLMALMAGVRRVMAVSGLPAVVSVHPRTR HHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHH AHLEASGLADQGRGDLMLMEPFGFCDFVALEKSARCVLSDSGTVQEEGAILGVPTVTLRD HHEECCCCCCCCCCCEEEECCCCCHHHHHHCCCCCEEECCCCCCCCCCCEEECCCEEEHH VTERPETLETGSNILCGVDPEAMERAFRLVTATPPNWPVPLDYTRMNVADTVVRLLIGAS HHCCCCHHHCCCCEEECCCHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCC LPVGR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]