| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594071
Identifier: 83594071
GI number: 83594071
Start: 3169526
End: 3171988
Strand: Reverse
Name: 83594071
Synonym: Rru_A2739
Alternate gene names: NA
Gene position: 3171988-3169526 (Counterclockwise)
Preceding gene: 83594072
Following gene: 83594070
Centisome position: 72.87
GC content: 70.36
Gene sequence:
>2463_bases ATGAGCGCCATGGACGCCGAAGACTCTCCGTTCACCGCCCTGGGCGATGAGGCCTGGGAGGCGGGATCCTGGCGCAAGGC CGCCTTGTTCTATGGCCGGGCGCTCGACGGCGGCGAGGTCGGGCCGCCGATCACGGCGCGGCTGATTTTTCGCCAGATGG TGGCCGAGGCGAACAGCGGGGCGATCTTGCCGGCTTTGCGCGCCTTGCGCGCCCTTTTGGCCCTGCCGATCGAGGAGTGG CCGTCCGACGTGCGCAGCCAGCTGCCCACGGCCGAGGCGGCCCTTCTTCATAGGGCCGGCCAGCCCGAGGAGGCCGATCG CGCCGCCCAAAGCTATGGTCCGGTGGCCTTGGCAAGCGGCTATACCAGCGGCTCGGCCATGTTGCGCTTCGGGGCGGCTT TTCAGGCGGCCGTGGCCCGCCCGCCGGGGCGGTTGGATCTGCGCTGGCTGTTGCCAGCCCTGCCGCCGCCGCCTTCGCAG GGGGGAGCGGCGGGGGTTTTGCTGATCGCCTGTGACAGCGCCTATTTCGAACGCTATGGCCCGGCGGCCTGGACGGCTTT GCGCCGCCAGGACGCGGGGAACACGTTGCTCCATGTGCATCTTTGCGCCCCGACGCCGGCGGCCCAGCGCTTGGCCCTCG CCCTGGCCAAGGCCGATCCATTGCTGCGCTTCACCACCTCGCCCTTGCCCGGCGGGCTGGCGGCGGGCGAGCCCACCTTG GTTTATTACACCTGCCTGCGCTTTCTGGTGCTGCCGGCTCTTCAGCAGGCCTACCAGCGGCCGATCCTCATAACCGATGC TGATCTGCTGGCGGTCGCCCCCCTTGATGACCTATGGCGGGCGGTTGAAGGCAAGGCGGCGGCGCTGATCGCCTTTCCCA AGCTGCGGATGAACCTGTGGGCGTGGCTGACCGCCTCGGTCGTGGTGGTGCCCTTTGAGGGCGCCGGCCAGCGCTTCGCC ACCCTCCTTCGCGCCTATATCGAGGCGCAGATCGCCCGCGGTTTGCTGCTCTGGCACCTTGATCAGGCGGCCCTGGCGGC GGTGACGCTGAATGGCGGTCTGGAGATCGGTTTCCTGGCGCCCGAGGTGATGGACGCGGCGCCCTGGGGCCCCGAGGATG GCGGGAACGCCGCCGAAGGCTCCCGTCACCCCGCCGGTACGGCCGTTTTCTGGTCGATCACCGGCTCGCGAGCCGAACAT GTCCATAAGCTAGATAGCGCCGTCTTTCGCGATCTCGATCGCCGTCCGCCCCCGGTCGCCGCCGACCGGCCGTTGGTGGT GTTGTCACCGGCCGTTCCCCCCGATCCGATGGGGCAGGCGGCGGTTCTCGGGCGGCTGCTTGACGGACGGCCCGCCCTGG CCCTGCGCTTCGTCACGGCGGGTCTGCCGGCCCAACCAACGCAGGCCGACGGGGCGGTCTGGACCTTTCAGACAACCCGC CCCCCCGCCGGATGGGTCGAGGCTCTGGGCGCGGGGGAGGCGGCGGCGGCCGGCTATGAGGGCTTCGTCGCGGCGCGGGC CGCCGAGATCCTCGCCCTGGTTGGCGCCGATCGCCCGTGCGCGCTGCTGGCCTGCACCGCCGATCCCCTTGACCTGCCCG CCGCCACCTTGGTCGCCCGCGCCTTGGGCATTCCCTTGGTGGTCTATCTGTTTGATGATCCGGTCTTCCAGTGGCCCGAC AGCATGGCGGTGGTGCGGGCCGGCGCCGAGCGCTGGGCCAGGGTCTGGACCCGGGAGGCGGCCGAGATTATCGCGCCCAA TCCCTTGCTCGCCGATGGCATCGCCGCGCGCTATGGCCGGCGGCCGATCGTCGTGCTCAATGGATCGCTCACCCCGCTCA ACCGAGAGCCCCCTCCGCCTTGGCCGGCGCCACCGGCCGCCTTGTCGCTGGTGTTCACCGGATCGATCTATCACGCCCAG GCCGATGCCCTGGGGCGGGTGGTCGCCGCCCTCGACCGTCTGGCCGGGCGCTGGCAATTGCATCTTTATACCCCTCAAGA CACGGCGACGCTGCGGGGCCTGGGATTGACCGGGCCCCATGTCTTCCCCCACGCGGCGGTGACGGCCCAGGCCGTGGTGC CGATCCAGCGCGCCGCCGAGGCCCTAGTGCTGCCTTTGGCCTTCACCAGCGGCGTGCCCGAGGTGGTGCGGACGGCGGCG CCGGGGAAGCTGGGCGATTATCTGATGTCCGGCCGCCCGATCCTGGTCCATGCCCCGGCCGATAGCTACGCCGCCCGGCT GTTCGCCGAGGAAGGCTGCGGGGCGGTGGTCGGCATAGCCGATGTCGACCGTTTGGTGGAGACCTTGACGCGGCTTGATC GCGATGAGGTCTGGCGCCAAAGCCTGATCGACGCGGCGCGGCGGGTGGCGCCGTCCTATGGCATGGATGTGGCGCGCTGT GTTTTCTGGGAGCGGATGGATCGTCTGCTGGCCGAGTCATCGCTTGGGGAGGGGGGGCAATGA
Upstream 100 bases:
>100_bases CGACACCACCCAATTGGCCGGTTCCGTTGGACTATACCCGCATGAACGTGGCCGACACCGTGGTCCGGCTGCTGATCGGC GCCAGCCTGCCGGTGGGGCG
Downstream 100 bases:
>100_bases ACGGATCCTTGCCGCGGCTTTTGATTATCGACACCTTGAAGCCCGTGGAACGCTCGTTCATGCGCGACCTGATCGCGCCG CTCGATCGCGATTTCGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 820; Mature: 819
Protein sequence:
>820_residues MSAMDAEDSPFTALGDEAWEAGSWRKAALFYGRALDGGEVGPPITARLIFRQMVAEANSGAILPALRALRALLALPIEEW PSDVRSQLPTAEAALLHRAGQPEEADRAAQSYGPVALASGYTSGSAMLRFGAAFQAAVARPPGRLDLRWLLPALPPPPSQ GGAAGVLLIACDSAYFERYGPAAWTALRRQDAGNTLLHVHLCAPTPAAQRLALALAKADPLLRFTTSPLPGGLAAGEPTL VYYTCLRFLVLPALQQAYQRPILITDADLLAVAPLDDLWRAVEGKAAALIAFPKLRMNLWAWLTASVVVVPFEGAGQRFA TLLRAYIEAQIARGLLLWHLDQAALAAVTLNGGLEIGFLAPEVMDAAPWGPEDGGNAAEGSRHPAGTAVFWSITGSRAEH VHKLDSAVFRDLDRRPPPVAADRPLVVLSPAVPPDPMGQAAVLGRLLDGRPALALRFVTAGLPAQPTQADGAVWTFQTTR PPAGWVEALGAGEAAAAGYEGFVAARAAEILALVGADRPCALLACTADPLDLPAATLVARALGIPLVVYLFDDPVFQWPD SMAVVRAGAERWARVWTREAAEIIAPNPLLADGIAARYGRRPIVVLNGSLTPLNREPPPPWPAPPAALSLVFTGSIYHAQ ADALGRVVAALDRLAGRWQLHLYTPQDTATLRGLGLTGPHVFPHAAVTAQAVVPIQRAAEALVLPLAFTSGVPEVVRTAA PGKLGDYLMSGRPILVHAPADSYAARLFAEEGCGAVVGIADVDRLVETLTRLDRDEVWRQSLIDAARRVAPSYGMDVARC VFWERMDRLLAESSLGEGGQ
Sequences:
>Translated_820_residues MSAMDAEDSPFTALGDEAWEAGSWRKAALFYGRALDGGEVGPPITARLIFRQMVAEANSGAILPALRALRALLALPIEEW PSDVRSQLPTAEAALLHRAGQPEEADRAAQSYGPVALASGYTSGSAMLRFGAAFQAAVARPPGRLDLRWLLPALPPPPSQ GGAAGVLLIACDSAYFERYGPAAWTALRRQDAGNTLLHVHLCAPTPAAQRLALALAKADPLLRFTTSPLPGGLAAGEPTL VYYTCLRFLVLPALQQAYQRPILITDADLLAVAPLDDLWRAVEGKAAALIAFPKLRMNLWAWLTASVVVVPFEGAGQRFA TLLRAYIEAQIARGLLLWHLDQAALAAVTLNGGLEIGFLAPEVMDAAPWGPEDGGNAAEGSRHPAGTAVFWSITGSRAEH VHKLDSAVFRDLDRRPPPVAADRPLVVLSPAVPPDPMGQAAVLGRLLDGRPALALRFVTAGLPAQPTQADGAVWTFQTTR PPAGWVEALGAGEAAAAGYEGFVAARAAEILALVGADRPCALLACTADPLDLPAATLVARALGIPLVVYLFDDPVFQWPD SMAVVRAGAERWARVWTREAAEIIAPNPLLADGIAARYGRRPIVVLNGSLTPLNREPPPPWPAPPAALSLVFTGSIYHAQ ADALGRVVAALDRLAGRWQLHLYTPQDTATLRGLGLTGPHVFPHAAVTAQAVVPIQRAAEALVLPLAFTSGVPEVVRTAA PGKLGDYLMSGRPILVHAPADSYAARLFAEEGCGAVVGIADVDRLVETLTRLDRDEVWRQSLIDAARRVAPSYGMDVARC VFWERMDRLLAESSLGEGGQ >Mature_819_residues SAMDAEDSPFTALGDEAWEAGSWRKAALFYGRALDGGEVGPPITARLIFRQMVAEANSGAILPALRALRALLALPIEEWP SDVRSQLPTAEAALLHRAGQPEEADRAAQSYGPVALASGYTSGSAMLRFGAAFQAAVARPPGRLDLRWLLPALPPPPSQG GAAGVLLIACDSAYFERYGPAAWTALRRQDAGNTLLHVHLCAPTPAAQRLALALAKADPLLRFTTSPLPGGLAAGEPTLV YYTCLRFLVLPALQQAYQRPILITDADLLAVAPLDDLWRAVEGKAAALIAFPKLRMNLWAWLTASVVVVPFEGAGQRFAT LLRAYIEAQIARGLLLWHLDQAALAAVTLNGGLEIGFLAPEVMDAAPWGPEDGGNAAEGSRHPAGTAVFWSITGSRAEHV HKLDSAVFRDLDRRPPPVAADRPLVVLSPAVPPDPMGQAAVLGRLLDGRPALALRFVTAGLPAQPTQADGAVWTFQTTRP PAGWVEALGAGEAAAAGYEGFVAARAAEILALVGADRPCALLACTADPLDLPAATLVARALGIPLVVYLFDDPVFQWPDS MAVVRAGAERWARVWTREAAEIIAPNPLLADGIAARYGRRPIVVLNGSLTPLNREPPPPWPAPPAALSLVFTGSIYHAQA DALGRVVAALDRLAGRWQLHLYTPQDTATLRGLGLTGPHVFPHAAVTAQAVVPIQRAAEALVLPLAFTSGVPEVVRTAAP GKLGDYLMSGRPILVHAPADSYAARLFAEEGCGAVVGIADVDRLVETLTRLDRDEVWRQSLIDAARRVAPSYGMDVARCV FWERMDRLLAESSLGEGGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86870; Mature: 86738
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAMDAEDSPFTALGDEAWEAGSWRKAALFYGRALDGGEVGPPITARLIFRQMVAEANSG CCCCCCCCCCCEECCCHHHCCCCCEEEHEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCC AILPALRALRALLALPIEEWPSDVRSQLPTAEAALLHRAGQPEEADRAAQSYGPVALASG CHHHHHHHHHHHHHCCHHHCCHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHCCCEEEECC YTSGSAMLRFGAAFQAAVARPPGRLDLRWLLPALPPPPSQGGAAGVLLIACDSAYFERYG CCCCHHHHHHHHHHHHHHCCCCCCEEHEECCCCCCCCCCCCCCCEEEEEEECHHHHHHCC PAAWTALRRQDAGNTLLHVHLCAPTPAAQRLALALAKADPLLRFTTSPLPGGLAAGEPTL HHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHH VYYTCLRFLVLPALQQAYQRPILITDADLLAVAPLDDLWRAVEGKAAALIAFPKLRMNLW HHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCHHHHHHHHCCCCEEEEECHHHHHHHH AWLTASVVVVPFEGAGQRFATLLRAYIEAQIARGLLLWHLDQAALAAVTLNGGLEIGFLA HHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEECHHHEEEEEECCCEEEEEEC PEVMDAAPWGPEDGGNAAEGSRHPAGTAVFWSITGSRAEHVHKLDSAVFRDLDRRPPPVA HHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCC ADRPLVVLSPAVPPDPMGQAAVLGRLLDGRPALALRFVTAGLPAQPTQADGAVWTFQTTR CCCCEEEECCCCCCCCCCHHHHHHHHHCCCCHHEEEEECCCCCCCCCCCCCCEEEEECCC PPAGWVEALGAGEAAAAGYEGFVAARAAEILALVGADRPCALLACTADPLDLPAATLVAR CCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHH ALGIPLVVYLFDDPVFQWPDSMAVVRAGAERWARVWTREAAEIIAPNPLLADGIAARYGR HHCCCEEEEEECCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC RPIVVLNGSLTPLNREPPPPWPAPPAALSLVFTGSIYHAQADALGRVVAALDRLAGRWQL CCEEEECCCCCCCCCCCCCCCCCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEE HLYTPQDTATLRGLGLTGPHVFPHAAVTAQAVVPIQRAAEALVLPLAFTSGVPEVVRTAA EEECCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEHHHHHCCCHHHHHHCC PGKLGDYLMSGRPILVHAPADSYAARLFAEEGCGAVVGIADVDRLVETLTRLDRDEVWRQ CCHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCHHHHHHH SLIDAARRVAPSYGMDVARCVFWERMDRLLAESSLGEGGQ HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SAMDAEDSPFTALGDEAWEAGSWRKAALFYGRALDGGEVGPPITARLIFRQMVAEANSG CCCCCCCCCCEECCCHHHCCCCCEEEHEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCC AILPALRALRALLALPIEEWPSDVRSQLPTAEAALLHRAGQPEEADRAAQSYGPVALASG CHHHHHHHHHHHHHCCHHHCCHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHCCCEEEECC YTSGSAMLRFGAAFQAAVARPPGRLDLRWLLPALPPPPSQGGAAGVLLIACDSAYFERYG CCCCHHHHHHHHHHHHHHCCCCCCEEHEECCCCCCCCCCCCCCCEEEEEEECHHHHHHCC PAAWTALRRQDAGNTLLHVHLCAPTPAAQRLALALAKADPLLRFTTSPLPGGLAAGEPTL HHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHH VYYTCLRFLVLPALQQAYQRPILITDADLLAVAPLDDLWRAVEGKAAALIAFPKLRMNLW HHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCHHHHHHHHCCCCEEEEECHHHHHHHH AWLTASVVVVPFEGAGQRFATLLRAYIEAQIARGLLLWHLDQAALAAVTLNGGLEIGFLA HHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEECHHHEEEEEECCCEEEEEEC PEVMDAAPWGPEDGGNAAEGSRHPAGTAVFWSITGSRAEHVHKLDSAVFRDLDRRPPPVA HHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCC ADRPLVVLSPAVPPDPMGQAAVLGRLLDGRPALALRFVTAGLPAQPTQADGAVWTFQTTR CCCCEEEECCCCCCCCCCHHHHHHHHHCCCCHHEEEEECCCCCCCCCCCCCCEEEEECCC PPAGWVEALGAGEAAAAGYEGFVAARAAEILALVGADRPCALLACTADPLDLPAATLVAR CCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHH ALGIPLVVYLFDDPVFQWPDSMAVVRAGAERWARVWTREAAEIIAPNPLLADGIAARYGR HHCCCEEEEEECCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC RPIVVLNGSLTPLNREPPPPWPAPPAALSLVFTGSIYHAQADALGRVVAALDRLAGRWQL CCEEEECCCCCCCCCCCCCCCCCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEE HLYTPQDTATLRGLGLTGPHVFPHAAVTAQAVVPIQRAAEALVLPLAFTSGVPEVVRTAA EEECCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEHHHHHCCCHHHHHHCC PGKLGDYLMSGRPILVHAPADSYAARLFAEEGCGAVVGIADVDRLVETLTRLDRDEVWRQ CCHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCHHHHHHH SLIDAARRVAPSYGMDVARCVFWERMDRLLAESSLGEGGQ HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA