| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594070
Identifier: 83594070
GI number: 83594070
Start: 3167907
End: 3169529
Strand: Reverse
Name: 83594070
Synonym: Rru_A2738
Alternate gene names: NA
Gene position: 3169529-3167907 (Counterclockwise)
Preceding gene: 83594071
Following gene: 83594069
Centisome position: 72.82
GC content: 65.56
Gene sequence:
>1623_bases ATGAACGGATCCTTGCCGCGGCTTTTGATTATCGACACCTTGAAGCCCGTGGAACGCTCGTTCATGCGCGACCTGATCGC GCCGCTCGATCGCGATTTCGCGGTGCGTTTCCTGCATCCCCAGGGTACGGAGGGGCTGGCCGAGGCGATCGCCGACGCCG ATGTGGTGTGGTTCGAATGGTGCGCCCATCATGCGGCCTGGGCGACGCGGTCGCTTGATCTTGGCGGTAAGCGCGTGGTC ATCCGCCTGCATTCCACCGAGATTTACGACAGCACATTCCCCCAGTCGATCCCCTGGGAGGTCGTCGATCACCTGATCCT GGTGGGCGAGGATATCCGCGGCGAGGTGGAGGAGGCGATCCCCGGGCTGGCCAAGCGGGTCGAGATCACGGTCATCGCCA ATGGCGTCGATTGCACGCTGTTTCGTCCGGGGCGGGCCGCCGATCCCCATGCCATCGGCTGGGTTGGCGATGTGGCGATG AAGAAAAACCCGATGCTGGCCCTGCAGATCATCGGCGCCTTGGTCGAAGAGGACCCGCGCTATCACCTGCATATGGCCGG AGCCATGCCCTGTCGGCGGACGGCGCGCTATCTGGCCCATCAGATCGCCGAGCGCGGCCTGGGGGCGCATGTGAGTTTCC ACGGTCCCGTGTCCACGATGCCGGCGTGGTACAGGGCGATGGGGGCGCTGCTGTCGACCACGCTTTATGAAAGCTTCGGG TTGAATATTCTGGAGGCCATGGCTTCGGGGTGCCGGCCGGTGGTCCATAACTACCCCGGTGCCGGGCGGTTATGGCCGCG CGAGATCTTATTCAATTCCGTTGACGAGGCGGTGGCCCTGCTGCGGCGCGAGGACTTCGCGGACTATCGGGCTTTCGCCG AGACCTTCGATTTGCCCCGCCAGATCGAGGCGACGCGGGCGCTGTTGAGCGGTCCGCCCGGTGCCCGCAAAAACGCTGTC TTCGATCCGGCGGCCTATTGGGATCGCCGCCATGGCGATCTGCGCGGCCAATTGCGCGCCGTGGCCCACCAGGACCTTGA CGAGGCGGAGAACCGCGCCGATTACGAGGAGAACTTGCGCCATCTGATCGCGCCGCTTCAGGCGCGCTTTGCCACTCCGC AAGGCGTTGATCTGCTTGATTGCGGCTGCGGCTCGGGCCATGTGGCCCAAAGGTTCGCCGGCCTGGGTTTTTCCGTGCGC GGGGTGGATTTCTCGCCGACGGCGGTCGATGAGGCGGCCAAGCGAGTGCCGGGCGGATCGTTTCAGTGCGGATCTTTGGC CGATCTGTCCGAGCCGCCGGCCCGGGTGGTGCTCTGCCTTGATGTCTTGTTCCATGTGCTTGATGACGCGGTCTGGCGGC AGACGCTTGACCGGTTGGCCGCCCATGTCGTCCCCGGCGGCGTTTTGCTGATTCTGGAGCATTTCCCCGAGGCCGAGGGG CAAGGGGCCGCCGCCGCGCCGGGGCCGGTCCGCCATGTGCGCTGGCGTTCCCTGGCCGCCTATCAGGAGCGGTTCGCCGC TCTTGGCCTGACCCTGGCCGGGGTGGATGTCTATCGCCAGCCGGCCTCCGGGGCGATGAAGACCTTGATGGTTGTCGATC GCTTGCCGGAGAAGGAAGCATGA
Upstream 100 bases:
>100_bases GGCGGGTGGCGCCGTCCTATGGCATGGATGTGGCGCGCTGTGTTTTCTGGGAGCGGATGGATCGTCTGCTGGCCGAGTCA TCGCTTGGGGAGGGGGGGCA
Downstream 100 bases:
>100_bases CCGTCATCGCGCTGCGTCATCTGGGGCCGGCGGAGCGCAAGAGCTTCGCCCGCCATCTGGCCGGGGGGGATTTTCCGGGC AAAGGGGCGTGGGACGACGG
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: Methyltransferase Type; Galactosyltransferase-Related Protein; Glycosyl Transferase; TPR-Repeat-Containing Protein; TPR Repeat-Containing Glycosyltransferase; Tetratricopeptide TPR_2 Repeat Protein; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase Family Protein
Number of amino acids: Translated: 540; Mature: 540
Protein sequence:
>540_residues MNGSLPRLLIIDTLKPVERSFMRDLIAPLDRDFAVRFLHPQGTEGLAEAIADADVVWFEWCAHHAAWATRSLDLGGKRVV IRLHSTEIYDSTFPQSIPWEVVDHLILVGEDIRGEVEEAIPGLAKRVEITVIANGVDCTLFRPGRAADPHAIGWVGDVAM KKNPMLALQIIGALVEEDPRYHLHMAGAMPCRRTARYLAHQIAERGLGAHVSFHGPVSTMPAWYRAMGALLSTTLYESFG LNILEAMASGCRPVVHNYPGAGRLWPREILFNSVDEAVALLRREDFADYRAFAETFDLPRQIEATRALLSGPPGARKNAV FDPAAYWDRRHGDLRGQLRAVAHQDLDEAENRADYEENLRHLIAPLQARFATPQGVDLLDCGCGSGHVAQRFAGLGFSVR GVDFSPTAVDEAAKRVPGGSFQCGSLADLSEPPARVVLCLDVLFHVLDDAVWRQTLDRLAAHVVPGGVLLILEHFPEAEG QGAAAAPGPVRHVRWRSLAAYQERFAALGLTLAGVDVYRQPASGAMKTLMVVDRLPEKEA
Sequences:
>Translated_540_residues MNGSLPRLLIIDTLKPVERSFMRDLIAPLDRDFAVRFLHPQGTEGLAEAIADADVVWFEWCAHHAAWATRSLDLGGKRVV IRLHSTEIYDSTFPQSIPWEVVDHLILVGEDIRGEVEEAIPGLAKRVEITVIANGVDCTLFRPGRAADPHAIGWVGDVAM KKNPMLALQIIGALVEEDPRYHLHMAGAMPCRRTARYLAHQIAERGLGAHVSFHGPVSTMPAWYRAMGALLSTTLYESFG LNILEAMASGCRPVVHNYPGAGRLWPREILFNSVDEAVALLRREDFADYRAFAETFDLPRQIEATRALLSGPPGARKNAV FDPAAYWDRRHGDLRGQLRAVAHQDLDEAENRADYEENLRHLIAPLQARFATPQGVDLLDCGCGSGHVAQRFAGLGFSVR GVDFSPTAVDEAAKRVPGGSFQCGSLADLSEPPARVVLCLDVLFHVLDDAVWRQTLDRLAAHVVPGGVLLILEHFPEAEG QGAAAAPGPVRHVRWRSLAAYQERFAALGLTLAGVDVYRQPASGAMKTLMVVDRLPEKEA >Mature_540_residues MNGSLPRLLIIDTLKPVERSFMRDLIAPLDRDFAVRFLHPQGTEGLAEAIADADVVWFEWCAHHAAWATRSLDLGGKRVV IRLHSTEIYDSTFPQSIPWEVVDHLILVGEDIRGEVEEAIPGLAKRVEITVIANGVDCTLFRPGRAADPHAIGWVGDVAM KKNPMLALQIIGALVEEDPRYHLHMAGAMPCRRTARYLAHQIAERGLGAHVSFHGPVSTMPAWYRAMGALLSTTLYESFG LNILEAMASGCRPVVHNYPGAGRLWPREILFNSVDEAVALLRREDFADYRAFAETFDLPRQIEATRALLSGPPGARKNAV FDPAAYWDRRHGDLRGQLRAVAHQDLDEAENRADYEENLRHLIAPLQARFATPQGVDLLDCGCGSGHVAQRFAGLGFSVR GVDFSPTAVDEAAKRVPGGSFQCGSLADLSEPPARVVLCLDVLFHVLDDAVWRQTLDRLAAHVVPGGVLLILEHFPEAEG QGAAAAPGPVRHVRWRSLAAYQERFAALGLTLAGVDVYRQPASGAMKTLMVVDRLPEKEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59249; Mature: 59249
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGSLPRLLIIDTLKPVERSFMRDLIAPLDRDFAVRFLHPQGTEGLAEAIADADVVWFEW CCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCHHHHHH CAHHAAWATRSLDLGGKRVVIRLHSTEIYDSTFPQSIPWEVVDHLILVGEDIRGEVEEAI HHHHHHHHHCCCCCCCCEEEEEEECCCHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHC PGLAKRVEITVIANGVDCTLFRPGRAADPHAIGWVGDVAMKKNPMLALQIIGALVEEDPR CHHHHEEEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCC YHLHMAGAMPCRRTARYLAHQIAERGLGAHVSFHGPVSTMPAWYRAMGALLSTTLYESFG EEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHC LNILEAMASGCRPVVHNYPGAGRLWPREILFNSVDEAVALLRREDFADYRAFAETFDLPR HHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QIEATRALLSGPPGARKNAVFDPAAYWDRRHGDLRGQLRAVAHQDLDEAENRADYEENLR HHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH HLIAPLQARFATPQGVDLLDCGCGSGHVAQRFAGLGFSVRGVDFSPTAVDEAAKRVPGGS HHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCC FQCGSLADLSEPPARVVLCLDVLFHVLDDAVWRQTLDRLAAHVVPGGVLLILEHFPEAEG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHEECCCCCCC QGAAAAPGPVRHVRWRSLAAYQERFAALGLTLAGVDVYRQPASGAMKTLMVVDRLPEKEA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNGSLPRLLIIDTLKPVERSFMRDLIAPLDRDFAVRFLHPQGTEGLAEAIADADVVWFEW CCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCHHHHHH CAHHAAWATRSLDLGGKRVVIRLHSTEIYDSTFPQSIPWEVVDHLILVGEDIRGEVEEAI HHHHHHHHHCCCCCCCCEEEEEEECCCHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHC PGLAKRVEITVIANGVDCTLFRPGRAADPHAIGWVGDVAMKKNPMLALQIIGALVEEDPR CHHHHEEEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCC YHLHMAGAMPCRRTARYLAHQIAERGLGAHVSFHGPVSTMPAWYRAMGALLSTTLYESFG EEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHC LNILEAMASGCRPVVHNYPGAGRLWPREILFNSVDEAVALLRREDFADYRAFAETFDLPR HHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QIEATRALLSGPPGARKNAVFDPAAYWDRRHGDLRGQLRAVAHQDLDEAENRADYEENLR HHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH HLIAPLQARFATPQGVDLLDCGCGSGHVAQRFAGLGFSVRGVDFSPTAVDEAAKRVPGGS HHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCC FQCGSLADLSEPPARVVLCLDVLFHVLDDAVWRQTLDRLAAHVVPGGVLLILEHFPEAEG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHEECCCCCCC QGAAAAPGPVRHVRWRSLAAYQERFAALGLTLAGVDVYRQPASGAMKTLMVVDRLPEKEA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA