| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594044
Identifier: 83594044
GI number: 83594044
Start: 3134490
End: 3135110
Strand: Reverse
Name: 83594044
Synonym: Rru_A2712
Alternate gene names: NA
Gene position: 3135110-3134490 (Counterclockwise)
Preceding gene: 83594049
Following gene: 83594043
Centisome position: 72.02
GC content: 69.08
Gene sequence:
>621_bases ATGGCCCGGGGGAACACCCGCGCGCTGATTCTGGAAGCGGCGTTGGACTGCTTCCTGGCCAAGGGCTTCGCCGGAACCAG CGTGGCCGATATCCGCGCCCGCTCGGGCGCCAGCACCGGCAGCATCTATCATTTCTTTGACACCAAGGACGGGGTGGCGC TGGCGCTCTGCGCCGAAGGCTTGCGATCCTGGGCCGGGGCGGTCAGCGCCGTGCCGGCCCAGGGCGCGGCCGAAGGGGTG ATCCGCGCCATGGTCGACGCCGCCATCGATTGGGCGCTGGGCAACGACCGCCTGCACCGGTTTCTTTTGCAAAGCGATTC GCTGGTGCCGGTGGCCGCCCAGCGCTCGGACATGGTCGATGCGCTGATGGAAGCCCGTCTGGCCCAGGAGCGCATCTTGC GCGACCTGACCGCCAAGGGATCGATTCGGCCGATGGCCTGGGACATGGCGCGCGCCATGATTCTGGGGCCGGCCGAATCC TACCTGCGCGAACGCGCCCATGGCCGCGCCGCCGCCCTGCCCGAGGAAGCCAAGGCCCTGTTGGGCGAGGCGGCATGGCA GGCGGTGCGGGCCGATCCCCAGGCCAAACCCAAGCGAGAGCGTCAATGGAATCTGATCTGA
Upstream 100 bases:
>100_bases GAAACCTGAAATCGCCTTATGCCGATCTTTTCTTGTTGAAGACGGCGCCGCGAGGTCTCAGGGTCGCGCCCCGAGATCGA CAAAAGTATTGGAGGACGGA
Downstream 100 bases:
>100_bases GCCTTTCCCGGGGCGGTTCGCCCGTCGTTCCGGGGGCGTCGCGGCCGGTCATCATCGCCGCCGAGGATCCGGCCCAGCCG GACATCCTGGCCCTGCTCGC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MARGNTRALILEAALDCFLAKGFAGTSVADIRARSGASTGSIYHFFDTKDGVALALCAEGLRSWAGAVSAVPAQGAAEGV IRAMVDAAIDWALGNDRLHRFLLQSDSLVPVAAQRSDMVDALMEARLAQERILRDLTAKGSIRPMAWDMARAMILGPAES YLRERAHGRAAALPEEAKALLGEAAWQAVRADPQAKPKRERQWNLI
Sequences:
>Translated_206_residues MARGNTRALILEAALDCFLAKGFAGTSVADIRARSGASTGSIYHFFDTKDGVALALCAEGLRSWAGAVSAVPAQGAAEGV IRAMVDAAIDWALGNDRLHRFLLQSDSLVPVAAQRSDMVDALMEARLAQERILRDLTAKGSIRPMAWDMARAMILGPAES YLRERAHGRAAALPEEAKALLGEAAWQAVRADPQAKPKRERQWNLI >Mature_205_residues ARGNTRALILEAALDCFLAKGFAGTSVADIRARSGASTGSIYHFFDTKDGVALALCAEGLRSWAGAVSAVPAQGAAEGVI RAMVDAAIDWALGNDRLHRFLLQSDSLVPVAAQRSDMVDALMEARLAQERILRDLTAKGSIRPMAWDMARAMILGPAESY LRERAHGRAAALPEEAKALLGEAAWQAVRADPQAKPKRERQWNLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22151; Mature: 22019
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARGNTRALILEAALDCFLAKGFAGTSVADIRARSGASTGSIYHFFDTKDGVALALCAEG CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHH LRSWAGAVSAVPAQGAAEGVIRAMVDAAIDWALGNDRLHRFLLQSDSLVPVAAQRSDMVD HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHH ALMEARLAQERILRDLTAKGSIRPMAWDMARAMILGPAESYLRERAHGRAAALPEEAKAL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHCCCHHHHHH LGEAAWQAVRADPQAKPKRERQWNLI HHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure ARGNTRALILEAALDCFLAKGFAGTSVADIRARSGASTGSIYHFFDTKDGVALALCAEG CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHH LRSWAGAVSAVPAQGAAEGVIRAMVDAAIDWALGNDRLHRFLLQSDSLVPVAAQRSDMVD HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHH ALMEARLAQERILRDLTAKGSIRPMAWDMARAMILGPAESYLRERAHGRAAALPEEAKAL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHCCCHHHHHH LGEAAWQAVRADPQAKPKRERQWNLI HHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA