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The map label for this gene is ycaC [C]

Identifier: 83594049

GI number: 83594049

Start: 3140758

End: 3141327

Strand: Reverse

Name: ycaC [C]

Synonym: Rru_A2717

Alternate gene names: 83594049

Gene position: 3141327-3140758 (Counterclockwise)

Preceding gene: 83594052

Following gene: 83594044

Centisome position: 72.17

GC content: 66.49

Gene sequence:

>570_bases
ATGTCGTTTGCCACCCCTTCGCTGATTGATGCCGCCCGTTCCGTGCTGATCGTCGTCGATATCCAGGAACGCCTCTGTCC
GGTGATGACCGATCCGCGCGGCGTTCTGTTCAACGGGGCGCGTCTGGTGCGCGGCGCCCGGCGCCTTGGGGTGCCCGTGG
TGGTGACCGAGCAGTATCCCAAGGGCCTGGGCCCGACCATGCACGATATTCTAAGCGAGTTGGGCGACGGCGCGAGCAGC
GCGGTGATCGAAAAGACCCACTTTTCGGCGGCGGCCGAACCCTTGGTACGCCAACACCTGGAGAGCCTGGGGCGCAGGCA
GGCGGTGATCTGCGGCATCGAGGCCCATGTCTGCGTGACCCAGACCGCCATCGATCTGCGGGCGGCCGGCTGGGAGGTCT
TCGTCGTGAGCGACGCCTGCTCGTCACGCCGCCCCGAAAGCCTGACCGCCGCCCTGACCCGCTTCCCCGCCGCCGGCGTC
GTCCCGGTGATCACCGAAATGGTGCTGTTCGAGTGGCTGGCCGACAAGAACAACGACGGCTTCAAGGACATCATGTCCCT
GGTGCGCTGA

Upstream 100 bases:

>100_bases
GGTAGCGAAGGGGATTATTTCGCAGCCGACCCCTCCCCCTGTCGTTTCAGGATCCCCCTCGGGAGCCCATCCCGGGAGCC
CCCTCCAGGAGACCGTGTCG

Downstream 100 bases:

>100_bases
GCAAGGGGCGACCGCGGACGGCGGTCCAAGACGGCCCGTCGCCTTGGGGGCCTGTGAGGCCGAAGGGCAAGAGCTCCTTC
GGCCCCCTTATACCCGCTCT

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: Isochorismatase Family Protein; Isochorismatase Superfamily Hydrolase; Isochorismatase Hydrolase Family Protein; Nicotinamidase-Like Amidase; Amidase; Isochorismatase Family Hydrolase; Isochorismatase Domain-Containing; Hydrolase; Amidohydrolase; Amidase Related Nicotinamidase; YcaC Like Amidohydrolase; Isochorismatase Family; Nicotinamidase; YcaC-Related Amidohydrolase; Isochorismatase Domain-Containing A; Isochorismatase Hydrolase Family; Hydrolase Isochorismatase Family; Nicotinamidase-Related Amidase

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MSFATPSLIDAARSVLIVVDIQERLCPVMTDPRGVLFNGARLVRGARRLGVPVVVTEQYPKGLGPTMHDILSELGDGASS
AVIEKTHFSAAAEPLVRQHLESLGRRQAVICGIEAHVCVTQTAIDLRAAGWEVFVVSDACSSRRPESLTAALTRFPAAGV
VPVITEMVLFEWLADKNNDGFKDIMSLVR

Sequences:

>Translated_189_residues
MSFATPSLIDAARSVLIVVDIQERLCPVMTDPRGVLFNGARLVRGARRLGVPVVVTEQYPKGLGPTMHDILSELGDGASS
AVIEKTHFSAAAEPLVRQHLESLGRRQAVICGIEAHVCVTQTAIDLRAAGWEVFVVSDACSSRRPESLTAALTRFPAAGV
VPVITEMVLFEWLADKNNDGFKDIMSLVR
>Mature_188_residues
SFATPSLIDAARSVLIVVDIQERLCPVMTDPRGVLFNGARLVRGARRLGVPVVVTEQYPKGLGPTMHDILSELGDGASSA
VIEKTHFSAAAEPLVRQHLESLGRRQAVICGIEAHVCVTQTAIDLRAAGWEVFVVSDACSSRRPESLTAALTRFPAAGVV
PVITEMVLFEWLADKNNDGFKDIMSLVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI103471987, Length=178, Percent_Identity=38.7640449438202, Blast_Score=120, Evalue=7e-28,
Organism=Homo sapiens, GI209969695, Length=192, Percent_Identity=35.4166666666667, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI13376007, Length=208, Percent_Identity=32.6923076923077, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17540156, Length=184, Percent_Identity=34.7826086956522, Blast_Score=99, Evalue=1e-21,
Organism=Drosophila melanogaster, GI21357489, Length=180, Percent_Identity=35, Blast_Score=110, Evalue=6e-25,
Organism=Drosophila melanogaster, GI19922924, Length=184, Percent_Identity=34.2391304347826, Blast_Score=105, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20408; Mature: 20277

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFATPSLIDAARSVLIVVDIQERLCPVMTDPRGVLFNGARLVRGARRLGVPVVVTEQYP
CCCCCHHHHHHHHHEEEEEECHHHHCCCCCCCCCCEECCHHHHHHHHHHCCCEEEECCCC
KGLGPTMHDILSELGDGASSAVIEKTHFSAAAEPLVRQHLESLGRRQAVICGIEAHVCVT
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHH
QTAIDLRAAGWEVFVVSDACSSRRPESLTAALTRFPAAGVVPVITEMVLFEWLADKNNDG
HHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC
FKDIMSLVR
HHHHHHHHC
>Mature Secondary Structure 
SFATPSLIDAARSVLIVVDIQERLCPVMTDPRGVLFNGARLVRGARRLGVPVVVTEQYP
CCCCHHHHHHHHHEEEEEECHHHHCCCCCCCCCCEECCHHHHHHHHHHCCCEEEECCCC
KGLGPTMHDILSELGDGASSAVIEKTHFSAAAEPLVRQHLESLGRRQAVICGIEAHVCVT
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHH
QTAIDLRAAGWEVFVVSDACSSRRPESLTAALTRFPAAGVVPVITEMVLFEWLADKNNDG
HHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC
FKDIMSLVR
HHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA