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The map label for this gene is secY [H]

Identifier: 83594000

GI number: 83594000

Start: 3097359

End: 3098702

Strand: Reverse

Name: secY [H]

Synonym: Rru_A2668

Alternate gene names: 83594000

Gene position: 3098702-3097359 (Counterclockwise)

Preceding gene: 83594001

Following gene: 83593999

Centisome position: 71.19

GC content: 60.71

Gene sequence:

>1344_bases
ATGGCGTCCGCCGCCGAACAACTCGCCTCTAATATGAACTTTGGCGTTTTCGCCAAGGCCACCGAGCTGAAGAAGCGCAT
CTGGTTTACGCTGGCGGCGCTGGTCGTTTATCGGGTGGGCACCTATATCCCGCTGCCCGGCATCGACCCCCAGGCGATGG
CCGATGTCTTTTCGCGTAATGGCGGGGGCATCCTTGGCATGTTCGACATGTTCGCCGGTGGCGCGCTGTCGCGTATGACC
ATCTTCGCGCTCAACATCATGCCCTACATCTCGGCCTCGATCATCATGCAGCTGATGACCTCCATCAGCCCGCAGCTCGA
AGCCCTGAAGAAAGAGGGCGAGTCGGGCCGCAAGCGCATCAACCAGTACACCCGCTATCTGACGGTGCTGATCACCGCCC
TGCAGGCCTATGGCATCGCCGTTGGCCTGGAGAGCATGACCAGCTCGAGCGGGGCGGCCGTCCACGATGCCGGCATGTTC
TTCCGCTTCACCACCGTCGTCACCCTGATGGGCGGCACGCTGTTCCTGATGTGGCTGGGCGAGCAGATCACCGCGCGCGG
CGTCGGCAATGGCATTTCGCTGATCATTTTCACCGGCATCGTCGCCCAATTGCCCCATGCCTTGGTCGGCATGCTGGAAT
TGGGCCGTACCGGGGCGCTGTCGCCCGCCGTGATCCTGGGTATCCTGGTTCTGGCCGTCGGCGTCATCGCCTTCATCGTT
TTCATGGAGCGCGCCCAGCGGCGGATTCTGATCCAGTATCCCAAGCGCCAGCAGGGCAATAAGATGTATGGCGGCGAAAG
CAGCCATATGCCGCTCAAGATCAATACCCCGGGCGTCATCCCGCCGATCTTCGCCAGCTCCATTCTGCTGCTGCCGATGA
CCGCCGCCCAGTTCTCGGCCGGTCAGGGCCCCGAGTGGCTGACGACGATCACCACTCTGCTTGGTCACGGCCAGCCGCTT
TACATGGCGCTCTATGCCGCTTTGATCGCCTTCTTCGCCTTCTTCTATACCGCTGTCGTCTTCAATCCCGAGGATACGGC
GGAGAATCTGAAGAAGTACGGCGGGTTCATTCCCGGTATCCGGCCCGGCCGCAATACCTCGGAATACCTCGACTATGTGC
TGACCCGCTTGACGGCGGTCGGGGCGATCTACCTGATCTTCATTTCGATCCTGCCTGAATTTCTGATCTCGAAAGTCGGC
GTGCCCTTCTACTTCGGTGGCACCAGTCTGCTGATCGTGGTCACGGTGACGATGGACACGGTCGCGCAGATTCAGTCTCA
CCTGTTGGCCCATCAGTACGAGGGCCTTATCAAGAAGTCGAAGTTGCGGGGGAAACGCGGATGA

Upstream 100 bases:

>100_bases
TCATTGGGATGAACGGCTGTCCGTCGCCATGGTTTGGCCGTCGCCTTCGATTGGCGTCGTGAACGGGTTGAAGCCGCTCT
GGCCGACGGGAGCATGACGG

Downstream 100 bases:

>100_bases
CGGGCAAGCGCGTCATTTTCATGGGACCGCCGGGGGGCGGCAAAGGCACCCAGGCTCAGCGCCTTGAGAAGAAGTACCAG
TTGAAGCAGCTTTCCACCGG

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MASAAEQLASNMNFGVFAKATELKKRIWFTLAALVVYRVGTYIPLPGIDPQAMADVFSRNGGGILGMFDMFAGGALSRMT
IFALNIMPYISASIIMQLMTSISPQLEALKKEGESGRKRINQYTRYLTVLITALQAYGIAVGLESMTSSSGAAVHDAGMF
FRFTTVVTLMGGTLFLMWLGEQITARGVGNGISLIIFTGIVAQLPHALVGMLELGRTGALSPAVILGILVLAVGVIAFIV
FMERAQRRILIQYPKRQQGNKMYGGESSHMPLKINTPGVIPPIFASSILLLPMTAAQFSAGQGPEWLTTITTLLGHGQPL
YMALYAALIAFFAFFYTAVVFNPEDTAENLKKYGGFIPGIRPGRNTSEYLDYVLTRLTAVGAIYLIFISILPEFLISKVG
VPFYFGGTSLLIVVTVTMDTVAQIQSHLLAHQYEGLIKKSKLRGKRG

Sequences:

>Translated_447_residues
MASAAEQLASNMNFGVFAKATELKKRIWFTLAALVVYRVGTYIPLPGIDPQAMADVFSRNGGGILGMFDMFAGGALSRMT
IFALNIMPYISASIIMQLMTSISPQLEALKKEGESGRKRINQYTRYLTVLITALQAYGIAVGLESMTSSSGAAVHDAGMF
FRFTTVVTLMGGTLFLMWLGEQITARGVGNGISLIIFTGIVAQLPHALVGMLELGRTGALSPAVILGILVLAVGVIAFIV
FMERAQRRILIQYPKRQQGNKMYGGESSHMPLKINTPGVIPPIFASSILLLPMTAAQFSAGQGPEWLTTITTLLGHGQPL
YMALYAALIAFFAFFYTAVVFNPEDTAENLKKYGGFIPGIRPGRNTSEYLDYVLTRLTAVGAIYLIFISILPEFLISKVG
VPFYFGGTSLLIVVTVTMDTVAQIQSHLLAHQYEGLIKKSKLRGKRG
>Mature_446_residues
ASAAEQLASNMNFGVFAKATELKKRIWFTLAALVVYRVGTYIPLPGIDPQAMADVFSRNGGGILGMFDMFAGGALSRMTI
FALNIMPYISASIIMQLMTSISPQLEALKKEGESGRKRINQYTRYLTVLITALQAYGIAVGLESMTSSSGAAVHDAGMFF
RFTTVVTLMGGTLFLMWLGEQITARGVGNGISLIIFTGIVAQLPHALVGMLELGRTGALSPAVILGILVLAVGVIAFIVF
MERAQRRILIQYPKRQQGNKMYGGESSHMPLKINTPGVIPPIFASSILLLPMTAAQFSAGQGPEWLTTITTLLGHGQPLY
MALYAALIAFFAFFYTAVVFNPEDTAENLKKYGGFIPGIRPGRNTSEYLDYVLTRLTAVGAIYLIFISILPEFLISKVGV
PFYFGGTSLLIVVTVTMDTVAQIQSHLLAHQYEGLIKKSKLRGKRG

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=424, Percent_Identity=56.3679245283019, Blast_Score=447, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 48454; Mature: 48323

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASAAEQLASNMNFGVFAKATELKKRIWFTLAALVVYRVGTYIPLPGIDPQAMADVFSRN
CCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC
GGGILGMFDMFAGGALSRMTIFALNIMPYISASIIMQLMTSISPQLEALKKEGESGRKRI
CCCEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHH
NQYTRYLTVLITALQAYGIAVGLESMTSSSGAAVHDAGMFFRFTTVVTLMGGTLFLMWLG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
EQITARGVGNGISLIIFTGIVAQLPHALVGMLELGRTGALSPAVILGILVLAVGVIAFIV
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
FMERAQRRILIQYPKRQQGNKMYGGESSHMPLKINTPGVIPPIFASSILLLPMTAAQFSA
HHHHHHHHEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCC
GQGPEWLTTITTLLGHGQPLYMALYAALIAFFAFFYTAVVFNPEDTAENLKKYGGFIPGI
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCCCC
RPGRNTSEYLDYVLTRLTAVGAIYLIFISILPEFLISKVGVPFYFGGTSLLIVVTVTMDT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEHHHHH
VAQIQSHLLAHQYEGLIKKSKLRGKRG
HHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ASAAEQLASNMNFGVFAKATELKKRIWFTLAALVVYRVGTYIPLPGIDPQAMADVFSRN
CCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC
GGGILGMFDMFAGGALSRMTIFALNIMPYISASIIMQLMTSISPQLEALKKEGESGRKRI
CCCEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHH
NQYTRYLTVLITALQAYGIAVGLESMTSSSGAAVHDAGMFFRFTTVVTLMGGTLFLMWLG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
EQITARGVGNGISLIIFTGIVAQLPHALVGMLELGRTGALSPAVILGILVLAVGVIAFIV
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
FMERAQRRILIQYPKRQQGNKMYGGESSHMPLKINTPGVIPPIFASSILLLPMTAAQFSA
HHHHHHHHEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCC
GQGPEWLTTITTLLGHGQPLYMALYAALIAFFAFFYTAVVFNPEDTAENLKKYGGFIPGI
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCCCC
RPGRNTSEYLDYVLTRLTAVGAIYLIFISILPEFLISKVGVPFYFGGTSLLIVVTVTMDT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEHHHHH
VAQIQSHLLAHQYEGLIKKSKLRGKRG
HHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA