| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593961
Identifier: 83593961
GI number: 83593961
Start: 3058446
End: 3059474
Strand: Reverse
Name: 83593961
Synonym: Rru_A2629
Alternate gene names: NA
Gene position: 3059474-3058446 (Counterclockwise)
Preceding gene: 83593964
Following gene: 83593958
Centisome position: 70.29
GC content: 67.74
Gene sequence:
>1029_bases ATGGCCGATGACCTGGACTTTCCATTCGCGACCCCGCCGGCGGCCGGCGAGGCGATAACCGTGGCCCCGGGGGTGCTTTG GCTGCGCATGCCTTTACCCTTCGCCCTTGATCATATCAACCTGTGGGCCCTGGAGGACGGCGACGGCTGGACCCTGGTTG ACAGCGGGGTCGCCGATGATACCACCCGCGCCCTGTGGTCGCATGTGTTCGAAGGGCCCTTGGGGGGGCGGCCGGTAAAG CGGCTGATCTGCACCCATTTCCATCCCGATCATATGGGGTTGGCCGGCTGGTTGACCGACCGCTTCGACGTGGCGCTGTG GGCGACGCTGGGCGAATGGACCTATGGGCGCATGCTGGCGCTGGAAAGCGACGAAACGGTGGGGGCGGTCTCGAAGGCCT TTTATCACCGGGCCGGCGTCGATGCCCAGGGGCTGGAACTGGTGGCCCGGCGGGGAAACTCCTTTGCCAAACGCGTGGTG CCGCCGCCGCCCACCGTGCGGCGGATCATCGATGGCGAGGAGATCGCCATCGGCGGGCGGAGCTGGCGGGTGATCGTCGG ACGCGGCCATGCTCCCGAACATGCCGCCCTGTGGTGCGCCCAGGCCGGGGTGCTGATCAGCGGCGATCAGGTGCTGCCGC GCATCAGCCCCAATATCAGCGTCTGGCCGAGCGAACCCGACGCCGATCCCTTGTCGGGCTTTCTTGAAAGCCTCGGCCGT TTCGCGCCCTTGCCCGCCGAGACCCTGGTTCTGCCCAGTCACGGCCGGCCGTTTCACGGTCTGCACGCCCGCATCGAAGC CCTGGCCGCCCACCATGGCGATCGCTTAGCCGAGGTGGAGGCCGCCTGCCGCGATCGGGCGCTGAGCGCCCAGGATCTGC TTGGCGTGCTGTTCAAGCGCCCGCTTGACGCCAATACGGTGTTCTTCGCCCTTGGCGAGGCCCTGGCCCATGCCCATTGG TTGGAAGGTCAGGGACGCTTGCGGCGCAGCGAGGTCGATGGCGTCGTCCGCTTCACGGCGATCGCTTGA
Upstream 100 bases:
>100_bases GGCCGATCCTTGTGCGGTCTTGCCTGGAGGGTGAGCGGCGGGCAGTGTTGGGCTCGAGGCGAAACGGGCCTCTCGCGGCT CTGAAGGGATTTCTTCGACC
Downstream 100 bases:
>100_bases TCAGGATACCGCTATAAGCGGCGCGGCTGGCTGGCGGCATCGGCTTCAAGCAGGGCCGAGGTGTCTTCATAGGCAAAATC GGGGTGGTGGTCTTCCTGAA
Product: beta-lactamase-like
Products: NA
Alternate protein names: Metallo-Beta-Lactamase Family Protein; Beta-Lactamase Domain Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Zn-Dependent Hydrolase; Beta Lactamase; Metallo-Beta-Lactamase Superfamily; Metallo-Beta-Lactamase Domain Protein; Zinc Metallohydrolase; Zn-Dependent Hydrolase Glyoxylase; Metallo-Beta-Lactamase; Zinc Metallohydrolase Glyoxalase II Family; Metallo-Dependent Enzymatic Protein; AMP-Dependent Synthetase And Ligase; Beta-Lactamase Class B; Metallo-Hydrolase/Oxidoreductase Superfamily Protein; Zn-Dependent Hydrolase Including Glyoxylase-Like Protein
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MADDLDFPFATPPAAGEAITVAPGVLWLRMPLPFALDHINLWALEDGDGWTLVDSGVADDTTRALWSHVFEGPLGGRPVK RLICTHFHPDHMGLAGWLTDRFDVALWATLGEWTYGRMLALESDETVGAVSKAFYHRAGVDAQGLELVARRGNSFAKRVV PPPPTVRRIIDGEEIAIGGRSWRVIVGRGHAPEHAALWCAQAGVLISGDQVLPRISPNISVWPSEPDADPLSGFLESLGR FAPLPAETLVLPSHGRPFHGLHARIEALAAHHGDRLAEVEAACRDRALSAQDLLGVLFKRPLDANTVFFALGEALAHAHW LEGQGRLRRSEVDGVVRFTAIA
Sequences:
>Translated_342_residues MADDLDFPFATPPAAGEAITVAPGVLWLRMPLPFALDHINLWALEDGDGWTLVDSGVADDTTRALWSHVFEGPLGGRPVK RLICTHFHPDHMGLAGWLTDRFDVALWATLGEWTYGRMLALESDETVGAVSKAFYHRAGVDAQGLELVARRGNSFAKRVV PPPPTVRRIIDGEEIAIGGRSWRVIVGRGHAPEHAALWCAQAGVLISGDQVLPRISPNISVWPSEPDADPLSGFLESLGR FAPLPAETLVLPSHGRPFHGLHARIEALAAHHGDRLAEVEAACRDRALSAQDLLGVLFKRPLDANTVFFALGEALAHAHW LEGQGRLRRSEVDGVVRFTAIA >Mature_341_residues ADDLDFPFATPPAAGEAITVAPGVLWLRMPLPFALDHINLWALEDGDGWTLVDSGVADDTTRALWSHVFEGPLGGRPVKR LICTHFHPDHMGLAGWLTDRFDVALWATLGEWTYGRMLALESDETVGAVSKAFYHRAGVDAQGLELVARRGNSFAKRVVP PPPTVRRIIDGEEIAIGGRSWRVIVGRGHAPEHAALWCAQAGVLISGDQVLPRISPNISVWPSEPDADPLSGFLESLGRF APLPAETLVLPSHGRPFHGLHARIEALAAHHGDRLAEVEAACRDRALSAQDLLGVLFKRPLDANTVFFALGEALAHAHWL EGQGRLRRSEVDGVVRFTAIA
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37128; Mature: 36996
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDLDFPFATPPAAGEAITVAPGVLWLRMPLPFALDHINLWALEDGDGWTLVDSGVADD CCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCEECCEEEEEEECCCCEEEEECCCCCH TTRALWSHVFEGPLGGRPVKRLICTHFHPDHMGLAGWLTDRFDVALWATLGEWTYGRMLA HHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCEEEE LESDETVGAVSKAFYHRAGVDAQGLELVARRGNSFAKRVVPPPPTVRRIIDGEEIAIGGR ECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCCCCCCHHHHHHCCCCEEEECCC SWRVIVGRGHAPEHAALWCAQAGVLISGDQVLPRISPNISVWPSEPDADPLSGFLESLGR EEEEEEECCCCCCHHHHHHHHCCEEEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHH FAPLPAETLVLPSHGRPFHGLHARIEALAAHHGDRLAEVEAACRDRALSAQDLLGVLFKR CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHC PLDANTVFFALGEALAHAHWLEGQGRLRRSEVDGVVRFTAIA CCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHCCCEEEEEEEC >Mature Secondary Structure ADDLDFPFATPPAAGEAITVAPGVLWLRMPLPFALDHINLWALEDGDGWTLVDSGVADD CCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCEECCEEEEEEECCCCEEEEECCCCCH TTRALWSHVFEGPLGGRPVKRLICTHFHPDHMGLAGWLTDRFDVALWATLGEWTYGRMLA HHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCEEEE LESDETVGAVSKAFYHRAGVDAQGLELVARRGNSFAKRVVPPPPTVRRIIDGEEIAIGGR ECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCCCCCCHHHHHHCCCCEEEECCC SWRVIVGRGHAPEHAALWCAQAGVLISGDQVLPRISPNISVWPSEPDADPLSGFLESLGR EEEEEEECCCCCCHHHHHHHHCCEEEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHH FAPLPAETLVLPSHGRPFHGLHARIEALAAHHGDRLAEVEAACRDRALSAQDLLGVLFKR CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHC PLDANTVFFALGEALAHAHWLEGQGRLRRSEVDGVVRFTAIA CCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA