| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83593923
Identifier: 83593923
GI number: 83593923
Start: 3011509
End: 3012225
Strand: Reverse
Name: 83593923
Synonym: Rru_A2591
Alternate gene names: NA
Gene position: 3012225-3011509 (Counterclockwise)
Preceding gene: 83593925
Following gene: 83593922
Centisome position: 69.2
GC content: 72.8
Gene sequence:
>717_bases ATGGCCCAGTCCCCCAATGATGTCGATCCGCGCTTGCCCGCCCTGTCGCCCGCCGAGCGGCGCTTCGTCGCGTGTTATCT GGCCAATGGCCGCAAGGGCGCCAAGGCGTGGCGCGAGGCGGTCGAGGCCGGGGCCGCGCCGCGCGTCGCCTCGCGAAAAG CGGCGGCGTGGCTGGCCCGCGACCCGGTGCGGGCGGCCTTGGCCCGGGCCGAGCGGCGGGCGCGGGCGCGCACCGGGGCG GTGATCGAACGCTATGCCATCACCGAGGAACGGGTGCTGTCGGAACTGGCCTCGCTGGCCTTTTCGCGGCCGATGGATCT GATGCGGGTCACCGCCGACGGCGGGGCGGTGGTCGATCTTTCGGCCCTTGACGAGCGGCAGGCGGCGGCGATCGCCGAGC TGACGGTTGATGAATATGTGGCGGGCAAGGGCGAGGAGGCGCGGCCGGTCAAGCGCACGCGGGTGAAGCTGGCCGACAAA CTGCGCGCCCTTACCTTGCTTGGTTTGCGTCTGGGGTTGTGGAAGCGCCCGGCCGAGGGCGCCCGCTCCCCGGGCTTGGG GGGCGGCTTTGCGGGGGGCGGCCTGTCGGCCCTGCTCGCCGAGGCGACCCGTCTCGCCCAGGAAGGGGCGGTGAACCAAG AAGCCCGGGAAGGGGCGCAAGAAACCCGGGAGGGGGCGGTGGAGAACCTGGGGGAGTGCGATGGCGACGCTTCGTGA
Upstream 100 bases:
>100_bases GACTGCGGGGATACCCTGAGATAATGTCTTTTCATCATTAAATCTTCGTCGCGCGCTTCGGACGATGAACGTCCGGGCAT CCTCCCTTGCGAAGGGCGCT
Downstream 100 bases:
>100_bases GGATAGCCGCCTAGCGCCCGTCGATCTGGCCGCTTACGGCCGGTTGCGGGGCCTGTGGCGGGCCGATCCGGTGCTTTATG CCCGCCAGCGCCTGGGGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MAQSPNDVDPRLPALSPAERRFVACYLANGRKGAKAWREAVEAGAAPRVASRKAAAWLARDPVRAALARAERRARARTGA VIERYAITEERVLSELASLAFSRPMDLMRVTADGGAVVDLSALDERQAAAIAELTVDEYVAGKGEEARPVKRTRVKLADK LRALTLLGLRLGLWKRPAEGARSPGLGGGFAGGGLSALLAEATRLAQEGAVNQEAREGAQETREGAVENLGECDGDAS
Sequences:
>Translated_238_residues MAQSPNDVDPRLPALSPAERRFVACYLANGRKGAKAWREAVEAGAAPRVASRKAAAWLARDPVRAALARAERRARARTGA VIERYAITEERVLSELASLAFSRPMDLMRVTADGGAVVDLSALDERQAAAIAELTVDEYVAGKGEEARPVKRTRVKLADK LRALTLLGLRLGLWKRPAEGARSPGLGGGFAGGGLSALLAEATRLAQEGAVNQEAREGAQETREGAVENLGECDGDAS >Mature_237_residues AQSPNDVDPRLPALSPAERRFVACYLANGRKGAKAWREAVEAGAAPRVASRKAAAWLARDPVRAALARAERRARARTGAV IERYAITEERVLSELASLAFSRPMDLMRVTADGGAVVDLSALDERQAAAIAELTVDEYVAGKGEEARPVKRTRVKLADKL RALTLLGLRLGLWKRPAEGARSPGLGGGFAGGGLSALLAEATRLAQEGAVNQEAREGAQETREGAVENLGECDGDAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25180; Mature: 25049
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQSPNDVDPRLPALSPAERRFVACYLANGRKGAKAWREAVEAGAAPRVASRKAAAWLAR CCCCCCCCCCCCCCCCHHHHHEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH DPVRAALARAERRARARTGAVIERYAITEERVLSELASLAFSRPMDLMRVTADGGAVVDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCEEEH SALDERQAAAIAELTVDEYVAGKGEEARPVKRTRVKLADKLRALTLLGLRLGLWKRPAEG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ARSPGLGGGFAGGGLSALLAEATRLAQEGAVNQEAREGAQETREGAVENLGECDGDAS CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AQSPNDVDPRLPALSPAERRFVACYLANGRKGAKAWREAVEAGAAPRVASRKAAAWLAR CCCCCCCCCCCCCCCHHHHHEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH DPVRAALARAERRARARTGAVIERYAITEERVLSELASLAFSRPMDLMRVTADGGAVVDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCEEEH SALDERQAAAIAELTVDEYVAGKGEEARPVKRTRVKLADKLRALTLLGLRLGLWKRPAEG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ARSPGLGGGFAGGGLSALLAEATRLAQEGAVNQEAREGAQETREGAVENLGECDGDAS CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA