| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593922
Identifier: 83593922
GI number: 83593922
Start: 3009948
End: 3011465
Strand: Reverse
Name: 83593922
Synonym: Rru_A2590
Alternate gene names: NA
Gene position: 3011465-3009948 (Counterclockwise)
Preceding gene: 83593923
Following gene: 83593921
Centisome position: 69.18
GC content: 72.46
Gene sequence:
>1518_bases TTGCGGGGCCTGTGGCGGGCCGATCCGGTGCTTTATGCCCGCCAGCGCCTGGGGATGGTGCCCACGGCCCAGCAAGCCGG CCTGCTGAGCGCCATCGCCCCCGCCGGGGCCAAGGTCACGGTGCGCGCTGGCCATGGGGTGGGCAAGACCACGGCAACGG CGGCGGCGATCTGGTGGCATTTGGAGTGCTTCGATTATTCGAAAACTCCCTGCACGGCGCCAACCGCCAGCCAGCTTGAA CAAATCCTGTGGTCCGAACTGGCCAGGCTGCGCCGGCGCGCCGATGCGCGGGCGCAAGGCACCGGCCTGCCGGCGGCCCT GCGGCTGGAGGCCTTGTTCGCGGTGTCGGGCCGGGCGATCGCCGATCGCGGCACGCCCCGCGAATGGTTCGTCGTCGCCC GCACCGCCCGGCGCGATCAGCCCGACGCCCTGCAGGGCTTCCACGCCTCGGATATCGATCTGGAGGCCGGCGCCGGGCCG CGACTTTCGGCCAAAAGCGGCGGGGCGGCCTTGATGTTCGTTATCGAGGAGGCCTCGGGCGTGCCTGACGCCGTGTTCGA GGTCGCCGAGGGCGCCTTGTCGAGCCCGGGCGCCCGCTTGCTGATGGTCGGCAATCCAACCCGCAACACCGGCTTCTTCG CCCGCTCGCACAAGCGCGACCGCGCCTCGTTCACCGCCTTGCGCTTGCGCTGCGCCGACAGTCCGCTGGTCGATCCCGGC TACCGCGCCGGTTTGGTGCGCAAATACGGCGCCGAGTCGAACGTGGTGCGGGTGCGCGCCGATGGCGCCTTTCCCCGCCA GGATGACGACGTGCTGATCGCCCTGGAAACCGCCGAGGCGGCACTGGCCCGCCCCTTGCCCGCCCGCATGGCCACCGAGG ACGAGCGCCGGCTGGGGGTGGATGTGGCGCGCTTTGGCGATGACCGCACGGTGTTTCTGCTGCGGATCGGGCCGGTTGTC GGCGCGATCGAGGTGACGGCGGGGCGCGACACCATGGCGGTTGCCGGGCGGGCGCGGCGGCTGGCCGAGATCTGGCGGGC CGGGCGCATCTATGTCGATGAGATCGGCGTCGGCGCCGGGGTTGTCGATCGGTTGCGCGAGGACGGCGCGCCGGTGGTGG CGGTCAATGTCGCCGCCAGCGCCCCGGAGCGGGCGGCGGGCGAGGAGCGCGGCCGGCTGCTGCGCGATCACCTGTGGCTG ATGGTGCGCGGCTGGCTGCGCGACGAGGCCCCGGTCTTCGCCGGGCCCGGCGGCGGTCCCGCTTCCGGGTCAGCCGCCGG CCTTCTCTCCGGGATGGGCAGTTGTCTCGTCCCCGGCGTGGACGCCGATCTGGCCCAGGATCTCGCCGGCGAACTGGCCA CCCCGCGCTACGCCTTCGATGGCTCGGGGCGGGTGGTGGTGGAAAGCAAGGATGCGATGAAGCGCCGGGGCTTGCGCAGT CCCGATCTGGCCGACGCCCTGGCCCTGACCTTTCACGAAGCCGCCGCCGCTGGGCGGGTGGCCAAGCTGAGGTGGTAG
Upstream 100 bases:
>100_bases GAAACCCGGGAGGGGGCGGTGGAGAACCTGGGGGAGTGCGATGGCGACGCTTCGTGAGGATAGCCGCCTAGCGCCCGTCG ATCTGGCCGCTTACGGCCGG
Downstream 100 bases:
>100_bases ATCCGATGCCCGATCCCGTGCCCGACCTTGTGACCGCGCCGGCCGATCCGGCCCGCCCCACCGCCGATTATCTGGCCTGC GCCCCCCATTGGGCGATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 505; Mature: 505
Protein sequence:
>505_residues MRGLWRADPVLYARQRLGMVPTAQQAGLLSAIAPAGAKVTVRAGHGVGKTTATAAAIWWHLECFDYSKTPCTAPTASQLE QILWSELARLRRRADARAQGTGLPAALRLEALFAVSGRAIADRGTPREWFVVARTARRDQPDALQGFHASDIDLEAGAGP RLSAKSGGAALMFVIEEASGVPDAVFEVAEGALSSPGARLLMVGNPTRNTGFFARSHKRDRASFTALRLRCADSPLVDPG YRAGLVRKYGAESNVVRVRADGAFPRQDDDVLIALETAEAALARPLPARMATEDERRLGVDVARFGDDRTVFLLRIGPVV GAIEVTAGRDTMAVAGRARRLAEIWRAGRIYVDEIGVGAGVVDRLREDGAPVVAVNVAASAPERAAGEERGRLLRDHLWL MVRGWLRDEAPVFAGPGGGPASGSAAGLLSGMGSCLVPGVDADLAQDLAGELATPRYAFDGSGRVVVESKDAMKRRGLRS PDLADALALTFHEAAAAGRVAKLRW
Sequences:
>Translated_505_residues MRGLWRADPVLYARQRLGMVPTAQQAGLLSAIAPAGAKVTVRAGHGVGKTTATAAAIWWHLECFDYSKTPCTAPTASQLE QILWSELARLRRRADARAQGTGLPAALRLEALFAVSGRAIADRGTPREWFVVARTARRDQPDALQGFHASDIDLEAGAGP RLSAKSGGAALMFVIEEASGVPDAVFEVAEGALSSPGARLLMVGNPTRNTGFFARSHKRDRASFTALRLRCADSPLVDPG YRAGLVRKYGAESNVVRVRADGAFPRQDDDVLIALETAEAALARPLPARMATEDERRLGVDVARFGDDRTVFLLRIGPVV GAIEVTAGRDTMAVAGRARRLAEIWRAGRIYVDEIGVGAGVVDRLREDGAPVVAVNVAASAPERAAGEERGRLLRDHLWL MVRGWLRDEAPVFAGPGGGPASGSAAGLLSGMGSCLVPGVDADLAQDLAGELATPRYAFDGSGRVVVESKDAMKRRGLRS PDLADALALTFHEAAAAGRVAKLRW >Mature_505_residues MRGLWRADPVLYARQRLGMVPTAQQAGLLSAIAPAGAKVTVRAGHGVGKTTATAAAIWWHLECFDYSKTPCTAPTASQLE QILWSELARLRRRADARAQGTGLPAALRLEALFAVSGRAIADRGTPREWFVVARTARRDQPDALQGFHASDIDLEAGAGP RLSAKSGGAALMFVIEEASGVPDAVFEVAEGALSSPGARLLMVGNPTRNTGFFARSHKRDRASFTALRLRCADSPLVDPG YRAGLVRKYGAESNVVRVRADGAFPRQDDDVLIALETAEAALARPLPARMATEDERRLGVDVARFGDDRTVFLLRIGPVV GAIEVTAGRDTMAVAGRARRLAEIWRAGRIYVDEIGVGAGVVDRLREDGAPVVAVNVAASAPERAAGEERGRLLRDHLWL MVRGWLRDEAPVFAGPGGGPASGSAAGLLSGMGSCLVPGVDADLAQDLAGELATPRYAFDGSGRVVVESKDAMKRRGLRS PDLADALALTFHEAAAAGRVAKLRW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53583; Mature: 53583
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGLWRADPVLYARQRLGMVPTAQQAGLLSAIAPAGAKVTVRAGHGVGKTTATAAAIWWH CCCCCCCCHHHHHHHHCCCCCCHHHCCHHHHHCCCCCEEEEEECCCCCCHHHHHEEEEEE LECFDYSKTPCTAPTASQLEQILWSELARLRRRADARAQGTGLPAALRLEALFAVSGRAI EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEE ADRGTPREWFVVARTARRDQPDALQGFHASDIDLEAGAGPRLSAKSGGAALMFVIEEASG ECCCCCCEEEEEEECCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEECCCC VPDAVFEVAEGALSSPGARLLMVGNPTRNTGFFARSHKRDRASFTALRLRCADSPLVDPG CCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEECCCCCHHHHEEEEEEEECCCCCCCCC YRAGLVRKYGAESNVVRVRADGAFPRQDDDVLIALETAEAALARPLPARMATEDERRLGV HHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECHHHHHHCCCCCHHCCCCHHHHCC DVARFGDDRTVFLLRIGPVVGAIEVTAGRDTMAVAGRARRLAEIWRAGRIYVDEIGVGAG CHHHCCCCCEEEEEEECCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHH VVDRLREDGAPVVAVNVAASAPERAAGEERGRLLRDHLWLMVRGWLRDEAPVFAGPGGGP HHHHHHHCCCCEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC ASGSAAGLLSGMGSCLVPGVDADLAQDLAGELATPRYAFDGSGRVVVESKDAMKRRGLRS CCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCEEEEECHHHHHHCCCCC PDLADALALTFHEAAAAGRVAKLRW CCHHHHHHHHHHHHHHCCCEEECCC >Mature Secondary Structure MRGLWRADPVLYARQRLGMVPTAQQAGLLSAIAPAGAKVTVRAGHGVGKTTATAAAIWWH CCCCCCCCHHHHHHHHCCCCCCHHHCCHHHHHCCCCCEEEEEECCCCCCHHHHHEEEEEE LECFDYSKTPCTAPTASQLEQILWSELARLRRRADARAQGTGLPAALRLEALFAVSGRAI EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEE ADRGTPREWFVVARTARRDQPDALQGFHASDIDLEAGAGPRLSAKSGGAALMFVIEEASG ECCCCCCEEEEEEECCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEECCCC VPDAVFEVAEGALSSPGARLLMVGNPTRNTGFFARSHKRDRASFTALRLRCADSPLVDPG CCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEECCCCCHHHHEEEEEEEECCCCCCCCC YRAGLVRKYGAESNVVRVRADGAFPRQDDDVLIALETAEAALARPLPARMATEDERRLGV HHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECHHHHHHCCCCCHHCCCCHHHHCC DVARFGDDRTVFLLRIGPVVGAIEVTAGRDTMAVAGRARRLAEIWRAGRIYVDEIGVGAG CHHHCCCCCEEEEEEECCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHH VVDRLREDGAPVVAVNVAASAPERAAGEERGRLLRDHLWLMVRGWLRDEAPVFAGPGGGP HHHHHHHCCCCEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC ASGSAAGLLSGMGSCLVPGVDADLAQDLAGELATPRYAFDGSGRVVVESKDAMKRRGLRS CCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCEEEEECHHHHHHCCCCC PDLADALALTFHEAAAAGRVAKLRW CCHHHHHHHHHHHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA