| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593892
Identifier: 83593892
GI number: 83593892
Start: 2973629
End: 2974636
Strand: Reverse
Name: 83593892
Synonym: Rru_A2557
Alternate gene names: NA
Gene position: 2974636-2973629 (Counterclockwise)
Preceding gene: 83593898
Following gene: 83593891
Centisome position: 68.34
GC content: 69.35
Gene sequence:
>1008_bases ATGGCCCTGCGCACCCCCTACTTGCTGTTTCTCGGCGATGCCGCCGATCAACTGGCGGCCAAGACCGCCAACGGCATTCG CCAATGGCGGCCTGACTGGTGCCTCGGCCAGCTCCGCCTGGAGGGCTGCAAGGCCGATCTCGGCCTGCCCGACCTGACCT TGGAAGAGGCCAAGGCCGTGGGCGTTCAGACCTTGGTTCTGGGCGTCGCCAACCGGGGTGGCGTGATCGGCGAAAGCTGG CAGGCCGTTTTGTTCCGCGCCATCGACTTGGGCATGGACATCGCCGCCGGCCTGCATCAGCGCCTGACCGAGGTGCCGGG GCTGGCCGAAGCCGCCGCCAAGGCCGGAGTCGCCCTCCATGACGTGCGCCACCCGACCGGGACGCTCAAGGTCGCCTCGG GCCTGCGGCGTCCGGGCAAGCGGGTGCTGGCCGTCGGCACCGATTGCTCGGTCGGCAAGATGTACACCATGCTGGCGATG GAGCGCGAGATGAAGGCCCGGGGCTGGGCCGCCGATTTCCGCGCCACCGGCCAGACCGGCATCCTGATCGCCGGCGGCGG CATCTCGGTCGACGCCGTGGTCGCCGATTTCATCAGCGGCGCGGCCGAAGCCCTGGCACCGGCCGCCGAGGCCGATCATT GGGATCTGGTCGAAGGCCAAGGCTCGCTGTTCCATGCCTCCTATGCCGGCGTCAGCCTGGGCCTGCTCCATGGCGCCCAG CCCGATTGGCTGGTGATCTGCCACGAGCCCGACCGCCCGCATATGCGTGGCCTGCCCGGCAAGGCGCTGCCCGATCTGGA AAGCTGCATGGCGCTCAATCTCGAATGCGCCAAGCTGACCAACCCCGGCGTTCAGGTTCTGGGCTTCGCCTTCAACACCT CGGCGCTCGATGACGCCGCCGCCAAGGCCTTGCTGGCCGAGACTTCGGCGCGCTTCGCTCTGCCCTGCGTCGATCCGGTG CGCGGGGGTGTCGCCGCCCTGGTCGATCGTCTGGCCGAGAAGGGCTGA
Upstream 100 bases:
>100_bases GCGATCGCCGAATGCGGAGGCTACCGTCCCTGTGAAACCGTCCGATCGGCCTTCGCCGACGGGCATTCTCTCCTGTCGTT CTCCCTTGAAGAGGTCTCCG
Downstream 100 bases:
>100_bases TCCCATGACAAAGCCCCGGCTGATCATCCGCGACGAGGTTTGGCCCATCGCCGGCTCCTTCGTGATTTCCCGCGGTGCCA AGACCGCCGCCCATGTGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MALRTPYLLFLGDAADQLAAKTANGIRQWRPDWCLGQLRLEGCKADLGLPDLTLEEAKAVGVQTLVLGVANRGGVIGESW QAVLFRAIDLGMDIAAGLHQRLTEVPGLAEAAAKAGVALHDVRHPTGTLKVASGLRRPGKRVLAVGTDCSVGKMYTMLAM EREMKARGWAADFRATGQTGILIAGGGISVDAVVADFISGAAEALAPAAEADHWDLVEGQGSLFHASYAGVSLGLLHGAQ PDWLVICHEPDRPHMRGLPGKALPDLESCMALNLECAKLTNPGVQVLGFAFNTSALDDAAAKALLAETSARFALPCVDPV RGGVAALVDRLAEKG
Sequences:
>Translated_335_residues MALRTPYLLFLGDAADQLAAKTANGIRQWRPDWCLGQLRLEGCKADLGLPDLTLEEAKAVGVQTLVLGVANRGGVIGESW QAVLFRAIDLGMDIAAGLHQRLTEVPGLAEAAAKAGVALHDVRHPTGTLKVASGLRRPGKRVLAVGTDCSVGKMYTMLAM EREMKARGWAADFRATGQTGILIAGGGISVDAVVADFISGAAEALAPAAEADHWDLVEGQGSLFHASYAGVSLGLLHGAQ PDWLVICHEPDRPHMRGLPGKALPDLESCMALNLECAKLTNPGVQVLGFAFNTSALDDAAAKALLAETSARFALPCVDPV RGGVAALVDRLAEKG >Mature_334_residues ALRTPYLLFLGDAADQLAAKTANGIRQWRPDWCLGQLRLEGCKADLGLPDLTLEEAKAVGVQTLVLGVANRGGVIGESWQ AVLFRAIDLGMDIAAGLHQRLTEVPGLAEAAAKAGVALHDVRHPTGTLKVASGLRRPGKRVLAVGTDCSVGKMYTMLAME REMKARGWAADFRATGQTGILIAGGGISVDAVVADFISGAAEALAPAAEADHWDLVEGQGSLFHASYAGVSLGLLHGAQP DWLVICHEPDRPHMRGLPGKALPDLESCMALNLECAKLTNPGVQVLGFAFNTSALDDAAAKALLAETSARFALPCVDPVR GGVAALVDRLAEKG
Specific function: Unknown
COG id: COG3367
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35008; Mature: 34877
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALRTPYLLFLGDAADQLAAKTANGIRQWRPDWCLGQLRLEGCKADLGLPDLTLEEAKAV CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHEECCCCCCCCCCCCCHHHHHHH GVQTLVLGVANRGGVIGESWQAVLFRAIDLGMDIAAGLHQRLTEVPGLAEAAAKAGVALH HHHHHEEECCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHCCCHHH DVRHPTGTLKVASGLRRPGKRVLAVGTDCSVGKMYTMLAMEREMKARGWAADFRATGQTG HCCCCCCHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCE ILIAGGGISVDAVVADFISGAAEALAPAAEADHWDLVEGQGSLFHASYAGVSLGLLHGAQ EEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEHHCCCEEEHHCCCC PDWLVICHEPDRPHMRGLPGKALPDLESCMALNLECAKLTNPGVQVLGFAFNTSALDDAA CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCEECCCCCCEEEEEEECCCHHHHHH AKALLAETSARFALPCVDPVRGGVAALVDRLAEKG HHHHHHHCCCCEECCCCCHHCCCHHHHHHHHHHCC >Mature Secondary Structure ALRTPYLLFLGDAADQLAAKTANGIRQWRPDWCLGQLRLEGCKADLGLPDLTLEEAKAV CCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHEECCCCCCCCCCCCCHHHHHHH GVQTLVLGVANRGGVIGESWQAVLFRAIDLGMDIAAGLHQRLTEVPGLAEAAAKAGVALH HHHHHEEECCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHCCCHHH DVRHPTGTLKVASGLRRPGKRVLAVGTDCSVGKMYTMLAMEREMKARGWAADFRATGQTG HCCCCCCHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCE ILIAGGGISVDAVVADFISGAAEALAPAAEADHWDLVEGQGSLFHASYAGVSLGLLHGAQ EEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEHHCCCEEEHHCCCC PDWLVICHEPDRPHMRGLPGKALPDLESCMALNLECAKLTNPGVQVLGFAFNTSALDDAA CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCEECCCCCCEEEEEEECCCHHHHHH AKALLAETSARFALPCVDPVRGGVAALVDRLAEKG HHHHHHHCCCCEECCCCCHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA