| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593798
Identifier: 83593798
GI number: 83593798
Start: 2862473
End: 2863288
Strand: Reverse
Name: 83593798
Synonym: Rru_A2463
Alternate gene names: NA
Gene position: 2863288-2862473 (Counterclockwise)
Preceding gene: 83593802
Following gene: 83593797
Centisome position: 65.78
GC content: 67.4
Gene sequence:
>816_bases ATGACGGACCGTCCTTCCCCGCTTTCCCCCGCTCCCTCCCTCCTCGCCGACGACGAACCCCCGCCCTTCGTCGTTCTCAA TCCCGAGGCGACCCGACCACTACTGCTGATCTGCGACCATGCCGCCAACCGCGTGCCCCGGGCCCTGGCCGGGCTGGGGC TGGAGGCCGATACCCTGGGTCTGCATATCGGCTGGGATATCGGCGCGGCGGCGGTGACCGAGCTTTTGGCCAAGCGTTTC GCCGCTTGCGCCATGTTCGCCTGCTATTCCCGCTTGGTGATCGATTGCAATCGGGCGCCGGGCGATCCGTCGTCGATCCC GGCGGTGTCCGATGGCATCGCCATTCCCGGCAATGAGGGGCTGGACGAGGCGGAGGCGCGCAGGCGCACCGAAAGCCTGT TCTGGCCCTATCACCACGAGATCGGCGAACGCATCGCCCATCTGTGGCGTCAGGGGCGGCCGCCGGCGGTGGTCTCCATC CATAGTTTCACCCCGGTCCTGGGCGGCGTGGAACGACCCTGGCATCTGGGGTTTCTTTATAACCACGACGACCGGATGAC CCGTCGGCTGATCGACACCCTGGCGCGGCGCGCGCCCGAGGTCATCGTCGGCGAGAACGAACCCTATTCGGGCAAGGATA TCGGCTTCACCATCAATACCCATGCCGAGCCCGCCGGCCTGCCCAGCCTCGGCGTCGAGATCCGTCAGGATCTTTTGGCC GACGCCGCCGGGATCGGGCGCTGGGCCGGGGTGCTGGGCGAGGCTTTGGCCGAGGTACTGGCCGACGAGGGGCTTTATGT GCGGCGGATGACCTGA
Upstream 100 bases:
>100_bases CGCCAAAACGCCCGAGTCCGGGCAAAGGGTGGCTTTTCGCCGATGGCTTGTCCTAATCTCGGACTCCCGATTTCTCTGGC TTTAAGGGCTTGCCCCGGCA
Downstream 100 bases:
>100_bases GCGGGGTCGGCGTCGCTAGCCTCCGATGGCGCCAAAACAAAAAAGGAAACGCCCATGCGCGAACCGGCTTTTACGGTGGG GATCGAGGAGGAGTACCTGT
Product: N-formylglutamate amidohydrolase
Products: NA
Alternate protein names: N-Formylglutamate Amidohydrolase Family Protein; N-Formylglutamate Amidohydrolase Protein; N-Formylglutamate Amidohydrolase Superfamily; Cytoplasmic Protein; Hydrolase
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MTDRPSPLSPAPSLLADDEPPPFVVLNPEATRPLLLICDHAANRVPRALAGLGLEADTLGLHIGWDIGAAAVTELLAKRF AACAMFACYSRLVIDCNRAPGDPSSIPAVSDGIAIPGNEGLDEAEARRRTESLFWPYHHEIGERIAHLWRQGRPPAVVSI HSFTPVLGGVERPWHLGFLYNHDDRMTRRLIDTLARRAPEVIVGENEPYSGKDIGFTINTHAEPAGLPSLGVEIRQDLLA DAAGIGRWAGVLGEALAEVLADEGLYVRRMT
Sequences:
>Translated_271_residues MTDRPSPLSPAPSLLADDEPPPFVVLNPEATRPLLLICDHAANRVPRALAGLGLEADTLGLHIGWDIGAAAVTELLAKRF AACAMFACYSRLVIDCNRAPGDPSSIPAVSDGIAIPGNEGLDEAEARRRTESLFWPYHHEIGERIAHLWRQGRPPAVVSI HSFTPVLGGVERPWHLGFLYNHDDRMTRRLIDTLARRAPEVIVGENEPYSGKDIGFTINTHAEPAGLPSLGVEIRQDLLA DAAGIGRWAGVLGEALAEVLADEGLYVRRMT >Mature_270_residues TDRPSPLSPAPSLLADDEPPPFVVLNPEATRPLLLICDHAANRVPRALAGLGLEADTLGLHIGWDIGAAAVTELLAKRFA ACAMFACYSRLVIDCNRAPGDPSSIPAVSDGIAIPGNEGLDEAEARRRTESLFWPYHHEIGERIAHLWRQGRPPAVVSIH SFTPVLGGVERPWHLGFLYNHDDRMTRRLIDTLARRAPEVIVGENEPYSGKDIGFTINTHAEPAGLPSLGVEIRQDLLAD AAGIGRWAGVLGEALAEVLADEGLYVRRMT
Specific function: Unknown
COG id: COG3931
COG function: function code E; Predicted N-formylglutamate amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29362; Mature: 29231
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRPSPLSPAPSLLADDEPPPFVVLNPEATRPLLLICDHAANRVPRALAGLGLEADTLG CCCCCCCCCCCCHHHCCCCCCCEEEECCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCEE LHIGWDIGAAAVTELLAKRFAACAMFACYSRLVIDCNRAPGDPSSIPAVSDGIAIPGNEG EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEECCCCCC LDEAEARRRTESLFWPYHHEIGERIAHLWRQGRPPAVVSIHSFTPVLGGVERPWHLGFLY CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHCCCCCCEEEEEEE NHDDRMTRRLIDTLARRAPEVIVGENEPYSGKDIGFTINTHAEPAGLPSLGVEIRQDLLA CCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHH DAAGIGRWAGVLGEALAEVLADEGLYVRRMT HHHHHHHHHHHHHHHHHHHHHCCCEEEEECC >Mature Secondary Structure TDRPSPLSPAPSLLADDEPPPFVVLNPEATRPLLLICDHAANRVPRALAGLGLEADTLG CCCCCCCCCCCHHHCCCCCCCEEEECCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCEE LHIGWDIGAAAVTELLAKRFAACAMFACYSRLVIDCNRAPGDPSSIPAVSDGIAIPGNEG EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEECCCCCC LDEAEARRRTESLFWPYHHEIGERIAHLWRQGRPPAVVSIHSFTPVLGGVERPWHLGFLY CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHCCCCCCEEEEEEE NHDDRMTRRLIDTLARRAPEVIVGENEPYSGKDIGFTINTHAEPAGLPSLGVEIRQDLLA CCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHH DAAGIGRWAGVLGEALAEVLADEGLYVRRMT HHHHHHHHHHHHHHHHHHHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA