Click here to switch to the map view.

The map label for this gene is rpmJ [H]

Identifier: 83593802

GI number: 83593802

Start: 2866924

End: 2867100

Strand: Reverse

Name: rpmJ [H]

Synonym: Rru_A2467

Alternate gene names: 83593802

Gene position: 2867100-2866924 (Counterclockwise)

Preceding gene: 83593807

Following gene: 83593798

Centisome position: 65.87

GC content: 63.28

Gene sequence:

>177_bases
ATGTCCGCTTCTCGCGCGCGGGACCGGCTCCAGCCGGACGAGGATAGTGTCATGCGTGTCCGCAATTCCCTGAAGTCGGC
CAAGGTGCGCGACAAGAACTGCCGCGTCGTGCGCCGCAAGGGCCGCGTCTTCGTGATCAACAAGAAGAACCCGCGCTTCA
AGGTTCGTCAGGGCTGA

Upstream 100 bases:

>100_bases
CGCCGAGGCCGGCCAAAATCAGTTTGACTCATAAAGGGAGCGCCCTTATGGTCCCGGCTCCCATTTCATCAGTGGGCTGG
TCGAGCCGGCCGGGGGAAGC

Downstream 100 bases:

>100_bases
TTGGCGCCGGCTTCGGCCGGCATCGCCTCTGAGCTTATGCTATAAAAGCCGCGTCCGGATCTTCCCCCAAGGAAAGATCC
GGACGCGGCTTTTTGGCGTT

Product: 50S ribosomal protein L36P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 58; Mature: 57

Protein sequence:

>58_residues
MSASRARDRLQPDEDSVMRVRNSLKSAKVRDKNCRVVRRKGRVFVINKKNPRFKVRQG

Sequences:

>Translated_58_residues
MSASRARDRLQPDEDSVMRVRNSLKSAKVRDKNCRVVRRKGRVFVINKKNPRFKVRQG
>Mature_57_residues
SASRARDRLQPDEDSVMRVRNSLKSAKVRDKNCRVVRRKGRVFVINKKNPRFKVRQG

Specific function: Unknown

COG id: COG0257

COG function: function code J; Ribosomal protein L36

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L36P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000473 [H]

Pfam domain/function: PF00444 Ribosomal_L36 [H]

EC number: NA

Molecular weight: Translated: 6841; Mature: 6710

Theoretical pI: Translated: 12.38; Mature: 12.38

Prosite motif: PS00828 RIBOSOMAL_L36

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASRARDRLQPDEDSVMRVRNSLKSAKVRDKNCRVVRRKGRVFVINKKNPRFKVRQG
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCCCEEECCC
>Mature Secondary Structure 
SASRARDRLQPDEDSVMRVRNSLKSAKVRDKNCRVVRRKGRVFVINKKNPRFKVRQG
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA