| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593681
Identifier: 83593681
GI number: 83593681
Start: 2719717
End: 2720619
Strand: Reverse
Name: 83593681
Synonym: Rru_A2346
Alternate gene names: NA
Gene position: 2720619-2719717 (Counterclockwise)
Preceding gene: 83593682
Following gene: 83593680
Centisome position: 62.5
GC content: 68.66
Gene sequence:
>903_bases ATGACGCCGGCAGATTCCAAAGACTGGCTTTTCGCCGCGGTCGCCCTGACCACCGCCGCCACCCATCCGGCGGTGGCCGC CGAAGGTCCCAAGGTCGGGGTGGTCACCGGCGCGGTATCGTCGACCCGGGGGGTGAGCGGCGCGCCGACCAATACGACGG CGGTGGTTCTGGGTGATGGCGTTCAAGCCGGGGAGACCCTGCGCACCGGTCCCAACGGCATCATTCACATTTTGTTTCTC GACCAATCCTCGGTGACCCTCGGCCCGGGGTCCAGCCTGACCCTTGACAGTTTTTCCCATGATCCGTCCACGCGCAGCGG CAAGATCGCCATGACCCTGCACGAGGGCAGCTTGCGCGTCGTCGGGGGAATGAACAGCAAGTCCAACGAGACGGAAGTCC GCACGGCTGGCGGCACGGTTGGTATTCTCGGCGGCATCAGCATCGTTGAAAGCCGTGGGCAAAGCACCTCGGCGACCTTC CTCTTCGGCCAGCAGATGCGGGTGACCGACCAAAGCGGCGCCACCCAAACCGTGCTGCGCCCTGGATTCTCGGTGACGAG TTCCCAAAACGGCGTGGGATCGCCCCAAAGCGCCCCCCCCCAGCAGCTTTCCAGCCTGACCAGCCGCTTCGAGGGGACGA CGGGGCAGGGGGGCGGTGCCCCTGCGTCAGCGGCGCCCCCCTCGGCGCCCTCGGCGCCGCAAGCGCCGCTGATCGCCACC AGCGACCGGCCGGCTGGCCAGGGTGTGCCGACCTCCGGCCTAGCGCAGGATCGTCTGAGCAACCCCAATTCCGCCCTGGT TGGCGCCGCCATGGGCTCCAGCCGGCCCGATGCCGTCGCCGATGTCGATAGCGCCCCGCCCATCAACGCCGTGCGGACGA CGCCCCCGGTCGCCACCTCCTAG
Upstream 100 bases:
>100_bases CTACTCTTATAATAACTTTATGGCCTCGAGCAGTTTCGTTTTCAATTTCTGACGAAACGGCGCTTTCCGGTGGAAGCCGG AACCGGGTGGAGCAAAACAG
Downstream 100 bases:
>100_bases GGGGGGGTGGCGCCCTCCATGCGCATTCTTCTGTGTTCGTCCTATCCGCATCATCCGCAAACGCGCGGAGGCTTGCAAAG CACCACCGACGAGCTTTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MTPADSKDWLFAAVALTTAATHPAVAAEGPKVGVVTGAVSSTRGVSGAPTNTTAVVLGDGVQAGETLRTGPNGIIHILFL DQSSVTLGPGSSLTLDSFSHDPSTRSGKIAMTLHEGSLRVVGGMNSKSNETEVRTAGGTVGILGGISIVESRGQSTSATF LFGQQMRVTDQSGATQTVLRPGFSVTSSQNGVGSPQSAPPQQLSSLTSRFEGTTGQGGGAPASAAPPSAPSAPQAPLIAT SDRPAGQGVPTSGLAQDRLSNPNSALVGAAMGSSRPDAVADVDSAPPINAVRTTPPVATS
Sequences:
>Translated_300_residues MTPADSKDWLFAAVALTTAATHPAVAAEGPKVGVVTGAVSSTRGVSGAPTNTTAVVLGDGVQAGETLRTGPNGIIHILFL DQSSVTLGPGSSLTLDSFSHDPSTRSGKIAMTLHEGSLRVVGGMNSKSNETEVRTAGGTVGILGGISIVESRGQSTSATF LFGQQMRVTDQSGATQTVLRPGFSVTSSQNGVGSPQSAPPQQLSSLTSRFEGTTGQGGGAPASAAPPSAPSAPQAPLIAT SDRPAGQGVPTSGLAQDRLSNPNSALVGAAMGSSRPDAVADVDSAPPINAVRTTPPVATS >Mature_299_residues TPADSKDWLFAAVALTTAATHPAVAAEGPKVGVVTGAVSSTRGVSGAPTNTTAVVLGDGVQAGETLRTGPNGIIHILFLD QSSVTLGPGSSLTLDSFSHDPSTRSGKIAMTLHEGSLRVVGGMNSKSNETEVRTAGGTVGILGGISIVESRGQSTSATFL FGQQMRVTDQSGATQTVLRPGFSVTSSQNGVGSPQSAPPQQLSSLTSRFEGTTGQGGGAPASAAPPSAPSAPQAPLIATS DRPAGQGVPTSGLAQDRLSNPNSALVGAAMGSSRPDAVADVDSAPPINAVRTTPPVATS
Specific function: Unknown
COG id: COG4254
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29690; Mature: 29559
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPADSKDWLFAAVALTTAATHPAVAAEGPKVGVVTGAVSSTRGVSGAPTNTTAVVLGDG CCCCCCCCCEEEEEHHHHHCCCCCEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECC VQAGETLRTGPNGIIHILFLDQSSVTLGPGSSLTLDSFSHDPSTRSGKIAMTLHEGSLRV CCCCCEEECCCCCEEEEEEECCCCEEECCCCCEEECCCCCCCCCCCCEEEEEEECCCEEE VGGMNSKSNETEVRTAGGTVGILGGISIVESRGQSTSATFLFGQQMRVTDQSGATQTVLR EECCCCCCCCCEEEECCCEEEEECCEEHHHCCCCCCEEEEEECCEEEEECCCCCEEEEEC PGFSVTSSQNGVGSPQSAPPQQLSSLTSRFEGTTGQGGGAPASAAPPSAPSAPQAPLIAT CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE SDRPAGQGVPTSGLAQDRLSNPNSALVGAAMGSSRPDAVADVDSAPPINAVRTTPPVATS CCCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCCEECCCCCCCCCCEECCCCCCCC >Mature Secondary Structure TPADSKDWLFAAVALTTAATHPAVAAEGPKVGVVTGAVSSTRGVSGAPTNTTAVVLGDG CCCCCCCCEEEEEHHHHHCCCCCEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECC VQAGETLRTGPNGIIHILFLDQSSVTLGPGSSLTLDSFSHDPSTRSGKIAMTLHEGSLRV CCCCCEEECCCCCEEEEEEECCCCEEECCCCCEEECCCCCCCCCCCCEEEEEEECCCEEE VGGMNSKSNETEVRTAGGTVGILGGISIVESRGQSTSATFLFGQQMRVTDQSGATQTVLR EECCCCCCCCCEEEECCCEEEEECCEEHHHCCCCCCEEEEEECCEEEEECCCCCEEEEEC PGFSVTSSQNGVGSPQSAPPQQLSSLTSRFEGTTGQGGGAPASAAPPSAPSAPQAPLIAT CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE SDRPAGQGVPTSGLAQDRLSNPNSALVGAAMGSSRPDAVADVDSAPPINAVRTTPPVATS CCCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCCEECCCCCCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA