| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593682
Identifier: 83593682
GI number: 83593682
Start: 2720668
End: 2722044
Strand: Reverse
Name: 83593682
Synonym: Rru_A2347
Alternate gene names: NA
Gene position: 2722044-2720668 (Counterclockwise)
Preceding gene: 83593685
Following gene: 83593681
Centisome position: 62.54
GC content: 62.53
Gene sequence:
>1377_bases ATGCCGCGTCTTCGTCTCATGTCCAGCGCGCTGGTGGGTGGCCTCTTCCTGGGGGTGGCGCCCGTTTTGGCGCAGGAGGC ACCGAGGGCCAATATCGACGCGCAGATCGATCAGGCCTTTGGCGCCGTGCTGGGCAATCCGGCCAACCTGCAGATCGGAC GGACCTACGCCGGTCTTCTGGTCGAAGGCGGCAATTTCGAAGGCGCCATCGCCGCCCTGGAGCGGCTTCTGCTTGATCCG GCGGCCGATCCCTCCATCCGGGTGGAACTGGGTATTCTTTACTACCGCGTCGGCTCTTATGGCATGGCGGAAAGCTACCT GACCACGGCCCTGGCCGATCCCCGGGTGTCCGGGCAGGTGCGCGACGACGCCGAGAAGCTTCTGCGCGACGTGAAGCGGC GCAACGCCCCGGGGGGCAAGCTGAGCGGCGCCGTCTCGATCGGCCTGCGCGGACAAACCAATCCGACGGCCGCCTCATCG GCCGGAAGCCTGAGTTATGGCGGAACCCGGGTGGCGATCCCGGAGCAATCGCGCCGCAACGGCGACTTCGACGTTTTCCT CAACGCCGGGGCCAACCATGAATGGGATCTTGAAACCCAGAACAGCGCCACCGTGGTGACCACCGGCGCGTTGTTTGCCA ATCACTACGGCAATGCCGAAGGCTATGACAGCGACAGCGTGAAGAACGACCCGCAGGATCTGGTGGCGCTCAACGCCACC ACCGGCATCCGTTTCAAGCCGTCGCCGGCCGATGTGCCCGATCTGACCTTGCGGCCTTATATCGGCGCCTCCGAACTGCT GCTCAGCGGCAATCAGTACATGGCCTCAGCGGGGGGCGGTCTGGATATCGCCTATGCGTTCAATGGCGGCGCCACCCTTG TGGGCGCGACCTATGATATCCGCCGCACGTTTTTTGAAGAGCGGGCCGATATCTCGGAATCGGGCGGTCAAAGCGGCTAT GAGCAGTATCTGCAACTGAACGCCGTGCAGGAAGTGGCGCCGCTCAACATCGTTTCGCTCAATCTCACCTTGCGCGACCA TAACGCCGATCGGCCCTATTTCGACTATCAGGGGGTTGAAGCCCGGGTGAGCTATGGCCTGAGCTACCGCAATCCGCTTG GCTGGGACGAGGGGTTCTGGACCTCCAGCGTCTATGGCGGCCCGGTTTGGCGCGCCTACCAGGGCCCCGATCCCGTGGTC GATCCCGCCAGAACCCGCAAGGATGTGGAATGGCGGGTGGGGGCCAGTCAGGCCGTGCCGATTACCCAGGCGGTTTCTTT CTTGTTGGGCGTGGAATACACCACAACGGACTCTAATCTGCCGAACTACTCTTATAATAACTTTATGGCCTCGAGCAGTT TCGTTTTCAATTTCTGA
Upstream 100 bases:
>100_bases TCGGATAAACTAATCTTCCAACAAGGGTAAATCCAGACGCGTCATGGACCGGCTGATGGAAAGCGGGATGGCGGACCGTC GGTAGGGGAGTACCTCGGTG
Downstream 100 bases:
>100_bases CGAAACGGCGCTTTCCGGTGGAAGCCGGAACCGGGTGGAGCAAAACAGATGACGCCGGCAGATTCCAAAGACTGGCTTTT CGCCGCGGTCGCCCTGACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 458; Mature: 457
Protein sequence:
>458_residues MPRLRLMSSALVGGLFLGVAPVLAQEAPRANIDAQIDQAFGAVLGNPANLQIGRTYAGLLVEGGNFEGAIAALERLLLDP AADPSIRVELGILYYRVGSYGMAESYLTTALADPRVSGQVRDDAEKLLRDVKRRNAPGGKLSGAVSIGLRGQTNPTAASS AGSLSYGGTRVAIPEQSRRNGDFDVFLNAGANHEWDLETQNSATVVTTGALFANHYGNAEGYDSDSVKNDPQDLVALNAT TGIRFKPSPADVPDLTLRPYIGASELLLSGNQYMASAGGGLDIAYAFNGGATLVGATYDIRRTFFEERADISESGGQSGY EQYLQLNAVQEVAPLNIVSLNLTLRDHNADRPYFDYQGVEARVSYGLSYRNPLGWDEGFWTSSVYGGPVWRAYQGPDPVV DPARTRKDVEWRVGASQAVPITQAVSFLLGVEYTTTDSNLPNYSYNNFMASSSFVFNF
Sequences:
>Translated_458_residues MPRLRLMSSALVGGLFLGVAPVLAQEAPRANIDAQIDQAFGAVLGNPANLQIGRTYAGLLVEGGNFEGAIAALERLLLDP AADPSIRVELGILYYRVGSYGMAESYLTTALADPRVSGQVRDDAEKLLRDVKRRNAPGGKLSGAVSIGLRGQTNPTAASS AGSLSYGGTRVAIPEQSRRNGDFDVFLNAGANHEWDLETQNSATVVTTGALFANHYGNAEGYDSDSVKNDPQDLVALNAT TGIRFKPSPADVPDLTLRPYIGASELLLSGNQYMASAGGGLDIAYAFNGGATLVGATYDIRRTFFEERADISESGGQSGY EQYLQLNAVQEVAPLNIVSLNLTLRDHNADRPYFDYQGVEARVSYGLSYRNPLGWDEGFWTSSVYGGPVWRAYQGPDPVV DPARTRKDVEWRVGASQAVPITQAVSFLLGVEYTTTDSNLPNYSYNNFMASSSFVFNF >Mature_457_residues PRLRLMSSALVGGLFLGVAPVLAQEAPRANIDAQIDQAFGAVLGNPANLQIGRTYAGLLVEGGNFEGAIAALERLLLDPA ADPSIRVELGILYYRVGSYGMAESYLTTALADPRVSGQVRDDAEKLLRDVKRRNAPGGKLSGAVSIGLRGQTNPTAASSA GSLSYGGTRVAIPEQSRRNGDFDVFLNAGANHEWDLETQNSATVVTTGALFANHYGNAEGYDSDSVKNDPQDLVALNATT GIRFKPSPADVPDLTLRPYIGASELLLSGNQYMASAGGGLDIAYAFNGGATLVGATYDIRRTFFEERADISESGGQSGYE QYLQLNAVQEVAPLNIVSLNLTLRDHNADRPYFDYQGVEARVSYGLSYRNPLGWDEGFWTSSVYGGPVWRAYQGPDPVVD PARTRKDVEWRVGASQAVPITQAVSFLLGVEYTTTDSNLPNYSYNNFMASSSFVFNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49189; Mature: 49058
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLRLMSSALVGGLFLGVAPVLAQEAPRANIDAQIDQAFGAVLGNPANLQIGRTYAGLL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEECCEEEEEE VEGGNFEGAIAALERLLLDPAADPSIRVELGILYYRVGSYGMAESYLTTALADPRVSGQV EECCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCC RDDAEKLLRDVKRRNAPGGKLSGAVSIGLRGQTNPTAASSAGSLSYGGTRVAIPEQSRRN HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCHHCCC GDFDVFLNAGANHEWDLETQNSATVVTTGALFANHYGNAEGYDSDSVKNDPQDLVALNAT CCEEEEEECCCCCCCCCCCCCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCCCEEEEECC TGIRFKPSPADVPDLTLRPYIGASELLLSGNQYMASAGGGLDIAYAFNGGATLVGATYDI CCCEECCCCCCCCCCEECCCCCHHHHEECCCEEEEECCCCEEEEEEECCCEEEEECHHHH RRTFFEERADISESGGQSGYEQYLQLNAVQEVAPLNIVSLNLTLRDHNADRPYFDYQGVE HHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCCE ARVSYGLSYRNPLGWDEGFWTSSVYGGPVWRAYQGPDPVVDPARTRKDVEWRVGASQAVP EEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHCCCCCEEEECCCCCCC ITQAVSFLLGVEYTTTDSNLPNYSYNNFMASSSFVFNF HHHHHHHHHCCEEEECCCCCCCCCCCCEEECCEEEEEC >Mature Secondary Structure PRLRLMSSALVGGLFLGVAPVLAQEAPRANIDAQIDQAFGAVLGNPANLQIGRTYAGLL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEECCEEEEEE VEGGNFEGAIAALERLLLDPAADPSIRVELGILYYRVGSYGMAESYLTTALADPRVSGQV EECCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCC RDDAEKLLRDVKRRNAPGGKLSGAVSIGLRGQTNPTAASSAGSLSYGGTRVAIPEQSRRN HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCHHCCC GDFDVFLNAGANHEWDLETQNSATVVTTGALFANHYGNAEGYDSDSVKNDPQDLVALNAT CCEEEEEECCCCCCCCCCCCCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCCCEEEEECC TGIRFKPSPADVPDLTLRPYIGASELLLSGNQYMASAGGGLDIAYAFNGGATLVGATYDI CCCEECCCCCCCCCCEECCCCCHHHHEECCCEEEEECCCCEEEEEEECCCEEEEECHHHH RRTFFEERADISESGGQSGYEQYLQLNAVQEVAPLNIVSLNLTLRDHNADRPYFDYQGVE HHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCCE ARVSYGLSYRNPLGWDEGFWTSSVYGGPVWRAYQGPDPVVDPARTRKDVEWRVGASQAVP EEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHCCCCCEEEECCCCCCC ITQAVSFLLGVEYTTTDSNLPNYSYNNFMASSSFVFNF HHHHHHHHHCCEEEECCCCCCCCCCCCEEECCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA