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The map label for this gene is nifU [H]

Identifier: 83593605

GI number: 83593605

Start: 2630304

End: 2630603

Strand: Reverse

Name: nifU [H]

Synonym: Rru_A2270

Alternate gene names: 83593605

Gene position: 2630603-2630304 (Counterclockwise)

Preceding gene: 83593606

Following gene: 83593604

Centisome position: 60.43

GC content: 66.33

Gene sequence:

>300_bases
ATGTCCCAGCAGGCGTTTGAAGCCAAGGTGGCCGAAGTCCTGGAAACGGTGATCCGGCCGCGTCTGCGCCGCGATAATGG
CGATATCGAGTTGGTGCGCATCGAAGATCACAAGATCTTCGTCACGCTGACCGGCGCCTGTGTCGGCTGCCAGCTTTCCA
GCATCACGCTGTCGGGGATCCAGCAAAAGCTGATGGAGGCCGTGGGCCGCCCGGTGCGGGTCATCCCCGCCCATGCCGTG
CCCTGGGCCGGTCAGCCCCCGGTCAAAGCCGCCGCTGCCGCCACCGCGGCCTTGGCCTGA

Upstream 100 bases:

>100_bases
TGCGCTCAACACCTGCAGCTGCGGCAAGTCGTTTTCCGCCGCGACCTGTTGAGCGGCCTCCGGGCTTTTCCCCCGTCTTT
ATTTTTTTAGGAGTGATGCC

Downstream 100 bases:

>100_bases
GGCGGACGGGCGGGGAGGATCGGAAGATGGATTGGTCATCGGTCATCGTCAACGATACCACGCTGCGCGACGGCGAGCAG
ACCGCCGGGGTGATCTTCAC

Product: nitrogen-fixing NifU-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MSQQAFEAKVAEVLETVIRPRLRRDNGDIELVRIEDHKIFVTLTGACVGCQLSSITLSGIQQKLMEAVGRPVRVIPAHAV
PWAGQPPVKAAAAATAALA

Sequences:

>Translated_99_residues
MSQQAFEAKVAEVLETVIRPRLRRDNGDIELVRIEDHKIFVTLTGACVGCQLSSITLSGIQQKLMEAVGRPVRVIPAHAV
PWAGQPPVKAAAAATAALA
>Mature_98_residues
SQQAFEAKVAEVLETVIRPRLRRDNGDIELVRIEDHKIFVTLTGACVGCQLSSITLSGIQQKLMEAVGRPVRVIPAHAVP
WAGQPPVKAAAAATAALA

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001075
- InterPro:   IPR002871
- ProDom:   PD002830 [H]

Pfam domain/function: PF01106 NifU; PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 10554; Mature: 10423

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQQAFEAKVAEVLETVIRPRLRRDNGDIELVRIEDHKIFVTLTGACVGCQLSSITLSGI
CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCEECCEEHHHHHHHH
QQKLMEAVGRPVRVIPAHAVPWAGQPPVKAAAAATAALA
HHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SQQAFEAKVAEVLETVIRPRLRRDNGDIELVRIEDHKIFVTLTGACVGCQLSSITLSGI
CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCEECCEEHHHHHHHH
QQKLMEAVGRPVRVIPAHAVPWAGQPPVKAAAAATAALA
HHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1317839 [H]