| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is paaG [H]
Identifier: 83593575
GI number: 83593575
Start: 2600660
End: 2601478
Strand: Reverse
Name: paaG [H]
Synonym: Rru_A2240
Alternate gene names: 83593575
Gene position: 2601478-2600660 (Counterclockwise)
Preceding gene: 83593576
Following gene: 83593574
Centisome position: 59.77
GC content: 69.72
Gene sequence:
>819_bases ATGGCCGATCCCGCGACTTCCCTTGCCAGTCCGCTTGATACGCGTCGTCACGGCGGCGTGCTGGTTTTGACGATGAACGA TCCGGCCACCCGCAACGCCCTCAGTCCGACGGTGTTCGCCGCCGGCACCCGCGCCCTGGCCGAAGCGGCGGACGATGACG GCATCGGCGCCGTGGTGCTGACGGGGGCGAATGGGGCGTTTTGTTCGGGGGGCGATCTGCGGCTGCTGGCCGGGGCGCCC AGCGACATCACCGCCTTGCTCGACTCGTTTCACGGCTTCGTCCGCGCCATCCGCGCCTTGCCGCTGCCGGTGATCGCCGC CGTCGAGGGATCGGCGGCCGGCGCTGGGTTTTCGCTGGCTTTGGGCTGCGACCTGCTGGTCGCCTCACGCGAGGCCAGCT TCCTGATGGCCTATATCAAGGTCGGTCTCACCCCCGATGGCGGGGCGACGGCTTTCCTCGCCCGCGCCCTGCCGCGCGCC CTTCAAACCGAGATCGTCCTGACCGGCGCGCCGGTTTCGGCCGAGCGCCTGCATGGCTTGGGCGTGGTCAACCGCCTTGT CGAGCCCGGAACGGCCTGTGAGGCCGCCTTGGCCTGGGCCGCGGCCTTCGCCGCCGGCCCGCGCGCCGCCCTCGGCCGAG CCAAGCGTTTGGTCGAGGCGGCCGGCTCCAATGACTTGGAAGGTCAGCTTGATCTGGAGGCCGCGCTGTTTAGCCAAGCG ATCGCCCATGGCGAAGCCCGCGAGGGGATGACCGCCTTTTTGCACAAGCGCAGCCCCGATTTCGCCGCCGCGCGCGGCCG GATGGGTCAAAAGATTTAA
Upstream 100 bases:
>100_bases GCGCCGTGATCGCGACCCCAGGCTCCCGTCGGGGTTGTTAAAAGGCCTCGCCGGACAAGAACTTTGCGCTACCATGGGGG CTCCATCAACGGAGGACCCC
Downstream 100 bases:
>100_bases AAATTTCTCAATGACAGGGGTGGACGCAGCTTTGTACCATCCCGCCTTCGGAAAACAGACCAAAAACCACCGAAGGGACA GTCCATGAGAAAGCTATTCA
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MADPATSLASPLDTRRHGGVLVLTMNDPATRNALSPTVFAAGTRALAEAADDDGIGAVVLTGANGAFCSGGDLRLLAGAP SDITALLDSFHGFVRAIRALPLPVIAAVEGSAAGAGFSLALGCDLLVASREASFLMAYIKVGLTPDGGATAFLARALPRA LQTEIVLTGAPVSAERLHGLGVVNRLVEPGTACEAALAWAAAFAAGPRAALGRAKRLVEAAGSNDLEGQLDLEAALFSQA IAHGEAREGMTAFLHKRSPDFAAARGRMGQKI
Sequences:
>Translated_272_residues MADPATSLASPLDTRRHGGVLVLTMNDPATRNALSPTVFAAGTRALAEAADDDGIGAVVLTGANGAFCSGGDLRLLAGAP SDITALLDSFHGFVRAIRALPLPVIAAVEGSAAGAGFSLALGCDLLVASREASFLMAYIKVGLTPDGGATAFLARALPRA LQTEIVLTGAPVSAERLHGLGVVNRLVEPGTACEAALAWAAAFAAGPRAALGRAKRLVEAAGSNDLEGQLDLEAALFSQA IAHGEAREGMTAFLHKRSPDFAAARGRMGQKI >Mature_271_residues ADPATSLASPLDTRRHGGVLVLTMNDPATRNALSPTVFAAGTRALAEAADDDGIGAVVLTGANGAFCSGGDLRLLAGAPS DITALLDSFHGFVRAIRALPLPVIAAVEGSAAGAGFSLALGCDLLVASREASFLMAYIKVGLTPDGGATAFLARALPRAL QTEIVLTGAPVSAERLHGLGVVNRLVEPGTACEAALAWAAAFAAGPRAALGRAKRLVEAAGSNDLEGQLDLEAALFSQAI AHGEAREGMTAFLHKRSPDFAAARGRMGQKI
Specific function: Could possibly oxidize fatty acids using specific components [H]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=246, Percent_Identity=32.9268292682927, Blast_Score=122, Evalue=3e-28, Organism=Homo sapiens, GI31542718, Length=256, Percent_Identity=30.078125, Blast_Score=101, Evalue=9e-22, Organism=Homo sapiens, GI221136756, Length=252, Percent_Identity=25.7936507936508, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI221136753, Length=252, Percent_Identity=25.7936507936508, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI221307494, Length=252, Percent_Identity=25.7936507936508, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI116235487, Length=248, Percent_Identity=25.8064516129032, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI4502327, Length=250, Percent_Identity=28.4, Blast_Score=88, Evalue=9e-18, Organism=Homo sapiens, GI4757968, Length=253, Percent_Identity=23.7154150197628, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI49355787, Length=253, Percent_Identity=23.7154150197628, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI25453481, Length=253, Percent_Identity=23.3201581027668, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI51538573, Length=253, Percent_Identity=23.3201581027668, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI20127408, Length=195, Percent_Identity=29.2307692307692, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI68989263, Length=196, Percent_Identity=30.6122448979592, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI4757966, Length=242, Percent_Identity=23.9669421487603, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI51538581, Length=242, Percent_Identity=23.9669421487603, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI260274832, Length=248, Percent_Identity=25.4032258064516, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI45643119, Length=247, Percent_Identity=25.5060728744939, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI260275230, Length=247, Percent_Identity=25.5060728744939, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI70995211, Length=199, Percent_Identity=27.6381909547739, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI213417737, Length=199, Percent_Identity=25.1256281407035, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI157694516, Length=199, Percent_Identity=25.1256281407035, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1787660, Length=248, Percent_Identity=39.1129032258064, Blast_Score=131, Evalue=4e-32, Organism=Escherichia coli, GI1787659, Length=259, Percent_Identity=35.5212355212355, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1788597, Length=257, Percent_Identity=32.295719844358, Blast_Score=114, Evalue=8e-27, Organism=Escherichia coli, GI221142681, Length=258, Percent_Identity=31.3953488372093, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI87082183, Length=253, Percent_Identity=25.296442687747, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1788682, Length=191, Percent_Identity=26.7015706806283, Blast_Score=65, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17554946, Length=243, Percent_Identity=31.2757201646091, Blast_Score=107, Evalue=9e-24, Organism=Caenorhabditis elegans, GI25145438, Length=246, Percent_Identity=29.2682926829268, Blast_Score=102, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17540714, Length=243, Percent_Identity=30.0411522633745, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17560910, Length=202, Percent_Identity=28.2178217821782, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17540306, Length=260, Percent_Identity=30.7692307692308, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17535521, Length=253, Percent_Identity=22.9249011857708, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17558304, Length=195, Percent_Identity=24.6153846153846, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17549921, Length=217, Percent_Identity=27.1889400921659, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI25144276, Length=182, Percent_Identity=28.021978021978, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17508953, Length=183, Percent_Identity=27.8688524590164, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17508951, Length=182, Percent_Identity=28.021978021978, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17536985, Length=230, Percent_Identity=23.4782608695652, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24653139, Length=265, Percent_Identity=31.3207547169811, Blast_Score=117, Evalue=7e-27, Organism=Drosophila melanogaster, GI24654903, Length=250, Percent_Identity=27.2, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI20129971, Length=240, Percent_Identity=29.1666666666667, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI24653477, Length=240, Percent_Identity=29.1666666666667, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI19922422, Length=254, Percent_Identity=25.5905511811024, Blast_Score=94, Evalue=7e-20, Organism=Drosophila melanogaster, GI21357171, Length=251, Percent_Identity=30.2788844621514, Blast_Score=81, Evalue=9e-16, Organism=Drosophila melanogaster, GI24650670, Length=194, Percent_Identity=30.4123711340206, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR011968 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 27545; Mature: 27414
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADPATSLASPLDTRRHGGVLVLTMNDPATRNALSPTVFAAGTRALAEAADDDGIGAVVL CCCCHHHHHCCHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEE TGANGAFCSGGDLRLLAGAPSDITALLDSFHGFVRAIRALPLPVIAAVEGSAAGAGFSLA ECCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEE LGCDLLVASREASFLMAYIKVGLTPDGGATAFLARALPRALQTEIVLTGAPVSAERLHGL CCCEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHH GVVNRLVEPGTACEAALAWAAAFAAGPRAALGRAKRLVEAAGSNDLEGQLDLEAALFSQA HHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH IAHGEAREGMTAFLHKRSPDFAAARGRMGQKI HHCCCHHCCHHHHHHCCCCCHHHHHCCCCCCC >Mature Secondary Structure ADPATSLASPLDTRRHGGVLVLTMNDPATRNALSPTVFAAGTRALAEAADDDGIGAVVL CCCHHHHHCCHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEE TGANGAFCSGGDLRLLAGAPSDITALLDSFHGFVRAIRALPLPVIAAVEGSAAGAGFSLA ECCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEE LGCDLLVASREASFLMAYIKVGLTPDGGATAFLARALPRALQTEIVLTGAPVSAERLHGL CCCEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHH GVVNRLVEPGTACEAALAWAAAFAAGPRAALGRAKRLVEAAGSNDLEGQLDLEAALFSQA HHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH IAHGEAREGMTAFLHKRSPDFAAARGRMGQKI HHCCCHHCCHHHHHHCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9097039; 9278503; 10766858 [H]