| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83593498
Identifier: 83593498
GI number: 83593498
Start: 2512365
End: 2513051
Strand: Reverse
Name: 83593498
Synonym: Rru_A2163
Alternate gene names: NA
Gene position: 2513051-2512365 (Counterclockwise)
Preceding gene: 83593499
Following gene: 83593496
Centisome position: 57.73
GC content: 71.47
Gene sequence:
>687_bases ATGAGCGCCGGGGTGCAGCTTCCGCTGGATCTGCCCTGGCGGCCGGCCCTGGGGCGCGAACATTTTCTGGTGGCCGCCTG CAATGCCAGCGCCGTCGCTCTGGTCGAGGCCTGGCCCCATTGGCCAGCCCCGGCGGCCTGCATCCATGGGCCGACGGGGG CGGGAAAAACCCATCTCGCCCAGGTTTTCGCCACCCGGGCGGCGGCGGTGGTGCTTGACCCCGCCGTTATCCTAGGTACC GATCCGCTGACCCTGTTCGAGGGGGGGCGGGCGGCGGTGATCGAGGACGCCGACCGCGCCGGGCTGCCCGAGGCGACGCT GTTCCATCTGCTCAACGCCGCCCGCCAAAGGGGCGGATCGCTGCTGCTGACCGCCCTGTCGCCGCCGGCGCGCTGGGGCG TCCATCTGGCCGATCTGCGCTCGCGGCTGGCCGCCCTGCCGGCCGAAGGGCTGTGCGAGCCCGATGACGAGCTGATGGCC GCCGTTCTGCTCAAGCTGTTTTCCGATCGCGGGCTTGATGTTGCCCCCGGCGCCATCGGCTATTTGCTGCCGCGCATGGA GCGCAGCTTCGCCGCCGCCCGCGATCTGGTGGTCCATGCCGACGCCCTGGCCCTGCGCGAAGGGCGGGCGGTGACCGTGC CGCTGCTTAGGCAACTGCTGGCTACTCCAGATCGCGCGGACAGGTGA
Upstream 100 bases:
>100_bases GCTTCTTCCTGGGCCGCTATCTCAACAGCCCGCTTTATACCGGAGCCACCCCGGAAGCCCCGGCCGTGACTCGGGTCCCC CCGGACAACGGGGCGCCTGA
Downstream 100 bases:
>100_bases ACGCCGTCAGGCGGGCGCAGGCGGCCTCCAGATCCGACCACGGTCGGCCGATCGCCAATTCGGCCAGGGCGCCGGTGGGG AATTTGTCCCTGGCCTTGGC
Product: regulatory inactivation of DnaA Hda protein
Products: NA
Alternate protein names: DNA Replication Initiation ATPase; DNAA-Related Protein; Regulatory Inactivation Of DNAA Hda Protein; DNA Replication Initiation Factor; Chromosomal Replication Initiator Protein DNAA; DNAA-Like Protein; ATPase; Chromosomal Replication Initiator; Chromosomal DNA Replication Initiator-Related Protein; DNAA Regulatory Inactivator Hda; ATPase Involved In DNA Replication Initiation; Chromosomal Replication Initiator DNAa; DNA Replication Initiation ATPase Protein; DNAA Regulatory Inactivator Hda Protein; DNAA-Like Protein Hda
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MSAGVQLPLDLPWRPALGREHFLVAACNASAVALVEAWPHWPAPAACIHGPTGAGKTHLAQVFATRAAAVVLDPAVILGT DPLTLFEGGRAAVIEDADRAGLPEATLFHLLNAARQRGGSLLLTALSPPARWGVHLADLRSRLAALPAEGLCEPDDELMA AVLLKLFSDRGLDVAPGAIGYLLPRMERSFAAARDLVVHADALALREGRAVTVPLLRQLLATPDRADR
Sequences:
>Translated_228_residues MSAGVQLPLDLPWRPALGREHFLVAACNASAVALVEAWPHWPAPAACIHGPTGAGKTHLAQVFATRAAAVVLDPAVILGT DPLTLFEGGRAAVIEDADRAGLPEATLFHLLNAARQRGGSLLLTALSPPARWGVHLADLRSRLAALPAEGLCEPDDELMA AVLLKLFSDRGLDVAPGAIGYLLPRMERSFAAARDLVVHADALALREGRAVTVPLLRQLLATPDRADR >Mature_227_residues SAGVQLPLDLPWRPALGREHFLVAACNASAVALVEAWPHWPAPAACIHGPTGAGKTHLAQVFATRAAAVVLDPAVILGTD PLTLFEGGRAAVIEDADRAGLPEATLFHLLNAARQRGGSLLLTALSPPARWGVHLADLRSRLAALPAEGLCEPDDELMAA VLLKLFSDRGLDVAPGAIGYLLPRMERSFAAARDLVVHADALALREGRAVTVPLLRQLLATPDRADR
Specific function: Unknown
COG id: COG0593
COG function: function code L; ATPase involved in DNA replication initiation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24043; Mature: 23912
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGVQLPLDLPWRPALGREHFLVAACNASAVALVEAWPHWPAPAACIHGPTGAGKTHLA CCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHCCCCCCCCHHHHH QVFATRAAAVVLDPAVILGTDPLTLFEGGRAAVIEDADRAGLPEATLFHLLNAARQRGGS HHHHHHHHHHEECCEEEECCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCC LLLTALSPPARWGVHLADLRSRLAALPAEGLCEPDDELMAAVLLKLFSDRGLDVAPGAIG EEEEECCCCHHHCEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHH YLLPRMERSFAAARDLVVHADALALREGRAVTVPLLRQLLATPDRADR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCCC >Mature Secondary Structure SAGVQLPLDLPWRPALGREHFLVAACNASAVALVEAWPHWPAPAACIHGPTGAGKTHLA CCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHCCCCCCCCHHHHH QVFATRAAAVVLDPAVILGTDPLTLFEGGRAAVIEDADRAGLPEATLFHLLNAARQRGGS HHHHHHHHHHEECCEEEECCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCC LLLTALSPPARWGVHLADLRSRLAALPAEGLCEPDDELMAAVLLKLFSDRGLDVAPGAIG EEEEECCCCHHHCEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHH YLLPRMERSFAAARDLVVHADALALREGRAVTVPLLRQLLATPDRADR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA