| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is ppk [H]
Identifier: 83593496
GI number: 83593496
Start: 2509471
End: 2511735
Strand: Reverse
Name: ppk [H]
Synonym: Rru_A2161
Alternate gene names: 83593496
Gene position: 2511735-2509471 (Counterclockwise)
Preceding gene: 83593498
Following gene: 83593495
Centisome position: 57.7
GC content: 63.36
Gene sequence:
>2265_bases ATGACCTCCGCTCCGCCGCCCCCCGCCGTCGAAGCCATCCAGGGTGTTGCCGCCCAGGATGTCGCCCCGCGGACCCGTCA GGGGGTCAAACCGACGGCGGCGGCCTCTGGCGATCACCCCGAGGCGCCGGTGATCACCATGGACATGCCCGATCGCTTCA TCAATCGCGAGGTCTCGTGGCTGGCCTTCAATTTCCGGGTGATGGAGGAGGCGCGCAATACCCGCCATCCCTTGATGGAG CGGCTGCGCTTCCTGTCGATTTCCGGCTCCAACCTCGACGAGTTCTATATGGTGCGCGTCGCCGGGCTGAAGGGGCAGGT CGAGGCCGGGGTGAACAAGGTCAGCCAGGATGGGCTGACCCCGGCCCAGCAGCTGACCGAGATCAATCAGGCCGCCCGCC AGCTTCTGGAAGAGCAGCAGGTGGCCTGGGAAATCCTCCATGACGAACTGGCCGCCCAGGGCATCACCGTGGTTACCCCG GGCCAGTTGTCCAAGGCCGACCGGGTGTGGCTCGATACCTATTTCATGGGGCAGGTCTTCCCGGTTCTGACGCCGCTGGC CATCGATCCGGCCCATCCCTTTCCGTTCATTCCCAATCTGGGCCATGCCCTGGTGCTGCAGCTCCATCGTCCCAACGACG ACACCAGCCTGCGCGCCCTGGTGCCCTTGCCCAATCACGTCAGCCGCTTCACCCGCCTGCCTTCGGAAGAGGGGCAGGGG GCGCGCTATATTTTCCTGGAAGACATGGTCGGGCTGCATCTCGACCGGCTGTTCCCCGGCTTCAAGGTCAGCCAGGGCGG GCACTTCCGGGTCATTCGCGATTCCGAAATGGAAATCGACGAAGAGGCCGAGGATCTGGTGATGAGCTTCGAATCGGCGC TCAAGCGCCGGCGGCGCGGCCATTGCATCCGCCTGACCCTCAACGCCAATATGCCCGAGGAGCTGGTCAAGCTGATCTGC GACGAGATGGACGTCGCCGAGGAGGATATCTTCAAGGTGCGCGGGCCGATCGGTCAGGCCGACCTCAAGCAGCTGATCTC CGATGACCGCCCCGATCTGCAGTTCACCCCCTATACCGCCCGCTTCCCCGAGCGCATCCGCGACTTCGGCGGCGATTGCT TCGCCGCGATCCGCAAGAAGGACATCATCGTCCACCACCCCTATGAATCCTTCGATGTGGTGGTGCAGTTCCTGCGTCAG GCGGCGCGCGATCCCAATGTGCTGTCGATCAAGCAGACGCTCTATCGCACGTCGAATAATTCCTCGATCGTCGCGGCCCT GGTCGAGGCGGCCGAGGCCGGGAAGTCGGTCACCGCGATGGTCGAGTTGAAGGCCCGCTTCGATGAGGAGGCCAATATCC GCTGGGCCCGCGATCTGGAACGCTCGGGCGCCAATGTCGTCTATGGCTTCATGGATCTGAAGACCCACGCCAAGATCTCG CTGGTGGTGCGCCGGGAAAGCGGCGGCGAGCTGCGGTCCTATGTTCACTTCGGAACGGGCAATTACCATCCGATCACCGC CAAGATCTATACGGATCTTTCCTATTTCACCTCCGACGAGAAGCTGTGCCAGGACGCCGCCCGCGCCTTCAACTACATGA CCGGCTATGCCCGCCCGGGCGAGATGGAAAAGCTGCGCATCGCGCCTTTGGGGCTGAAGGAATACCTGCTCGAACGCATC CAGGCCGAAGAGGATCACGCGCGCGCCGGGCGGCCGGGAACCATCTGGGCCAAGCTCAACGCCCTGGTCGATCCCGATGT CATCGACGCCCTTTATCGCGCCTCGCAGGCCGGGGTGCGCATCGATCTGGTGGTGCGCGGTATCTGCTGCCTGCGTCCCG GCGTGGCCGGGCTGTCGTCGACCATCCGGGTGAAGTCGATCGTCGGCCGCTTCCTCGAGCATTCGCGCATCGCCTGTTTT GGCAATGGCAAGCCGCTGCCCGGACCCGATGCCCTGGTCTATATCTCCTCGGCCGACTGGATGCCGCGCAACCTCAATCG TCGCGTCGAGTCTTTCGTCCCCATCGAAAACCCGACGGTGAAGGCCCAGGTTCTTAACCAGATCATGGTGGCCAATCTCA ATGATCGGGCCCAGTCGTGGTATCTGACCGCCGATGGCGTCTTCCGCCGGGCCAAGGCCTCGGATGACGCCTTCTCGGCC CATACCTATTTCATGACCAACCCGAGTCTGTCGGGACGGGGATCCGCGCTCAATGACCCTGAAAAGGACATTCCTACCCT GGAGGTTTCAGCTCAGAGGAACTAA
Upstream 100 bases:
>100_bases GGCCGGGGGCCCTGTCGTACAAAGGACCCGAGGAGTCCGCCTCCTTTGGGTTTTGCCGGGCCCGCGTTCATCATCTCAAG GAAAAAGAAGGGAAGCCAGC
Downstream 100 bases:
>100_bases GGTGCCGACCCCAGAGACCGGTACCGGATCCCTTGCTGACATGACTGCGTCCGCCGCCTTCCCGCATGTTCCGGCCGCCC CGGTGGATCTTCGTCCGCTC
Product: polyphosphate kinase
Products: NA
Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase [H]
Number of amino acids: Translated: 754; Mature: 753
Protein sequence:
>754_residues MTSAPPPPAVEAIQGVAAQDVAPRTRQGVKPTAAASGDHPEAPVITMDMPDRFINREVSWLAFNFRVMEEARNTRHPLME RLRFLSISGSNLDEFYMVRVAGLKGQVEAGVNKVSQDGLTPAQQLTEINQAARQLLEEQQVAWEILHDELAAQGITVVTP GQLSKADRVWLDTYFMGQVFPVLTPLAIDPAHPFPFIPNLGHALVLQLHRPNDDTSLRALVPLPNHVSRFTRLPSEEGQG ARYIFLEDMVGLHLDRLFPGFKVSQGGHFRVIRDSEMEIDEEAEDLVMSFESALKRRRRGHCIRLTLNANMPEELVKLIC DEMDVAEEDIFKVRGPIGQADLKQLISDDRPDLQFTPYTARFPERIRDFGGDCFAAIRKKDIIVHHPYESFDVVVQFLRQ AARDPNVLSIKQTLYRTSNNSSIVAALVEAAEAGKSVTAMVELKARFDEEANIRWARDLERSGANVVYGFMDLKTHAKIS LVVRRESGGELRSYVHFGTGNYHPITAKIYTDLSYFTSDEKLCQDAARAFNYMTGYARPGEMEKLRIAPLGLKEYLLERI QAEEDHARAGRPGTIWAKLNALVDPDVIDALYRASQAGVRIDLVVRGICCLRPGVAGLSSTIRVKSIVGRFLEHSRIACF GNGKPLPGPDALVYISSADWMPRNLNRRVESFVPIENPTVKAQVLNQIMVANLNDRAQSWYLTADGVFRRAKASDDAFSA HTYFMTNPSLSGRGSALNDPEKDIPTLEVSAQRN
Sequences:
>Translated_754_residues MTSAPPPPAVEAIQGVAAQDVAPRTRQGVKPTAAASGDHPEAPVITMDMPDRFINREVSWLAFNFRVMEEARNTRHPLME RLRFLSISGSNLDEFYMVRVAGLKGQVEAGVNKVSQDGLTPAQQLTEINQAARQLLEEQQVAWEILHDELAAQGITVVTP GQLSKADRVWLDTYFMGQVFPVLTPLAIDPAHPFPFIPNLGHALVLQLHRPNDDTSLRALVPLPNHVSRFTRLPSEEGQG ARYIFLEDMVGLHLDRLFPGFKVSQGGHFRVIRDSEMEIDEEAEDLVMSFESALKRRRRGHCIRLTLNANMPEELVKLIC DEMDVAEEDIFKVRGPIGQADLKQLISDDRPDLQFTPYTARFPERIRDFGGDCFAAIRKKDIIVHHPYESFDVVVQFLRQ AARDPNVLSIKQTLYRTSNNSSIVAALVEAAEAGKSVTAMVELKARFDEEANIRWARDLERSGANVVYGFMDLKTHAKIS LVVRRESGGELRSYVHFGTGNYHPITAKIYTDLSYFTSDEKLCQDAARAFNYMTGYARPGEMEKLRIAPLGLKEYLLERI QAEEDHARAGRPGTIWAKLNALVDPDVIDALYRASQAGVRIDLVVRGICCLRPGVAGLSSTIRVKSIVGRFLEHSRIACF GNGKPLPGPDALVYISSADWMPRNLNRRVESFVPIENPTVKAQVLNQIMVANLNDRAQSWYLTADGVFRRAKASDDAFSA HTYFMTNPSLSGRGSALNDPEKDIPTLEVSAQRN >Mature_753_residues TSAPPPPAVEAIQGVAAQDVAPRTRQGVKPTAAASGDHPEAPVITMDMPDRFINREVSWLAFNFRVMEEARNTRHPLMER LRFLSISGSNLDEFYMVRVAGLKGQVEAGVNKVSQDGLTPAQQLTEINQAARQLLEEQQVAWEILHDELAAQGITVVTPG QLSKADRVWLDTYFMGQVFPVLTPLAIDPAHPFPFIPNLGHALVLQLHRPNDDTSLRALVPLPNHVSRFTRLPSEEGQGA RYIFLEDMVGLHLDRLFPGFKVSQGGHFRVIRDSEMEIDEEAEDLVMSFESALKRRRRGHCIRLTLNANMPEELVKLICD EMDVAEEDIFKVRGPIGQADLKQLISDDRPDLQFTPYTARFPERIRDFGGDCFAAIRKKDIIVHHPYESFDVVVQFLRQA ARDPNVLSIKQTLYRTSNNSSIVAALVEAAEAGKSVTAMVELKARFDEEANIRWARDLERSGANVVYGFMDLKTHAKISL VVRRESGGELRSYVHFGTGNYHPITAKIYTDLSYFTSDEKLCQDAARAFNYMTGYARPGEMEKLRIAPLGLKEYLLERIQ AEEDHARAGRPGTIWAKLNALVDPDVIDALYRASQAGVRIDLVVRGICCLRPGVAGLSSTIRVKSIVGRFLEHSRIACFG NGKPLPGPDALVYISSADWMPRNLNRRVESFVPIENPTVKAQVLNQIMVANLNDRAQSWYLTADGVFRRAKASDDAFSAH TYFMTNPSLSGRGSALNDPEKDIPTLEVSAQRN
Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) [H]
COG id: COG0855
COG function: function code P; Polyphosphate kinase
Gene ontology:
Cell location: Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polyphosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788847, Length=662, Percent_Identity=36.1027190332326, Blast_Score=377, Evalue=1e-105,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003414 [H]
Pfam domain/function: PF02503 PP_kinase [H]
EC number: =2.7.4.1 [H]
Molecular weight: Translated: 84209; Mature: 84078
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAPPPPAVEAIQGVAAQDVAPRTRQGVKPTAAASGDHPEAPVITMDMPDRFINREVSW CCCCCCCCHHHHHHCCHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCHHHHCCCEEE LAFNFRVMEEARNTRHPLMERLRFLSISGSNLDEFYMVRVAGLKGQVEAGVNKVSQDGLT EEEHHHHHHHHHCCHHHHHHHHHEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCC PAQQLTEINQAARQLLEEQQVAWEILHDELAAQGITVVTPGQLSKADRVWLDTYFMGQVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHH PVLTPLAIDPAHPFPFIPNLGHALVLQLHRPNDDTSLRALVPLPNHVSRFTRLPSEEGQG HHHCCCEECCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHCCCCCCCCC ARYIFLEDMVGLHLDRLFPGFKVSQGGHFRVIRDSEMEIDEEAEDLVMSFESALKRRRRG CEEEEEHHHHHHHHHHHCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCC HCIRLTLNANMPEELVKLICDEMDVAEEDIFKVRGPIGQADLKQLISDDRPDLQFTPYTA CEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCEECCCHH RFPERIRDFGGDCFAAIRKKDIIVHHPYESFDVVVQFLRQAARDPNVLSIKQTLYRTSNN HHHHHHHHCCCHHHHHHHHCCEEEECCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCC SSIVAALVEAAEAGKSVTAMVELKARFDEEANIRWARDLERSGANVVYGFMDLKTHAKIS CHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCEEE LVVRRESGGELRSYVHFGTGNYHPITAKIYTDLSYFTSDEKLCQDAARAFNYMTGYARPG EEEEECCCCCEEHEEEECCCCCCEEEEEEEECHHHHCCHHHHHHHHHHHHHHHHCCCCCC EMEKLRIAPLGLKEYLLERIQAEEDHARAGRPGTIWAKLNALVDPDVIDALYRASQAGVR CCCEEEECCCCHHHHHHHHHCCCHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCE IDLVVRGICCLRPGVAGLSSTIRVKSIVGRFLEHSRIACFGNGKPLPGPDALVYISSADW EEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCCC MPRNLNRRVESFVPIENPTVKAQVLNQIMVANLNDRAQSWYLTADGVFRRAKASDDAFSA CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHCCCCCCCEE HTYFMTNPSLSGRGSALNDPEKDIPTLEVSAQRN EEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCC >Mature Secondary Structure TSAPPPPAVEAIQGVAAQDVAPRTRQGVKPTAAASGDHPEAPVITMDMPDRFINREVSW CCCCCCCHHHHHHCCHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCHHHHCCCEEE LAFNFRVMEEARNTRHPLMERLRFLSISGSNLDEFYMVRVAGLKGQVEAGVNKVSQDGLT EEEHHHHHHHHHCCHHHHHHHHHEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCC PAQQLTEINQAARQLLEEQQVAWEILHDELAAQGITVVTPGQLSKADRVWLDTYFMGQVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHH PVLTPLAIDPAHPFPFIPNLGHALVLQLHRPNDDTSLRALVPLPNHVSRFTRLPSEEGQG HHHCCCEECCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHCCCCCCCCC ARYIFLEDMVGLHLDRLFPGFKVSQGGHFRVIRDSEMEIDEEAEDLVMSFESALKRRRRG CEEEEEHHHHHHHHHHHCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCC HCIRLTLNANMPEELVKLICDEMDVAEEDIFKVRGPIGQADLKQLISDDRPDLQFTPYTA CEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCEECCCHH RFPERIRDFGGDCFAAIRKKDIIVHHPYESFDVVVQFLRQAARDPNVLSIKQTLYRTSNN HHHHHHHHCCCHHHHHHHHCCEEEECCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCC SSIVAALVEAAEAGKSVTAMVELKARFDEEANIRWARDLERSGANVVYGFMDLKTHAKIS CHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCEEE LVVRRESGGELRSYVHFGTGNYHPITAKIYTDLSYFTSDEKLCQDAARAFNYMTGYARPG EEEEECCCCCEEHEEEECCCCCCEEEEEEEECHHHHCCHHHHHHHHHHHHHHHHCCCCCC EMEKLRIAPLGLKEYLLERIQAEEDHARAGRPGTIWAKLNALVDPDVIDALYRASQAGVR CCCEEEECCCCHHHHHHHHHCCCHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCE IDLVVRGICCLRPGVAGLSSTIRVKSIVGRFLEHSRIACFGNGKPLPGPDALVYISSADW EEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCCC MPRNLNRRVESFVPIENPTVKAQVLNQIMVANLNDRAQSWYLTADGVFRRAKASDDAFSA CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHCCCCCCCEE HTYFMTNPSLSGRGSALNDPEKDIPTLEVSAQRN EEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA