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The map label for this gene is mcp1 [H]

Identifier: 83593481

GI number: 83593481

Start: 2489568

End: 2491025

Strand: Direct

Name: mcp1 [H]

Synonym: Rru_A2146

Alternate gene names: 83593481

Gene position: 2489568-2491025 (Clockwise)

Preceding gene: 83593480

Following gene: 83593484

Centisome position: 57.19

GC content: 66.6

Gene sequence:

>1458_bases
ATGAGCCGCGAAATAGCCCTCCTGCGGAAAGGCGTCTTACGCTTCTTCATCCCTTTTCTGCTTCTTCAGGTCGCTTTGGT
CGCCGTCGCCGGACTGATCACCGGGGCGGCCATGCTTGCCGGTTTGGCGGTCTCGGCGCTCTTCGCCGCGATCCCGGTCG
CGCTGATCTTCTTGGCCGGGGATAGTCCGGCCAGTAGAAGCGCCATCGGCGTCGGTTTGGTCATTCAGGTCGCGGTGCTG
GTTTTCATGTTTCGCGGCCATCCCTGGCAGATCGACATCCACCTGTATTTCTTCGCCGTTCTGGCCATCCTTGTGGTGCT
CTGCGACGCGAGGGTCATCCTTGCCGCGGCGCTGACCATCGCCGCCCACCACCTGATTTTGACCTACGCCATGCCGGCCT
GGGTCTTCCCCCCGGGTGCCGATCTCGGCCGGGTGGCCCTGCATGCGGCCATCGTCATCATTGAAACCGTGACCCTGGTT
TGGGTGATCGTGCGCATGACCACGTCGTTCGCCACCGCCGAACAGGCGGTGGTCGAGGCCAATACCGCCCGCGAAGATGC
CCGCAAGGTCGCCGAGGAGCGCTTGCGTCTGGAAGCCGCCGCCGCCGAGGCCCAGGTCACCGCCGTGCGCGGCGTCGCCG
ATGATCTCGAAGGGTCGGTCGGCACGGCTTTGGGCGCCCTGAAGGACGACAGCGCCACCATGCGCCGGGCGGCCGAAGCC
CTGAACGGATCGTCGGAAAGCTCGCGGCAGGTATCCTCGATGGCCCGCGATTTGTCCGAACGCACGGCCGAAGGCGTTGA
ATCGATGGCCCAGGCGGCGCGGACGATGACCCAATCGGTGTCGGGCATCCTTGAAAGCGTCCGTCACTCCGATGCCCTGT
CGCGCTCCGCCCTGACCGATACCGAACGGGCGACGGAAAAGGTCGCGGCGCTGAGCACGGCGGCCGAGCGGATCGGCGAG
GTGGTCGGGCTGATCAGCGCCGTCGCCGCCCAAACCAATCTGCTGGCCCTGAACGCGACGATCGAGGCGGCGCGGGCCGG
CGATGCCGGCAAGGGCTTCGCCGTGGTCGCCAATGAGGTGAAGACCCTGGCCACCCAAACGGCGCGGGCGACCGACGAGA
TCGCCGCCCAAGTGACCGGCATCCAGGGGGCGACCCGCGACTCAGCGGCCGTCATCGCCACCATCAGCCGCAGCATGACC
GATATCAGCGCCACCGTCTCGGCCATCGCCGCCGCCATGGAAGATCAGGGAAAAGCCAGTCAGTTGGTCGCCGGAACCAT
CGACGCGGTATCGTCCCTGGCCCATGAACTGGGCGAGGTGATCTCCCGCATGGATGGCCTGACCGGCGACTTCTCGGCCA
ATGCCGCCACCATGCGCGGTCTGTCCGATCACGCCGTCGACGAGATCGACCGCCTTGATCAGTCGGTGATCGCCTTCGTC
GGCCGCCTGCGCGCCTGA

Upstream 100 bases:

>100_bases
CCCCACCAGGCATCGCCTCTTTGACAACCATGGGCGTTCTTCTTGTTCTTGATCCGCTGGCGGCCCAAGGCTGCGCCCCC
CCAAGTGGAGACACGGCGCG

Downstream 100 bases:

>100_bases
CCCCGGCCCGCCAAAGGAGCGGTCTGAGAGCGGGAGGCGTAAAATCGGGTTCACGCCCCCCGCTCTAAACGTTCACTCTC
GGGGCGTTGGTCTAATAAAG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MSREIALLRKGVLRFFIPFLLLQVALVAVAGLITGAAMLAGLAVSALFAAIPVALIFLAGDSPASRSAIGVGLVIQVAVL
VFMFRGHPWQIDIHLYFFAVLAILVVLCDARVILAAALTIAAHHLILTYAMPAWVFPPGADLGRVALHAAIVIIETVTLV
WVIVRMTTSFATAEQAVVEANTAREDARKVAEERLRLEAAAAEAQVTAVRGVADDLEGSVGTALGALKDDSATMRRAAEA
LNGSSESSRQVSSMARDLSERTAEGVESMAQAARTMTQSVSGILESVRHSDALSRSALTDTERATEKVAALSTAAERIGE
VVGLISAVAAQTNLLALNATIEAARAGDAGKGFAVVANEVKTLATQTARATDEIAAQVTGIQGATRDSAAVIATISRSMT
DISATVSAIAAAMEDQGKASQLVAGTIDAVSSLAHELGEVISRMDGLTGDFSANAATMRGLSDHAVDEIDRLDQSVIAFV
GRLRA

Sequences:

>Translated_485_residues
MSREIALLRKGVLRFFIPFLLLQVALVAVAGLITGAAMLAGLAVSALFAAIPVALIFLAGDSPASRSAIGVGLVIQVAVL
VFMFRGHPWQIDIHLYFFAVLAILVVLCDARVILAAALTIAAHHLILTYAMPAWVFPPGADLGRVALHAAIVIIETVTLV
WVIVRMTTSFATAEQAVVEANTAREDARKVAEERLRLEAAAAEAQVTAVRGVADDLEGSVGTALGALKDDSATMRRAAEA
LNGSSESSRQVSSMARDLSERTAEGVESMAQAARTMTQSVSGILESVRHSDALSRSALTDTERATEKVAALSTAAERIGE
VVGLISAVAAQTNLLALNATIEAARAGDAGKGFAVVANEVKTLATQTARATDEIAAQVTGIQGATRDSAAVIATISRSMT
DISATVSAIAAAMEDQGKASQLVAGTIDAVSSLAHELGEVISRMDGLTGDFSANAATMRGLSDHAVDEIDRLDQSVIAFV
GRLRA
>Mature_484_residues
SREIALLRKGVLRFFIPFLLLQVALVAVAGLITGAAMLAGLAVSALFAAIPVALIFLAGDSPASRSAIGVGLVIQVAVLV
FMFRGHPWQIDIHLYFFAVLAILVVLCDARVILAAALTIAAHHLILTYAMPAWVFPPGADLGRVALHAAIVIIETVTLVW
VIVRMTTSFATAEQAVVEANTAREDARKVAEERLRLEAAAAEAQVTAVRGVADDLEGSVGTALGALKDDSATMRRAAEAL
NGSSESSRQVSSMARDLSERTAEGVESMAQAARTMTQSVSGILESVRHSDALSRSALTDTERATEKVAALSTAAERIGEV
VGLISAVAAQTNLLALNATIEAARAGDAGKGFAVVANEVKTLATQTARATDEIAAQVTGIQGATRDSAAVIATISRSMTD
ISATVSAIAAAMEDQGKASQLVAGTIDAVSSLAHELGEVISRMDGLTGDFSANAATMRGLSDHAVDEIDRLDQSVIAFVG
RLRA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=210, Percent_Identity=32.8571428571429, Blast_Score=96, Evalue=8e-21,
Organism=Escherichia coli, GI1787690, Length=263, Percent_Identity=31.5589353612167, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI2367378, Length=228, Percent_Identity=29.8245614035088, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1789453, Length=163, Percent_Identity=33.1288343558282, Blast_Score=85, Evalue=8e-18,
Organism=Escherichia coli, GI1788195, Length=240, Percent_Identity=29.1666666666667, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 50344; Mature: 50213

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSREIALLRKGVLRFFIPFLLLQVALVAVAGLITGAAMLAGLAVSALFAAIPVALIFLAG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DSPASRSAIGVGLVIQVAVLVFMFRGHPWQIDIHLYFFAVLAILVVLCDARVILAAALTI
CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAHHLILTYAMPAWVFPPGADLGRVALHAAIVIIETVTLVWVIVRMTTSFATAEQAVVEA
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NTAREDARKVAEERLRLEAAAAEAQVTAVRGVADDLEGSVGTALGALKDDSATMRRAAEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHH
LNGSSESSRQVSSMARDLSERTAEGVESMAQAARTMTQSVSGILESVRHSDALSRSALTD
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TERATEKVAALSTAAERIGEVVGLISAVAAQTNLLALNATIEAARAGDAGKGFAVVANEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHCCCCCCCHHHHHHHH
KTLATQTARATDEIAAQVTGIQGATRDSAAVIATISRSMTDISATVSAIAAAMEDQGKAS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
QLVAGTIDAVSSLAHELGEVISRMDGLTGDFSANAATMRGLSDHAVDEIDRLDQSVIAFV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH
GRLRA
HHHCC
>Mature Secondary Structure 
SREIALLRKGVLRFFIPFLLLQVALVAVAGLITGAAMLAGLAVSALFAAIPVALIFLAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DSPASRSAIGVGLVIQVAVLVFMFRGHPWQIDIHLYFFAVLAILVVLCDARVILAAALTI
CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAHHLILTYAMPAWVFPPGADLGRVALHAAIVIIETVTLVWVIVRMTTSFATAEQAVVEA
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NTAREDARKVAEERLRLEAAAAEAQVTAVRGVADDLEGSVGTALGALKDDSATMRRAAEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHH
LNGSSESSRQVSSMARDLSERTAEGVESMAQAARTMTQSVSGILESVRHSDALSRSALTD
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TERATEKVAALSTAAERIGEVVGLISAVAAQTNLLALNATIEAARAGDAGKGFAVVANEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHCCCCCCCHHHHHHHH
KTLATQTARATDEIAAQVTGIQGATRDSAAVIATISRSMTDISATVSAIAAAMEDQGKAS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
QLVAGTIDAVSSLAHELGEVISRMDGLTGDFSANAATMRGLSDHAVDEIDRLDQSVIAFV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH
GRLRA
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]